| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692106
Identifier: 213692106
GI number: 213692106
Start: 1408273
End: 1408755
Strand: Direct
Name: 213692106
Synonym: Blon_1225
Alternate gene names: NA
Gene position: 1408273-1408755 (Clockwise)
Preceding gene: 213692105
Following gene: 213692107
Centisome position: 49.71
GC content: 62.94
Gene sequence:
>483_bases GTGGGCGCTAAAAGGCGGGGCGGGACCTGTCAAATTCCACGTCGGATGGAGCAATCACATACGGTGTGTTACGCGCGTGT CAGCTCGTCTGACCAGAAGGACGATTTGACACGTCAGGCCGACCGGTTGAAGGCGTTCGCCCTTGGCATGGGCGTCGAGA AGCCCGAGGTGGTCACGGAGACGGGTTCCGGCATGAACGACAAACGACGCAAGCTCAACCGGCTGTTATCCGACCCGACC GTCGGCACGCTGATCGTGGAGCATCGCGACCGGCTCGCCCGTATGAACATGGGACTGGTGGAGAGCGCGTTGAAGGCGCA GGGACGCCGAATCATCGTGGTGGATGACACGGAGCCGGACGACGATCTGGTGCGCGACATGACCGAGGTGCTGACCTCGT TCTGCGCGAGACTGTACGGGCGTCGTGCCGCCAAGCACCGTGCGGAGAAGGCGTTGGAGGCGATGCGCGATGAGCGCGTA TGA
Upstream 100 bases:
>100_bases CTGCAGCGCAGGCAATAGGCTATTCAGGTTCCTTGGCTGATCTTGAACACATTGCACCTACACTCCCGTTTTATCGGCGT AAACGTGCTGAATCCCTGTT
Downstream 100 bases:
>100_bases GGCCGTTAGGATTCGGCTCGACCCAACCCCACGGCAGACACGGCTGTTGGAGTCCCATGCGGGTGGTGCGCGTTTCGCGT ACAATCTGATGCTCGCGCAC
Product: Resolvase, N-terminal domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MGAKRRGGTCQIPRRMEQSHTVCYARVSSSDQKDDLTRQADRLKAFALGMGVEKPEVVTETGSGMNDKRRKLNRLLSDPT VGTLIVEHRDRLARMNMGLVESALKAQGRRIIVVDDTEPDDDLVRDMTEVLTSFCARLYGRRAAKHRAEKALEAMRDERV
Sequences:
>Translated_160_residues MGAKRRGGTCQIPRRMEQSHTVCYARVSSSDQKDDLTRQADRLKAFALGMGVEKPEVVTETGSGMNDKRRKLNRLLSDPT VGTLIVEHRDRLARMNMGLVESALKAQGRRIIVVDDTEPDDDLVRDMTEVLTSFCARLYGRRAAKHRAEKALEAMRDERV >Mature_159_residues GAKRRGGTCQIPRRMEQSHTVCYARVSSSDQKDDLTRQADRLKAFALGMGVEKPEVVTETGSGMNDKRRKLNRLLSDPTV GTLIVEHRDRLARMNMGLVESALKAQGRRIIVVDDTEPDDDLVRDMTEVLTSFCARLYGRRAAKHRAEKALEAMRDERV
Specific function: Unknown
COG id: COG2452
COG function: function code L; Predicted site-specific integrase-resolvase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR000551 - InterPro: IPR006119 - InterPro: IPR010093 [H]
Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]
EC number: NA
Molecular weight: Translated: 18058; Mature: 17927
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS00397 RECOMBINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAKRRGGTCQIPRRMEQSHTVCYARVSSSDQKDDLTRQADRLKAFALGMGVEKPEVVTE CCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEC TGSGMNDKRRKLNRLLSDPTVGTLIVEHRDRLARMNMGLVESALKAQGRRIIVVDDTEPD CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC DDLVRDMTEVLTSFCARLYGRRAAKHRAEKALEAMRDERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GAKRRGGTCQIPRRMEQSHTVCYARVSSSDQKDDLTRQADRLKAFALGMGVEKPEVVTE CCCCCCCCCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEC TGSGMNDKRRKLNRLLSDPTVGTLIVEHRDRLARMNMGLVESALKAQGRRIIVVDDTEPD CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC DDLVRDMTEVLTSFCARLYGRRAAKHRAEKALEAMRDERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]