Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692083

Identifier: 213692083

GI number: 213692083

Start: 1386808

End: 1387677

Strand: Direct

Name: 213692083

Synonym: Blon_1202

Alternate gene names: NA

Gene position: 1386808-1387677 (Clockwise)

Preceding gene: 213692082

Following gene: 213692084

Centisome position: 48.96

GC content: 68.16

Gene sequence:

>870_bases
ATGGTCATGGACAGGAACAACAGGAGCCACAAGCCGAAGGGCACACCCGACGGCGGCAGATTCGAGACGGGGGACACGGG
CGGCGCGTCGGGTGACGTGGCCGCGCCCGGCATGGATCCGGCCACGTGCCTGACCGTCCGGGGGTTTGACGATGCGAACC
GGCGCATGGACGGATGGTACGGGCGGCTGGCGGGCCTGGAGAAGTCGGGCGATGACCACGATATCCGGAGGATACGCGGA
TGGTCGGCCGCGTTCGACCGATGGCAGAGAATCCACGGGGACGAGGTGGGCGCGTTCGTCGCCCGGCGCGGCGATCTGAT
CTCGTCGGACAGGGAGGCGGCCGCGTTCATGCTCGCCCGCCGCGACGTGCTTCGCAAGACGTACCCCGAATTCGGCGAGC
TCGACCGGCGGGTCGACGGGGAGATCCGCAGGCTCGAACGGGAGCCGAAACCGTCGAGGGAGTACGTGGACGCGATCGAC
GCGTTCGAATCCTACAGCAGGACCCATGCGGACGAGATCGCCGCATACGAGGAGAAGCGCGGCAAGGAGCTGTCAAGCGC
CAGGGAGGCGGCCGCCTACATGCTCGCCAAGGCCGGGCTTCTCAACGAGTCGATCAGGCGGGGCAACATGCTCGCCTTGG
CGGACGAGCATGACTGGGGGGCGTTGGGCGACCGGATCGCGGAGGGGGATGGCGCGCAACAGTATTCCCATGCGCTCGCC
GGCCGTTACGGGCTCGATCCGGAACAGGAGCGGATCCTCATGGAGGACACGGACGCGCATCTCGGCGAGGAAAGAGACCC
GGGACAGGCGGCTCGGGAGATGGACCGGCGCTACCGTCTCGCCGCCCGGCTGCTCGGCAACATCGACTGA

Upstream 100 bases:

>100_bases
AAGTACGGGCTGACGATGACCGCTCGAGAGAAACAGCAGACCATCACCTACCTCGCGCAATGCGTGGCGGGCAAAAACCA
GTAGCAAAGGAGATTCGACC

Downstream 100 bases:

>100_bases
CGGGAAAGGGGATTGGGGGAATGGCTCAGCTGATCATCGGCGGCGAATGCACGACCCTGCGGGAGACGGACCCGGACACG
CTCGCGCTCATGGCCGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MVMDRNNRSHKPKGTPDGGRFETGDTGGASGDVAAPGMDPATCLTVRGFDDANRRMDGWYGRLAGLEKSGDDHDIRRIRG
WSAAFDRWQRIHGDEVGAFVARRGDLISSDREAAAFMLARRDVLRKTYPEFGELDRRVDGEIRRLEREPKPSREYVDAID
AFESYSRTHADEIAAYEEKRGKELSSAREAAAYMLAKAGLLNESIRRGNMLALADEHDWGALGDRIAEGDGAQQYSHALA
GRYGLDPEQERILMEDTDAHLGEERDPGQAAREMDRRYRLAARLLGNID

Sequences:

>Translated_289_residues
MVMDRNNRSHKPKGTPDGGRFETGDTGGASGDVAAPGMDPATCLTVRGFDDANRRMDGWYGRLAGLEKSGDDHDIRRIRG
WSAAFDRWQRIHGDEVGAFVARRGDLISSDREAAAFMLARRDVLRKTYPEFGELDRRVDGEIRRLEREPKPSREYVDAID
AFESYSRTHADEIAAYEEKRGKELSSAREAAAYMLAKAGLLNESIRRGNMLALADEHDWGALGDRIAEGDGAQQYSHALA
GRYGLDPEQERILMEDTDAHLGEERDPGQAAREMDRRYRLAARLLGNID
>Mature_289_residues
MVMDRNNRSHKPKGTPDGGRFETGDTGGASGDVAAPGMDPATCLTVRGFDDANRRMDGWYGRLAGLEKSGDDHDIRRIRG
WSAAFDRWQRIHGDEVGAFVARRGDLISSDREAAAFMLARRDVLRKTYPEFGELDRRVDGEIRRLEREPKPSREYVDAID
AFESYSRTHADEIAAYEEKRGKELSSAREAAAYMLAKAGLLNESIRRGNMLALADEHDWGALGDRIAEGDGAQQYSHALA
GRYGLDPEQERILMEDTDAHLGEERDPGQAAREMDRRYRLAARLLGNID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32328; Mature: 32328

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMDRNNRSHKPKGTPDGGRFETGDTGGASGDVAAPGMDPATCLTVRGFDDANRRMDGWY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
GRLAGLEKSGDDHDIRRIRGWSAAFDRWQRIHGDEVGAFVARRGDLISSDREAAAFMLAR
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCHHHHHHHHHH
RDVLRKTYPEFGELDRRVDGEIRRLEREPKPSREYVDAIDAFESYSRTHADEIAAYEEKR
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKELSSAREAAAYMLAKAGLLNESIRRGNMLALADEHDWGALGDRIAEGDGAQQYSHALA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHH
GRYGLDPEQERILMEDTDAHLGEERDPGQAAREMDRRYRLAARLLGNID
CCCCCCHHHHEEEHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVMDRNNRSHKPKGTPDGGRFETGDTGGASGDVAAPGMDPATCLTVRGFDDANRRMDGWY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
GRLAGLEKSGDDHDIRRIRGWSAAFDRWQRIHGDEVGAFVARRGDLISSDREAAAFMLAR
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCHHHHHHHHHH
RDVLRKTYPEFGELDRRVDGEIRRLEREPKPSREYVDAIDAFESYSRTHADEIAAYEEKR
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKELSSAREAAAYMLAKAGLLNESIRRGNMLALADEHDWGALGDRIAEGDGAQQYSHALA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHH
GRYGLDPEQERILMEDTDAHLGEERDPGQAAREMDRRYRLAARLLGNID
CCCCCCHHHHEEEHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA