Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is insQ [H]

Identifier: 213692061

GI number: 213692061

Start: 1363810

End: 1365132

Strand: Direct

Name: insQ [H]

Synonym: Blon_1179

Alternate gene names: 213692061

Gene position: 1363810-1365132 (Clockwise)

Preceding gene: 213692059

Following gene: 213692064

Centisome position: 48.14

GC content: 59.86

Gene sequence:

>1323_bases
ATGCGTTGGCTGTGCGACGGGTGGCGTTGCCGATACAACCAGTTGCGTTCCCGTAGAACCAAATGGGATAAAAACCTTGG
CATGAGCATTCCGTTGGGCGGGAAGCCGGACATGCGCTCCGACCGTCAGGTAAGACTGGAGTGCTCATGGTTCGCAGCCA
TCCCCGCAATGGTGCTGCAATCCCCGAACAGGATAGAGAACACGGACTGGTGGAGCGCGAACAAACGCCGCAAAACATTG
AAGAAGAAGCATCGGAACCCGGGCATGACGCCCCGGTTCAAAAAACGGCGTGACGACCTGTATTTCGTCTGCTGGCACAA
CAAGGGCGCGAACGCGAACTACCGTCAGTTGAACCGGCGTCACGGCGAGGTCGTCATCACCGGACAGAACCCCGGCGCAT
ATCGTCTGGACGGCCAACGGTGCCGGTACAGCATCCACATCCGCGTCCGCGTCAGCCAACCCATCCGCGACTATACGAGC
GTCGACGTGAACTGGACGAGACGAACACTCGTGTTCGTCAACGACCCGCTGCCGATAGGCCGTGAGCGCACGGGTGCGAT
GGTCGGATTGGACAGGGGTTGCGTCCACACGCTCGCCACGTCCGACAATCGTTTCATCGACCTCCCCAAAGACCGGTTGA
ACCATATCGACAAGGAGATACGCCGCCGTCAGAAGGCTCAGGCGCGACGAATCGCCATGTCCGGCGAAACCGTCAAACAA
TACCGGCGTCATGCGAGCCGCACCTACGAGCGTACCGGTCGGGAAATCAGCCGACTGTACGCGAAGGCACACCGCATCAT
AGACGACTGGCAGCACAAGACCACCAGCATGCTAGTCCGCGAATACGACCTCATCGTATTGGAAGACCTCAACCTGCAAG
GCATGAGCCGCAAAGCCAAGGCGAAACCAGACCCGGACAGGCCGGGCGCGTTTCTACCCAACGGACAGTCGGCGAAACGT
GAACTCAACCGCAGCCTACGCGCCGCAAGCCTCGCCGGAATCGTCGGCAAACTCGAATACAAGACCCGGCTGACCGGACG
AAACCGTCTCATATTCGTCAACCCCGCGTACACGTCGCAGACATGCAGCAAGTGCGGGCATTGCGCCAAGGAGAACCGCG
AAAGCCAAGCGGACTTCGAATGCAGGCAATGCCACGCGCGCATGAACGCTGACCTGAACGCGGCCAACAACATCCTCAAA
CGGGGATTGAACCATCTCCTCGGCTTGGACGAAGCCGGGCACGCCGAAACGGAGCCAGACGCCCAACCCGCCTATCGCGG
GAAGGACGCTTCCGCCATGACGTGCGAAACCTCAACACGATAA

Upstream 100 bases:

>100_bases
AGAAAGCGTGCAGATACGGGGAGCCGCCCCGTATCTCGGCATGTGCGTGGCCTCGGACGGACGGCAAATCCCCCTGTATT
CAACCAATCCCGACATAGTG

Downstream 100 bases:

>100_bases
CAACACGTGTTGGAATCCCGGTGTTTCAACACCGGGAGGACGTCAAGTAGCTCGTATCCGAACCGCCCATGATACCGTTT
CCCCTCCGTCATGGATCTCC

Product: transposase, IS605 OrfB family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MRWLCDGWRCRYNQLRSRRTKWDKNLGMSIPLGGKPDMRSDRQVRLECSWFAAIPAMVLQSPNRIENTDWWSANKRRKTL
KKKHRNPGMTPRFKKRRDDLYFVCWHNKGANANYRQLNRRHGEVVITGQNPGAYRLDGQRCRYSIHIRVRVSQPIRDYTS
VDVNWTRRTLVFVNDPLPIGRERTGAMVGLDRGCVHTLATSDNRFIDLPKDRLNHIDKEIRRRQKAQARRIAMSGETVKQ
YRRHASRTYERTGREISRLYAKAHRIIDDWQHKTTSMLVREYDLIVLEDLNLQGMSRKAKAKPDPDRPGAFLPNGQSAKR
ELNRSLRAASLAGIVGKLEYKTRLTGRNRLIFVNPAYTSQTCSKCGHCAKENRESQADFECRQCHARMNADLNAANNILK
RGLNHLLGLDEAGHAETEPDAQPAYRGKDASAMTCETSTR

Sequences:

>Translated_440_residues
MRWLCDGWRCRYNQLRSRRTKWDKNLGMSIPLGGKPDMRSDRQVRLECSWFAAIPAMVLQSPNRIENTDWWSANKRRKTL
KKKHRNPGMTPRFKKRRDDLYFVCWHNKGANANYRQLNRRHGEVVITGQNPGAYRLDGQRCRYSIHIRVRVSQPIRDYTS
VDVNWTRRTLVFVNDPLPIGRERTGAMVGLDRGCVHTLATSDNRFIDLPKDRLNHIDKEIRRRQKAQARRIAMSGETVKQ
YRRHASRTYERTGREISRLYAKAHRIIDDWQHKTTSMLVREYDLIVLEDLNLQGMSRKAKAKPDPDRPGAFLPNGQSAKR
ELNRSLRAASLAGIVGKLEYKTRLTGRNRLIFVNPAYTSQTCSKCGHCAKENRESQADFECRQCHARMNADLNAANNILK
RGLNHLLGLDEAGHAETEPDAQPAYRGKDASAMTCETSTR
>Mature_440_residues
MRWLCDGWRCRYNQLRSRRTKWDKNLGMSIPLGGKPDMRSDRQVRLECSWFAAIPAMVLQSPNRIENTDWWSANKRRKTL
KKKHRNPGMTPRFKKRRDDLYFVCWHNKGANANYRQLNRRHGEVVITGQNPGAYRLDGQRCRYSIHIRVRVSQPIRDYTS
VDVNWTRRTLVFVNDPLPIGRERTGAMVGLDRGCVHTLATSDNRFIDLPKDRLNHIDKEIRRRQKAQARRIAMSGETVKQ
YRRHASRTYERTGREISRLYAKAHRIIDDWQHKTTSMLVREYDLIVLEDLNLQGMSRKAKAKPDPDRPGAFLPNGQSAKR
ELNRSLRAASLAGIVGKLEYKTRLTGRNRLIFVNPAYTSQTCSKCGHCAKENRESQADFECRQCHARMNADLNAANNILK
RGLNHLLGLDEAGHAETEPDAQPAYRGKDASAMTCETSTR

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

Organism=Escherichia coli, GI288549314, Length=219, Percent_Identity=34.2465753424658, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095
- InterPro:   IPR021027 [H]

Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 50939; Mature: 50939

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLCDGWRCRYNQLRSRRTKWDKNLGMSIPLGGKPDMRSDRQVRLECSWFAAIPAMVLQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHC
SPNRIENTDWWSANKRRKTLKKKHRNPGMTPRFKKRRDDLYFVCWHNKGANANYRQLNRR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCCCCHHHHHHCC
HGEVVITGQNPGAYRLDGQRCRYSIHIRVRVSQPIRDYTSVDVNWTRRTLVFVNDPLPIG
CCCEEEECCCCCCEEECCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCC
RERTGAMVGLDRGCVHTLATSDNRFIDLPKDRLNHIDKEIRRRQKAQARRIAMSGETVKQ
CCCCCCEEECCCCHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
YRRHASRTYERTGREISRLYAKAHRIIDDWQHKTTSMLVREYDLIVLEDLNLQGMSRKAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
AKPDPDRPGAFLPNGQSAKRELNRSLRAASLAGIVGKLEYKTRLTGRNRLIFVNPAYTSQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHH
TCSKCGHCAKENRESQADFECRQCHARMNADLNAANNILKRGLNHLLGLDEAGHAETEPD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AQPAYRGKDASAMTCETSTR
CCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MRWLCDGWRCRYNQLRSRRTKWDKNLGMSIPLGGKPDMRSDRQVRLECSWFAAIPAMVLQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHC
SPNRIENTDWWSANKRRKTLKKKHRNPGMTPRFKKRRDDLYFVCWHNKGANANYRQLNRR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCCCCHHHHHHCC
HGEVVITGQNPGAYRLDGQRCRYSIHIRVRVSQPIRDYTSVDVNWTRRTLVFVNDPLPIG
CCCEEEECCCCCCEEECCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCC
RERTGAMVGLDRGCVHTLATSDNRFIDLPKDRLNHIDKEIRRRQKAQARRIAMSGETVKQ
CCCCCCEEECCCCHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
YRRHASRTYERTGREISRLYAKAHRIIDDWQHKTTSMLVREYDLIVLEDLNLQGMSRKAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
AKPDPDRPGAFLPNGQSAKRELNRSLRAASLAGIVGKLEYKTRLTGRNRLIFVNPAYTSQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHH
TCSKCGHCAKENRESQADFECRQCHARMNADLNAANNILKRGLNHLLGLDEAGHAETEPD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AQPAYRGKDASAMTCETSTR
CCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]