Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692064

Identifier: 213692064

GI number: 213692064

Start: 1367010

End: 1367885

Strand: Direct

Name: 213692064

Synonym: Blon_1182

Alternate gene names: NA

Gene position: 1367010-1367885 (Clockwise)

Preceding gene: 213692061

Following gene: 213692065

Centisome position: 48.26

GC content: 71.58

Gene sequence:

>876_bases
ATGGTGGTCGGCCGGATCGGCCCTCAACTGGTGGGACAGCCGCGTGGCCGACCCGCCCGCATGGCTCCCCGACCGGGAGA
AGGCGCTCGCATGGCTGGAACGGCATGCCCCCGTCACCGGGGCGGCGCTCGCGCTCATCCGCTCGCACAGGACCTGCGAG
ACAAGCCAACTCCACGAGCTCGACCCGAGACTGCCCGCCGACCCGCGGTCCACGCTGTGGATGATGCTCGCCGGCATGCG
CCTCATCGACCTGGGGTTCCCCATCAACGTGAACGGGCGCGGCGGATGGGGACCGAAAAGCGCGGGCTTCATGGCCGTCC
GCCTGCCCGTCCACCACGCGATCGACCCGGAGCTGCGCCGGCTGGGCCTCACGCCCGTCGAAATCGCGGACATCGGGCCG
GGGCCGTTGCGCGGGCAACGCCAGTACGACCGGCACAACCTGATCTGCACGGGGCTCGCCGTCCGCGCCCGGCGCGACGG
GTGGCTGACCGCGGGGGAGGCGTGGTGCCGGTTCGACCGGATCTGCGACGATCCGCTCATGGGGCGGGGAGGCCCCGATC
TGGCGCTCATCGGCGAGGGCCTGCTCGCATGCGTGGAACTGACCGCGTCCACCGGACAGTCATTGGAAGCGAAGTTCCGC
CGGTGGGACAGGATCCTCGACCATCCGGCCTGCCGGAACACGCATGTCCTGTGGCTGTCGGCCGGCCGCGGCGACGGGAA
CACGGGGATCCTGGAACGGTTGGACGGCTTGTGCGCGGCACGCTCCCGCCAGCATGCGGGCGATGCGGCGTCCGTCATGG
CCGGCGGTTTCATGACGGACGGGTGGACGCCCTCACCCGGCATCCCCGTCCCCCTGGGCGGGTGGATGGGACATGA

Upstream 100 bases:

>100_bases
GCGTTTCGCCACCACCCCGCATCCCGGTCGGCGCAAGGCGACACGCCGTACGCGGACGACCCGCATAGCCGGACCTCATG
TTCGACGCTTTCGACGAATC

Downstream 100 bases:

>100_bases
CATGGACAGGCTCGGCCGCGTGTTCGGCCTGCCGAACGCCGCCTCATGGCGGCTGCCGGAGCGCATGCGCGGGCATTGGC
ATGGCTGAGCGACAGGCGGG

Product: LigA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MVVGRIGPQLVGQPRGRPARMAPRPGEGARMAGTACPRHRGGARAHPLAQDLRDKPTPRARPETARRPAVHAVDDARRHA
PHRPGVPHQRERARRMGTEKRGLHGRPPARPPRDRPGAAPAGPHARRNRGHRAGAVARATPVRPAQPDLHGARRPRPARR
VADRGGGVVPVRPDLRRSAHGAGRPRSGAHRRGPARMRGTDRVHRTVIGSEVPPVGQDPRPSGLPEHACPVAVGRPRRRE
HGDPGTVGRLVRGTLPPACGRCGVRHGRRFHDGRVDALTRHPRPPGRVDGT

Sequences:

>Translated_291_residues
MVVGRIGPQLVGQPRGRPARMAPRPGEGARMAGTACPRHRGGARAHPLAQDLRDKPTPRARPETARRPAVHAVDDARRHA
PHRPGVPHQRERARRMGTEKRGLHGRPPARPPRDRPGAAPAGPHARRNRGHRAGAVARATPVRPAQPDLHGARRPRPARR
VADRGGGVVPVRPDLRRSAHGAGRPRSGAHRRGPARMRGTDRVHRTVIGSEVPPVGQDPRPSGLPEHACPVAVGRPRRRE
HGDPGTVGRLVRGTLPPACGRCGVRHGRRFHDGRVDALTRHPRPPGRVDGT
>Mature_291_residues
MVVGRIGPQLVGQPRGRPARMAPRPGEGARMAGTACPRHRGGARAHPLAQDLRDKPTPRARPETARRPAVHAVDDARRHA
PHRPGVPHQRERARRMGTEKRGLHGRPPARPPRDRPGAAPAGPHARRNRGHRAGAVARATPVRPAQPDLHGARRPRPARR
VADRGGGVVPVRPDLRRSAHGAGRPRSGAHRRGPARMRGTDRVHRTVIGSEVPPVGQDPRPSGLPEHACPVAVGRPRRRE
HGDPGTVGRLVRGTLPPACGRCGVRHGRRFHDGRVDALTRHPRPPGRVDGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31468; Mature: 31468

Theoretical pI: Translated: 12.67; Mature: 12.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGRIGPQLVGQPRGRPARMAPRPGEGARMAGTACPRHRGGARAHPLAQDLRDKPTPRA
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
RPETARRPAVHAVDDARRHAPHRPGVPHQRERARRMGTEKRGLHGRPPARPPRDRPGAAP
CCCHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCC
AGPHARRNRGHRAGAVARATPVRPAQPDLHGARRPRPARRVADRGGGVVPVRPDLRRSAH
CCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHHHHHHC
GAGRPRSGAHRRGPARMRGTDRVHRTVIGSEVPPVGQDPRPSGLPEHACPVAVGRPRRRE
CCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
HGDPGTVGRLVRGTLPPACGRCGVRHGRRFHDGRVDALTRHPRPPGRVDGT
CCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVVGRIGPQLVGQPRGRPARMAPRPGEGARMAGTACPRHRGGARAHPLAQDLRDKPTPRA
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
RPETARRPAVHAVDDARRHAPHRPGVPHQRERARRMGTEKRGLHGRPPARPPRDRPGAAP
CCCHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCC
AGPHARRNRGHRAGAVARATPVRPAQPDLHGARRPRPARRVADRGGGVVPVRPDLRRSAH
CCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHHHHHHC
GAGRPRSGAHRRGPARMRGTDRVHRTVIGSEVPPVGQDPRPSGLPEHACPVAVGRPRRRE
CCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
HGDPGTVGRLVRGTLPPACGRCGVRHGRRFHDGRVDALTRHPRPPGRVDGT
CCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA