| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692001
Identifier: 213692001
GI number: 213692001
Start: 1307999
End: 1309432
Strand: Reverse
Name: 213692001
Synonym: Blon_1119
Alternate gene names: NA
Gene position: 1309432-1307999 (Counterclockwise)
Preceding gene: 213692002
Following gene: 213692000
Centisome position: 46.22
GC content: 64.37
Gene sequence:
>1434_bases ATGGCTTTTCTTTCCGGCCGGCTTTACGGGACCGCCCAGAGCATGGACTTGATCCTTGAGACCAGCCAATCCCGTTACGA TACGCTGAACCGTTATTATGACGGCGCTCAGCATCTCAAGCAGCTCGGGCTGGCGATTCCCCCGGAACTGAAAAGGTTCA CGGTGATAGTGAACTGGCCGCGCGTCGTGGCGGACAGCCGCGTCGACCGTCTCGACATGAAAGGCTTTCGCGTAGGCGAC GATGAGAGGCTGGCCGAGGCCGCATGGCAGTTGTGGCAGCGGTTCGGCATGGTCGAGGACCAGAGCTCCTATCTTGATTT CGAACTGTTCGGCCGCAGCTTCAAGGTCGTGTCCAAGGACGACGACGGGGGCGTGGAGATTCGCAGCGTCAGCCCGGAGG ACATCATCACCCTGCGCAGCCCGGTGACCGGCGACGTGTATATCGCCTACCAGCGCATCCGCGACGAATACGACATGACC GTGCGCCGCATCGTATGGACGCGCAAACGCACCATTTACATGGACGCGGCGTGGCGAGTGGAGAATGAAGTCGCGAACGA CATCGGCATCGTGCCGGTCGTTCCCGCTTTCCGAAACTGGCGCACCCGCGAACCGGCCTACATGCCGTGGCCACGCCTGC AGGGCGTCTCCTGCATCAGCGACGTCATCGACCTGACCGACTCGTGCGCACGTGACCTGACCAACGCCCAATTGGCGCAG GAGACACACGCGGTGCCCCAGCGCGGCGTGCTCGGTGCCACCAAGGGCGATTTCGTGGACGAGAACGGCACCCGGCTGCC CGCCTGGGAGGCGTATTTCGGCCGCGTGTGGGCGTTGCATAACGCGAACGCGAAAACATTCGAATTCTCCAGCGCCCAGA TGACGAACTTCACAGCGATGGTGGACATGTACGCGCGCCTGTGTGCCGGTTCGTCCGGCCTGCCGCCGAACTACTTCGGC CTGGCCGCCGACGACGCGGCCAGCGCCGACGCGATACGTTCCCGCGAGGCGAAGCTCGTCAAAAGCATCGAACGCGACCA GCGCGCGCTCGGCGCGCAGGCCAAGGAGACCGCTCGCATCGCCATCGCGATGATGATGGGAGTGGAGACCGCAAAACGGT TCGACCAGTGCGAGGCTCTGTGGCATGACCCCGGCACCCCGACCGTCGCCCAGCGTGCCGACGCGGTGATGAAGCTCTAC TCGGTGCAGGACCCCGCCGGCCGTCCGCTGCTGCCGCGCGAGATGGCGTGGGAGGAATTGGGTTGGAGCCCCGACAAGAT CAAACGCGCCACGAGCCTGCTCCGCCGGGAGGAAGAGGAGTCGTTGGCCGCGTATCTGAAACCGGAGGTGCCCGATGCCG GAAACGATGGCGGGTCAGGTGATGCCACGTCAGGCGGTGACGCAGGCGCGGCATCTGCGAAGCCGCAGCAATAG
Upstream 100 bases:
>100_bases TCCTCGCGCACGAGGCGGCGTCCGACATGAGGGCGCTCAACTGGGGTAACGATTCGAACAGGATCGTCGTGTTCCGATGG TGAAAAAGGAGGGATGACTG
Downstream 100 bases:
>100_bases GACCATTCGCGAGGTCGTCTCCCTGTGGCGACGCCATGCGAGACCCGATTTCGATGATGCGTTCTACCGCATGGGGCCGG CCCTGTTCCGGCTGCTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MAFLSGRLYGTAQSMDLILETSQSRYDTLNRYYDGAQHLKQLGLAIPPELKRFTVIVNWPRVVADSRVDRLDMKGFRVGD DERLAEAAWQLWQRFGMVEDQSSYLDFELFGRSFKVVSKDDDGGVEIRSVSPEDIITLRSPVTGDVYIAYQRIRDEYDMT VRRIVWTRKRTIYMDAAWRVENEVANDIGIVPVVPAFRNWRTREPAYMPWPRLQGVSCISDVIDLTDSCARDLTNAQLAQ ETHAVPQRGVLGATKGDFVDENGTRLPAWEAYFGRVWALHNANAKTFEFSSAQMTNFTAMVDMYARLCAGSSGLPPNYFG LAADDAASADAIRSREAKLVKSIERDQRALGAQAKETARIAIAMMMGVETAKRFDQCEALWHDPGTPTVAQRADAVMKLY SVQDPAGRPLLPREMAWEELGWSPDKIKRATSLLRREEEESLAAYLKPEVPDAGNDGGSGDATSGGDAGAASAKPQQ
Sequences:
>Translated_477_residues MAFLSGRLYGTAQSMDLILETSQSRYDTLNRYYDGAQHLKQLGLAIPPELKRFTVIVNWPRVVADSRVDRLDMKGFRVGD DERLAEAAWQLWQRFGMVEDQSSYLDFELFGRSFKVVSKDDDGGVEIRSVSPEDIITLRSPVTGDVYIAYQRIRDEYDMT VRRIVWTRKRTIYMDAAWRVENEVANDIGIVPVVPAFRNWRTREPAYMPWPRLQGVSCISDVIDLTDSCARDLTNAQLAQ ETHAVPQRGVLGATKGDFVDENGTRLPAWEAYFGRVWALHNANAKTFEFSSAQMTNFTAMVDMYARLCAGSSGLPPNYFG LAADDAASADAIRSREAKLVKSIERDQRALGAQAKETARIAIAMMMGVETAKRFDQCEALWHDPGTPTVAQRADAVMKLY SVQDPAGRPLLPREMAWEELGWSPDKIKRATSLLRREEEESLAAYLKPEVPDAGNDGGSGDATSGGDAGAASAKPQQ >Mature_476_residues AFLSGRLYGTAQSMDLILETSQSRYDTLNRYYDGAQHLKQLGLAIPPELKRFTVIVNWPRVVADSRVDRLDMKGFRVGDD ERLAEAAWQLWQRFGMVEDQSSYLDFELFGRSFKVVSKDDDGGVEIRSVSPEDIITLRSPVTGDVYIAYQRIRDEYDMTV RRIVWTRKRTIYMDAAWRVENEVANDIGIVPVVPAFRNWRTREPAYMPWPRLQGVSCISDVIDLTDSCARDLTNAQLAQE THAVPQRGVLGATKGDFVDENGTRLPAWEAYFGRVWALHNANAKTFEFSSAQMTNFTAMVDMYARLCAGSSGLPPNYFGL AADDAASADAIRSREAKLVKSIERDQRALGAQAKETARIAIAMMMGVETAKRFDQCEALWHDPGTPTVAQRADAVMKLYS VQDPAGRPLLPREMAWEELGWSPDKIKRATSLLRREEEESLAAYLKPEVPDAGNDGGSGDATSGGDAGAASAKPQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53199; Mature: 53068
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLSGRLYGTAQSMDLILETSQSRYDTLNRYYDGAQHLKQLGLAIPPELKRFTVIVNWP CCEECCCEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECH RVVADSRVDRLDMKGFRVGDDERLAEAAWQLWQRFGMVEDQSSYLDFELFGRSFKVVSKD HHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEEECC DDGGVEIRSVSPEDIITLRSPVTGDVYIAYQRIRDEYDMTVRRIVWTRKRTIYMDAAWRV CCCCEEEEECCCCCEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHH ENEVANDIGIVPVVPAFRNWRTREPAYMPWPRLQGVSCISDVIDLTDSCARDLTNAQLAQ HHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ETHAVPQRGVLGATKGDFVDENGTRLPAWEAYFGRVWALHNANAKTFEFSSAQMTNFTAM HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECCCCCEEEECCCHHHHHHHH VDMYARLCAGSSGLPPNYFGLAADDAASADAIRSREAKLVKSIERDQRALGAQAKETARI HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AIAMMMGVETAKRFDQCEALWHDPGTPTVAQRADAVMKLYSVQDPAGRPLLPREMAWEEL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH GWSPDKIKRATSLLRREEEESLAAYLKPEVPDAGNDGGSGDATSGGDAGAASAKPQQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AFLSGRLYGTAQSMDLILETSQSRYDTLNRYYDGAQHLKQLGLAIPPELKRFTVIVNWP CEECCCEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECH RVVADSRVDRLDMKGFRVGDDERLAEAAWQLWQRFGMVEDQSSYLDFELFGRSFKVVSKD HHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEEECC DDGGVEIRSVSPEDIITLRSPVTGDVYIAYQRIRDEYDMTVRRIVWTRKRTIYMDAAWRV CCCCEEEEECCCCCEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHH ENEVANDIGIVPVVPAFRNWRTREPAYMPWPRLQGVSCISDVIDLTDSCARDLTNAQLAQ HHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ETHAVPQRGVLGATKGDFVDENGTRLPAWEAYFGRVWALHNANAKTFEFSSAQMTNFTAM HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECCCCCEEEECCCHHHHHHHH VDMYARLCAGSSGLPPNYFGLAADDAASADAIRSREAKLVKSIERDQRALGAQAKETARI HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AIAMMMGVETAKRFDQCEALWHDPGTPTVAQRADAVMKLYSVQDPAGRPLLPREMAWEEL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH GWSPDKIKRATSLLRREEEESLAAYLKPEVPDAGNDGGSGDATSGGDAGAASAKPQQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA