| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691951
Identifier: 213691951
GI number: 213691951
Start: 1249766
End: 1250719
Strand: Reverse
Name: 213691951
Synonym: Blon_1067
Alternate gene names: NA
Gene position: 1250719-1249766 (Counterclockwise)
Preceding gene: 213691952
Following gene: 213691950
Centisome position: 44.15
GC content: 59.01
Gene sequence:
>954_bases ATGTCGTTCTTCATGGACCCCAGCGTGACCGTTGGCACCAAGATCCTCGAGCTCTTCTATATTTTCATGGGTTTCATGTC CGTGTATGCGGGCGTACGCAACCTACTCGATAAAACCAACAAGGCCCGCTACGGCACTTTCGTGTTCTGGACGGCGCTCG GTATCGTCATCGCGTTCGGCCGTTGGATTCCGGCCATTGCGGACGGTGTGCTCATTATCATCATGGTCATTCCCGCCATC TTCCGCCAAGTGCGTAAGGGATCGGCGTCCGATTCGAGCGCTCCCAGCACCGCCGAAGTGGCCGCGAACTTCCAGCGCAT CGGCATGCGCATCTTCATTCCCGCCCTGTGCCTGGGCGTGTTCGCCATTATCGGCGCCCTGATTCCCAGCGTCAGCGCCC TGACCGGCTGCTGCATCGGTGTGATGATTGCCGCCGTGATTCTGTTCGCGTTCTCGCATGACAACAAGCCGGTCGTATTC CTCAACGATTCGGAACGCCTGTTGTCTGCCATGGGTGCGCTCTGCATGCTGCCGATGCTGCTGGCCAGTCTCGGCGCGAT TTTCACAGCCGCAGGTGTCGGCGACGTGATCGCCACGCTGGTCGGCGGCATTATTCCGAAGGGCAACGTCACGCTGGGCA TCATCGTATTCGGTGTGGGCATGATGCTGTTCACGATGATCATGGGCAATGCCTTCGCCGCAATTACCGTAATGACCGTG GGCATTGGCGCGCCATTCGTGCTCGCCTACGGTGCGGACCCGGCGGTGATTGGCATTCTGGCGCTGACCTGTGGCTACTG CGGCACGCTGTGCACGCCGATGGCCGCCAACTTCAACATCGTGCCCGTCGCGATGCTCGATATGAAGGACCGCATGGGCG TGGTTAAGAAGCAGGTGCTGCCTGCATTGGTGATGATTGTGGTGCAGATCGTCTATATGCTGATCGCGCAATAA
Upstream 100 bases:
>100_bases TATTACATCATCAAGGACACACGACTGCGTAAGAAGTACTACGGTGCCGAAGCCGCCGCTCAGGCCACTACCGCTACCAC CACCGGCAAGGAGGCCTGAT
Downstream 100 bases:
>100_bases CCTCGTTGTCCAGATACCACAACAATCCGTGAAATAAGGAGCTAATGATGAGCAAGATTCTGGTGACCGGATTCGATCCG TTCGGCGGCGAGCCGGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSFFMDPSVTVGTKILELFYIFMGFMSVYAGVRNLLDKTNKARYGTFVFWTALGIVIAFGRWIPAIADGVLIIIMVIPAI FRQVRKGSASDSSAPSTAEVAANFQRIGMRIFIPALCLGVFAIIGALIPSVSALTGCCIGVMIAAVILFAFSHDNKPVVF LNDSERLLSAMGALCMLPMLLASLGAIFTAAGVGDVIATLVGGIIPKGNVTLGIIVFGVGMMLFTMIMGNAFAAITVMTV GIGAPFVLAYGADPAVIGILALTCGYCGTLCTPMAANFNIVPVAMLDMKDRMGVVKKQVLPALVMIVVQIVYMLIAQ
Sequences:
>Translated_317_residues MSFFMDPSVTVGTKILELFYIFMGFMSVYAGVRNLLDKTNKARYGTFVFWTALGIVIAFGRWIPAIADGVLIIIMVIPAI FRQVRKGSASDSSAPSTAEVAANFQRIGMRIFIPALCLGVFAIIGALIPSVSALTGCCIGVMIAAVILFAFSHDNKPVVF LNDSERLLSAMGALCMLPMLLASLGAIFTAAGVGDVIATLVGGIIPKGNVTLGIIVFGVGMMLFTMIMGNAFAAITVMTV GIGAPFVLAYGADPAVIGILALTCGYCGTLCTPMAANFNIVPVAMLDMKDRMGVVKKQVLPALVMIVVQIVYMLIAQ >Mature_316_residues SFFMDPSVTVGTKILELFYIFMGFMSVYAGVRNLLDKTNKARYGTFVFWTALGIVIAFGRWIPAIADGVLIIIMVIPAIF RQVRKGSASDSSAPSTAEVAANFQRIGMRIFIPALCLGVFAIIGALIPSVSALTGCCIGVMIAAVILFAFSHDNKPVVFL NDSERLLSAMGALCMLPMLLASLGAIFTAAGVGDVIATLVGGIIPKGNVTLGIIVFGVGMMLFTMIMGNAFAAITVMTVG IGAPFVLAYGADPAVIGILALTCGYCGTLCTPMAANFNIVPVAMLDMKDRMGVVKKQVLPALVMIVVQIVYMLIAQ
Specific function: Unknown
COG id: COG3817
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33402; Mature: 33271
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFMDPSVTVGTKILELFYIFMGFMSVYAGVRNLLDKTNKARYGTFVFWTALGIVIAFG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RWIPAIADGVLIIIMVIPAIFRQVRKGSASDSSAPSTAEVAANFQRIGMRIFIPALCLGV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FAIIGALIPSVSALTGCCIGVMIAAVILFAFSHDNKPVVFLNDSERLLSAMGALCMLPML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHH LASLGAIFTAAGVGDVIATLVGGIIPKGNVTLGIIVFGVGMMLFTMIMGNAFAAITVMTV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGAPFVLAYGADPAVIGILALTCGYCGTLCTPMAANFNIVPVAMLDMKDRMGVVKKQVL HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCHHHHHHHHHHHH PALVMIVVQIVYMLIAQ HHHHHHHHHHHHHHHCC >Mature Secondary Structure SFFMDPSVTVGTKILELFYIFMGFMSVYAGVRNLLDKTNKARYGTFVFWTALGIVIAFG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RWIPAIADGVLIIIMVIPAIFRQVRKGSASDSSAPSTAEVAANFQRIGMRIFIPALCLGV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FAIIGALIPSVSALTGCCIGVMIAAVILFAFSHDNKPVVFLNDSERLLSAMGALCMLPML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHH LASLGAIFTAAGVGDVIATLVGGIIPKGNVTLGIIVFGVGMMLFTMIMGNAFAAITVMTV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGAPFVLAYGADPAVIGILALTCGYCGTLCTPMAANFNIVPVAMLDMKDRMGVVKKQVL HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCHHHHHHHHHHHH PALVMIVVQIVYMLIAQ HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA