| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691952
Identifier: 213691952
GI number: 213691952
Start: 1250721
End: 1251449
Strand: Reverse
Name: 213691952
Synonym: Blon_1068
Alternate gene names: NA
Gene position: 1251449-1250721 (Counterclockwise)
Preceding gene: 213691957
Following gene: 213691951
Centisome position: 44.18
GC content: 58.02
Gene sequence:
>729_bases ATGGAACCAAATTATCTCGTGTTATTGGGAATCGTGATTGTGATTGTGGGTTTCGCCCTCAGACTTGATGCGATTCTGAT CATTATCGTGGCGGCTTTGGTGACTGCGCTGGTCGGCGGCATTGGCGTCGACGGCTTCCTGACCACGTTGGGTACGTCGT TCGTCTCGAACCGCAGCATGGCAATTTTCATCATCGTGTTGCTGGTCACCGGCACATTGGAGCGCAACGGTCTGAAAACC GCAGCCGCGCAGCTGATCGGCAGGGTGAAGAATGCGACGCCCGGTATGGTGATCGCCCTGTATGGTGTGATGCGTCTCGT GTTCGCCGCGTTCAACGTGAGTTTTGGTGGCGTGGCCGGGTTCGTGCGTCCGGTCATTATGCCGATGGCGGTGGGCGCGA TTGAAGCGTCCGGTCACGAGCCGAACGACGAGTATGTGGAAGAGCTCAAGGGCATGGCTTCCGGTATGGAGAACGTCGCA TGGTTCTTTGGCCAGGTGCTGTTCGTAGGTACGGCCGGTGCGCTGCTCGTGCAGTCCACATTGAAGCCGCTGGGTTATGA CGTCGAACTATTGCGCATGGCCATTATCGAGATCCCGGTCGCGGTGATTGCCGTGGCGGTCACCGCCGTCTATTACATCA TCAAGGACACACGACTGCGTAAGAAGTACTACGGTGCCGAAGCCGCCGCTCAGGCCACTACCGCTACCACCACCGGCAAG GAGGCCTGA
Upstream 100 bases:
>100_bases GCGCGAAGAGGCCGCCGAAGCATGATTCGCGTCGTACACTATCTGGTATTCGAATACGCTTGCGGCGCAATGCGCACGTA CTGTGGAAGGGATTTGCCGC
Downstream 100 bases:
>100_bases TATGTCGTTCTTCATGGACCCCAGCGTGACCGTTGGCACCAAGATCCTCGAGCTCTTCTATATTTTCATGGGTTTCATGT CCGTGTATGCGGGCGTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MEPNYLVLLGIVIVIVGFALRLDAILIIIVAALVTALVGGIGVDGFLTTLGTSFVSNRSMAIFIIVLLVTGTLERNGLKT AAAQLIGRVKNATPGMVIALYGVMRLVFAAFNVSFGGVAGFVRPVIMPMAVGAIEASGHEPNDEYVEELKGMASGMENVA WFFGQVLFVGTAGALLVQSTLKPLGYDVELLRMAIIEIPVAVIAVAVTAVYYIIKDTRLRKKYYGAEAAAQATTATTTGK EA
Sequences:
>Translated_242_residues MEPNYLVLLGIVIVIVGFALRLDAILIIIVAALVTALVGGIGVDGFLTTLGTSFVSNRSMAIFIIVLLVTGTLERNGLKT AAAQLIGRVKNATPGMVIALYGVMRLVFAAFNVSFGGVAGFVRPVIMPMAVGAIEASGHEPNDEYVEELKGMASGMENVA WFFGQVLFVGTAGALLVQSTLKPLGYDVELLRMAIIEIPVAVIAVAVTAVYYIIKDTRLRKKYYGAEAAAQATTATTTGK EA >Mature_242_residues MEPNYLVLLGIVIVIVGFALRLDAILIIIVAALVTALVGGIGVDGFLTTLGTSFVSNRSMAIFIIVLLVTGTLERNGLKT AAAQLIGRVKNATPGMVIALYGVMRLVFAAFNVSFGGVAGFVRPVIMPMAVGAIEASGHEPNDEYVEELKGMASGMENVA WFFGQVLFVGTAGALLVQSTLKPLGYDVELLRMAIIEIPVAVIAVAVTAVYYIIKDTRLRKKYYGAEAAAQATTATTTGK EA
Specific function: Unknown
COG id: COG3819
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25486; Mature: 25486
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPNYLVLLGIVIVIVGFALRLDAILIIIVAALVTALVGGIGVDGFLTTLGTSFVSNRSM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCH AIFIIVLLVTGTLERNGLKTAAAQLIGRVKNATPGMVIALYGVMRLVFAAFNVSFGGVAG HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH FVRPVIMPMAVGAIEASGHEPNDEYVEELKGMASGMENVAWFFGQVLFVGTAGALLVQST HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKPLGYDVELLRMAIIEIPVAVIAVAVTAVYYIIKDTRLRKKYYGAEAAAQATTATTTGK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC EA CC >Mature Secondary Structure MEPNYLVLLGIVIVIVGFALRLDAILIIIVAALVTALVGGIGVDGFLTTLGTSFVSNRSM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCH AIFIIVLLVTGTLERNGLKTAAAQLIGRVKNATPGMVIALYGVMRLVFAAFNVSFGGVAG HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH FVRPVIMPMAVGAIEASGHEPNDEYVEELKGMASGMENVAWFFGQVLFVGTAGALLVQST HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKPLGYDVELLRMAIIEIPVAVIAVAVTAVYYIIKDTRLRKKYYGAEAAAQATTATTTGK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC EA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA