Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691903

Identifier: 213691903

GI number: 213691903

Start: 1202726

End: 1203697

Strand: Direct

Name: 213691903

Synonym: Blon_1015

Alternate gene names: NA

Gene position: 1202726-1203697 (Clockwise)

Preceding gene: 213691902

Following gene: 213691904

Centisome position: 42.46

GC content: 59.57

Gene sequence:

>972_bases
ATGGCGAAAACAGCAGCGAATGCACCGGTAACCGTGGTGCCCGGAGGCGACTCGTATTTGAACGACGCGCGCACCAAGGC
ACTGTGCGCGCAGGCGTTGAAGGCGCGGCCCGACGCCGACCTCATCGAACTCGACGCCACATCGGCCGACCAGTATGCCT
TCGATGAAGCCGTCAGCCCATCGTTGCTTTCCGACGTTGCCGTGGTCAAACTCGTCAACCTGCAGAATGCCGACGACAAG
CTCGCCGAAGCTCTGGTGGCGTACACCAAGCAGGCCGCCAAGGATCCGAACGGCTCCAGCGTGGTGATCTGCCAGCACGA
GGGCGGCGTCAAAGGGCGCAAAATCATCGACCAACTGGTGAAAGCCGGCGCTCGCAAAGAGGACGTGCCGGATTTGAAGA
AACCGGATGCACAGCTCAATTTCGTGCTCGGAGAATTCGAGAAACGTGGTCGTAGAGCCGAACCGATGGCCGCACAGCAG
CTGGTATCCGTACTCGGCGGCAAAACCGGCGAACTCGCCGCCATGTGCGAGCAACTGTGTTTCGACTTTGACGATAATCC
GATGGGCCTCGACCGTGTCAACCAGTATTTGACCGCCAATCCGCAGGTCACCGGTTTTGCCGTGGCAGACAAGGCCGTGG
AAGGCAAAACCGCAGAAGCCATCGTCATGATGCGTGCAGCTGTGGAACAAGGGACCGATCCCATCGCGCTGATCGGCGCG
TTGGCCATGAAGCTCCGTACCATTGCCAAAGCCTCGGCGGTACGGGCCGGCACGATTTCCCAGGCCGAAGCGAAAACCAA
TCCGTGGGTGCTGAAGAATGCGATGCGCCAACTTGGCGGCTGGACTTCGGCAGGACTCGCGCATTGCATCCGTATGCTCG
CCTGGGCGGATGAGCAAAGCAAAACAAACGGTGGCGACCCGGTATATGCGCTGGAACGCTGCATTGAAGACATCAGTCAT
AAAGGTCGGTAA

Upstream 100 bases:

>100_bases
GCAACCATCGCAATCCCAGCCGAATACCACTATCTTGACGGCAGCGGCAAAATCGTGATGCCGGCAGGTCATTGTCCAAC
CTGTGTGGCGAGATGGGGGC

Downstream 100 bases:

>100_bases
AAGTCGATAAAGGAGTATTTATGAGCGAACACACTATTGCGGCTCCCACCAGCGAGGCCATGCAGGAGCTCGGCCGTCGT
GTGGCCGGAATGGTACACGG

Product: DNA polymerase III, delta subunit

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunit Delta; DNA Polymerase III Delta; DNA Polymerase III; DNA-Directed DNA Polymerase III Subunit Delta; DNA Polymerase III Delta Subunit HolA; DNA Polymerase III Subunit Delta-Like Protein; LOW QUALITY PROTEIN DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MAKTAANAPVTVVPGGDSYLNDARTKALCAQALKARPDADLIELDATSADQYAFDEAVSPSLLSDVAVVKLVNLQNADDK
LAEALVAYTKQAAKDPNGSSVVICQHEGGVKGRKIIDQLVKAGARKEDVPDLKKPDAQLNFVLGEFEKRGRRAEPMAAQQ
LVSVLGGKTGELAAMCEQLCFDFDDNPMGLDRVNQYLTANPQVTGFAVADKAVEGKTAEAIVMMRAAVEQGTDPIALIGA
LAMKLRTIAKASAVRAGTISQAEAKTNPWVLKNAMRQLGGWTSAGLAHCIRMLAWADEQSKTNGGDPVYALERCIEDISH
KGR

Sequences:

>Translated_323_residues
MAKTAANAPVTVVPGGDSYLNDARTKALCAQALKARPDADLIELDATSADQYAFDEAVSPSLLSDVAVVKLVNLQNADDK
LAEALVAYTKQAAKDPNGSSVVICQHEGGVKGRKIIDQLVKAGARKEDVPDLKKPDAQLNFVLGEFEKRGRRAEPMAAQQ
LVSVLGGKTGELAAMCEQLCFDFDDNPMGLDRVNQYLTANPQVTGFAVADKAVEGKTAEAIVMMRAAVEQGTDPIALIGA
LAMKLRTIAKASAVRAGTISQAEAKTNPWVLKNAMRQLGGWTSAGLAHCIRMLAWADEQSKTNGGDPVYALERCIEDISH
KGR
>Mature_322_residues
AKTAANAPVTVVPGGDSYLNDARTKALCAQALKARPDADLIELDATSADQYAFDEAVSPSLLSDVAVVKLVNLQNADDKL
AEALVAYTKQAAKDPNGSSVVICQHEGGVKGRKIIDQLVKAGARKEDVPDLKKPDAQLNFVLGEFEKRGRRAEPMAAQQL
VSVLGGKTGELAAMCEQLCFDFDDNPMGLDRVNQYLTANPQVTGFAVADKAVEGKTAEAIVMMRAAVEQGTDPIALIGAL
AMKLRTIAKASAVRAGTISQAEAKTNPWVLKNAMRQLGGWTSAGLAHCIRMLAWADEQSKTNGGDPVYALERCIEDISHK
GR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 34348; Mature: 34216

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTAANAPVTVVPGGDSYLNDARTKALCAQALKARPDADLIELDATSADQYAFDEAVSP
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCH
SLLSDVAVVKLVNLQNADDKLAEALVAYTKQAAKDPNGSSVVICQHEGGVKGRKIIDQLV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHH
KAGARKEDVPDLKKPDAQLNFVLGEFEKRGRRAEPMAAQQLVSVLGGKTGELAAMCEQLC
HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
FDFDDNPMGLDRVNQYLTANPQVTGFAVADKAVEGKTAEAIVMMRAAVEQGTDPIALIGA
CCCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
LAMKLRTIAKASAVRAGTISQAEAKTNPWVLKNAMRQLGGWTSAGLAHCIRMLAWADEQS
HHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHC
KTNGGDPVYALERCIEDISHKGR
CCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKTAANAPVTVVPGGDSYLNDARTKALCAQALKARPDADLIELDATSADQYAFDEAVSP
CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCH
SLLSDVAVVKLVNLQNADDKLAEALVAYTKQAAKDPNGSSVVICQHEGGVKGRKIIDQLV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHH
KAGARKEDVPDLKKPDAQLNFVLGEFEKRGRRAEPMAAQQLVSVLGGKTGELAAMCEQLC
HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
FDFDDNPMGLDRVNQYLTANPQVTGFAVADKAVEGKTAEAIVMMRAAVEQGTDPIALIGA
CCCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
LAMKLRTIAKASAVRAGTISQAEAKTNPWVLKNAMRQLGGWTSAGLAHCIRMLAWADEQS
HHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHC
KTNGGDPVYALERCIEDISHKGR
CCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA