| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691902
Identifier: 213691902
GI number: 213691902
Start: 1200851
End: 1202605
Strand: Direct
Name: 213691902
Synonym: Blon_1014
Alternate gene names: NA
Gene position: 1200851-1202605 (Clockwise)
Preceding gene: 213691901
Following gene: 213691903
Centisome position: 42.39
GC content: 60.8
Gene sequence:
>1755_bases ATGAGCAGGGATCGGATACTGCGCGAGCAGGGGAGCCGCGATTGGAGGATGCTGCCGATCGCCATAGTGATGTGGGCGGC GAGTCTGGGAGCGCACGCATTATTCGCATGGAGGATGTCTGATGGACTCGGCACCGGTCAGGCAAAGGCCGATGCCGGAG CTGGCATTGACGCCACCATAATCGGCATGGAATGGCCTGTCACACGAATATTACCTATAACAGTGGCGTCATGTGCTGCC GTGGCGGCGACGATCGTGGTGTCTTTCCGCCTGCGGATCAGGTGGACGGGAACATTGACCGTATGCGTCGCGGTGGCGTG CATCGGCAGTATGACGGCAATCGCGTCGGACACCATTGCCTGGCATGATCCTGCCTCCGCACAAGCTCGCCAATCCAGTT CATACCACGAAGTCATGGCCACGGTGACGACGCCCGTGATCGCTTCGGACCAACGCACATACGATTGTCAGACGGACATA CGGCTGAGCGGCATCACTGTGGATGGCGCGGACGTACGTTCCACGGTCGCCGTGCGCGTATACGCCGATGAATCGTATTG TGGGCAGTTGCGTCGAGGCGCGGTCTATCTGTTGACGGGCGTATTGCAGCAAGCGCGATATGGACGCATACCGCTATGGC TGCTCTTGGAAGGAAAACAGCCGGTAGCGCAGGTGCGGGCTCCGCCGTGGCATCTCGCCGCGATTGCGCAGGTGCAGGAG GCGTTTTTCACCGTGACCGGACAATTGTCCGATCAGGGGCGTGTGTTGGTGCCGGGACTGACGATGGGTGTGCTTGGCCA GGATTATATCGGCGGCGATGCCGGTCCGATGCCGGTCAACAGCACGTATGCGCAAACGTTGGAAAATCAGTTCCGCCGGT CCGGCATCATGCACCTCATGGCCGTATCCGGCGGCCACTTCGTACTGGTGGCAGGACTGGTGCGTCGGTTATGCATGTGG ATGCTGCTTGATCGGCGGCTGACGGCGTTGCTGGTCTCTGGAGTATATGCGCTGCTGGCATTGGCGATGTTCCCCAGTGA TTCGGTCACCCGCGCGTTCATCATGGGATTGATAGGTGCGTTGGCGTATGCGATGGGACGGCGTACGCAAGCGTTGAGCG CCCTGTGCTGGACGATAATCGGTGTATTGGCGGTGAACCCGGATATGTCGGCCAGCTACGGATTCGCCTTGTCTTCGGCC GCCGTACTGGGTATCGTGCTGTTTGCGGGGCGGCTGGCCGGTGTCTTTGAGCGAGCGATGCCGCACAGCATCGCCGAAAT GATGGCGATGACCGTGGCCGCGCAATTGTTCACCCTGCCGATTCAGGTGTTGATGGAACCGGAATTGCCGTTGCTGTCCG TGCCGGCGAACCTGCTGGTGTCACCGTTCGTGGGATTGGCCACGATGGTGGGATTGATGGCACTGGCCTGCGCATGGTGC ACGCCATGGCTGGCCGGCGTATTCGCGTGGATATCGTCATGGGGCACGCTGGTGATGGAACGGGTGGCGTTGTGGCTGGG CGGCAGCACGATGGCCGTCATCCCATGGAAAGACGGCGTTACGGGTGCCGTGCTGATTGTGACGGCGGAAATCGGTATCG GCATGCTACTGGTGTTCGTCAGCCGTTGCCTCCAGCATGTCCGTCGTTATGAGGCCGGAATGTCTGGCGTGCGCTTCGGT TCCGCTTGGCGCGTCCGCCTCAGTCTCTGGTGTGAGGAGACGAGACGCCTCTTTACGTGGCGGCAAGCCGAATAG
Upstream 100 bases:
>100_bases GCACGGCGATTGGCGGGTATGCATCAGTCGATCAGCTGCTGGATGTCAAAGGCATCGGCTCCAAGACGTTGGAGACCATG CGAGGGCAGGTGACGGTCGG
Downstream 100 bases:
>100_bases CCAATGCGGTATTCGGTGCAGCAACCATCGCAATCCCAGCCGAATACCACTATCTTGACGGCAGCGGCAAAATCGTGATG CCGGCAGGTCATTGTCCAAC
Product: ComEC/Rec2-related protein
Products: NA
Alternate protein names: DNA Internalization-Related Competence; Competence Protein; ComEC/Rec2-Like Protein; Integral Membrane Protein; Competence Membrane Protein; DNA Uptake Protein; Comec/Rec2-Related Protein; DNA Uptake Membrane Protein; ComA-Like Transmembrane Protein; Hydrolase-Like Protein; ComE Operon; DNA Internalization Competence; ComEC/Rec2-Related Domain-Containing Protein; COME Operon; ComEC Operon Protein; Conserved ComA-Like Protein; Competence ; Transmembrane Protein Related ComA; ComEC/Rec2-Related Protein Protein; Competence Protein ComEC
Number of amino acids: Translated: 584; Mature: 583
Protein sequence:
>584_residues MSRDRILREQGSRDWRMLPIAIVMWAASLGAHALFAWRMSDGLGTGQAKADAGAGIDATIIGMEWPVTRILPITVASCAA VAATIVVSFRLRIRWTGTLTVCVAVACIGSMTAIASDTIAWHDPASAQARQSSSYHEVMATVTTPVIASDQRTYDCQTDI RLSGITVDGADVRSTVAVRVYADESYCGQLRRGAVYLLTGVLQQARYGRIPLWLLLEGKQPVAQVRAPPWHLAAIAQVQE AFFTVTGQLSDQGRVLVPGLTMGVLGQDYIGGDAGPMPVNSTYAQTLENQFRRSGIMHLMAVSGGHFVLVAGLVRRLCMW MLLDRRLTALLVSGVYALLALAMFPSDSVTRAFIMGLIGALAYAMGRRTQALSALCWTIIGVLAVNPDMSASYGFALSSA AVLGIVLFAGRLAGVFERAMPHSIAEMMAMTVAAQLFTLPIQVLMEPELPLLSVPANLLVSPFVGLATMVGLMALACAWC TPWLAGVFAWISSWGTLVMERVALWLGGSTMAVIPWKDGVTGAVLIVTAEIGIGMLLVFVSRCLQHVRRYEAGMSGVRFG SAWRVRLSLWCEETRRLFTWRQAE
Sequences:
>Translated_584_residues MSRDRILREQGSRDWRMLPIAIVMWAASLGAHALFAWRMSDGLGTGQAKADAGAGIDATIIGMEWPVTRILPITVASCAA VAATIVVSFRLRIRWTGTLTVCVAVACIGSMTAIASDTIAWHDPASAQARQSSSYHEVMATVTTPVIASDQRTYDCQTDI RLSGITVDGADVRSTVAVRVYADESYCGQLRRGAVYLLTGVLQQARYGRIPLWLLLEGKQPVAQVRAPPWHLAAIAQVQE AFFTVTGQLSDQGRVLVPGLTMGVLGQDYIGGDAGPMPVNSTYAQTLENQFRRSGIMHLMAVSGGHFVLVAGLVRRLCMW MLLDRRLTALLVSGVYALLALAMFPSDSVTRAFIMGLIGALAYAMGRRTQALSALCWTIIGVLAVNPDMSASYGFALSSA AVLGIVLFAGRLAGVFERAMPHSIAEMMAMTVAAQLFTLPIQVLMEPELPLLSVPANLLVSPFVGLATMVGLMALACAWC TPWLAGVFAWISSWGTLVMERVALWLGGSTMAVIPWKDGVTGAVLIVTAEIGIGMLLVFVSRCLQHVRRYEAGMSGVRFG SAWRVRLSLWCEETRRLFTWRQAE >Mature_583_residues SRDRILREQGSRDWRMLPIAIVMWAASLGAHALFAWRMSDGLGTGQAKADAGAGIDATIIGMEWPVTRILPITVASCAAV AATIVVSFRLRIRWTGTLTVCVAVACIGSMTAIASDTIAWHDPASAQARQSSSYHEVMATVTTPVIASDQRTYDCQTDIR LSGITVDGADVRSTVAVRVYADESYCGQLRRGAVYLLTGVLQQARYGRIPLWLLLEGKQPVAQVRAPPWHLAAIAQVQEA FFTVTGQLSDQGRVLVPGLTMGVLGQDYIGGDAGPMPVNSTYAQTLENQFRRSGIMHLMAVSGGHFVLVAGLVRRLCMWM LLDRRLTALLVSGVYALLALAMFPSDSVTRAFIMGLIGALAYAMGRRTQALSALCWTIIGVLAVNPDMSASYGFALSSAA VLGIVLFAGRLAGVFERAMPHSIAEMMAMTVAAQLFTLPIQVLMEPELPLLSVPANLLVSPFVGLATMVGLMALACAWCT PWLAGVFAWISSWGTLVMERVALWLGGSTMAVIPWKDGVTGAVLIVTAEIGIGMLLVFVSRCLQHVRRYEAGMSGVRFGS AWRVRLSLWCEETRRLFTWRQAE
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63076; Mature: 62945
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDRILREQGSRDWRMLPIAIVMWAASLGAHALFAWRMSDGLGTGQAKADAGAGIDATI CCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCCCCCCCCEEE IGMEWPVTRILPITVASCAAVAATIVVSFRLRIRWTGTLTVCVAVACIGSMTAIASDTIA EECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEE WHDPASAQARQSSSYHEVMATVTTPVIASDQRTYDCQTDIRLSGITVDGADVRSTVAVRV ECCCCCHHHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEE YADESYCGQLRRGAVYLLTGVLQQARYGRIPLWLLLEGKQPVAQVRAPPWHLAAIAQVQE EECCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHH AFFTVTGQLSDQGRVLVPGLTMGVLGQDYIGGDAGPMPVNSTYAQTLENQFRRSGIMHLM HHHHEEECCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE AVSGGHFVLVAGLVRRLCMWMLLDRRLTALLVSGVYALLALAMFPSDSVTRAFIMGLIGA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LAYAMGRRTQALSALCWTIIGVLAVNPDMSASYGFALSSAAVLGIVLFAGRLAGVFERAM HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH PHSIAEMMAMTVAAQLFTLPIQVLMEPELPLLSVPANLLVSPFVGLATMVGLMALACAWC HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH TPWLAGVFAWISSWGTLVMERVALWLGGSTMAVIPWKDGVTGAVLIVTAEIGIGMLLVFV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHH SRCLQHVRRYEAGMSGVRFGSAWRVRLSLWCEETRRLFTWRQAE HHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SRDRILREQGSRDWRMLPIAIVMWAASLGAHALFAWRMSDGLGTGQAKADAGAGIDATI CCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCCCCCCCCEEE IGMEWPVTRILPITVASCAAVAATIVVSFRLRIRWTGTLTVCVAVACIGSMTAIASDTIA EECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEE WHDPASAQARQSSSYHEVMATVTTPVIASDQRTYDCQTDIRLSGITVDGADVRSTVAVRV ECCCCCHHHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEE YADESYCGQLRRGAVYLLTGVLQQARYGRIPLWLLLEGKQPVAQVRAPPWHLAAIAQVQE EECCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHH AFFTVTGQLSDQGRVLVPGLTMGVLGQDYIGGDAGPMPVNSTYAQTLENQFRRSGIMHLM HHHHEEECCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE AVSGGHFVLVAGLVRRLCMWMLLDRRLTALLVSGVYALLALAMFPSDSVTRAFIMGLIGA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LAYAMGRRTQALSALCWTIIGVLAVNPDMSASYGFALSSAAVLGIVLFAGRLAGVFERAM HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH PHSIAEMMAMTVAAQLFTLPIQVLMEPELPLLSVPANLLVSPFVGLATMVGLMALACAWC HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH TPWLAGVFAWISSWGTLVMERVALWLGGSTMAVIPWKDGVTGAVLIVTAEIGIGMLLVFV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHH SRCLQHVRRYEAGMSGVRFGSAWRVRLSLWCEETRRLFTWRQAE HHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA