| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is dut [H]
Identifier: 213691861
GI number: 213691861
Start: 1152176
End: 1152652
Strand: Direct
Name: dut [H]
Synonym: Blon_0970
Alternate gene names: 213691861
Gene position: 1152176-1152652 (Clockwise)
Preceding gene: 213691860
Following gene: 213691862
Centisome position: 40.67
GC content: 65.83
Gene sequence:
>477_bases ATGGCGTTCGACGAGACCTACAACGAGCCCGAATCCACCGAGGTCCTGGTCAAAAGCCTCGACCCCGAACACCCGGCCCT GCTCCGGTACGCGCATGCGGGCGATGCCGGCGCCGATCTCATCACCACCGTCGACGTGACCCTCAAGCCCTTCGAGCGGG CATTGGTGCCCACCGGCGTGGCCATCGCCCTGCCTGCGGGTTACGTGGCGTTGGTGCACCCGCGTTCCGGGCTGGCGGCC AAGCAGGGCGTCACCGTGCTCAACGCGCCTGGCACCGTTGATGCAGGCTACCGTGGCGAAATCAAGGTGCCGCTGATCAA CCTCGATCCGAAGCACACCGCCGTCTTCCATCCGGGCGATCGCATCGCTCAATTGGTGATTCAGCGGTATGTTGAGGCTC GGTTCATCCCGGCCGAGACACTGCCCGGATCCGATCGCGCCGAACGCGGGTTCGGTTCGACGGGAGTGGCGTCCTGA
Upstream 100 bases:
>100_bases ACGAGTTCGTCTGCTCGCAGTGCTTCCTGGTCAAGCATCGTAGCCAGCTCGCCTACACGGACGAGGATGGCCAGCCGGTG TGTGAGGAGTGCGCCGCCTG
Downstream 100 bases:
>100_bases CCGGATTAGGCCGGTTGAATGACCAAGGTGATGACGGCAACAACGGTTGCGGAACCAATGATGGCGGACGGGTGCGTGCG CATGGCACTGGTTCGCGGTT
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MAFDETYNEPESTEVLVKSLDPEHPALLRYAHAGDAGADLITTVDVTLKPFERALVPTGVAIALPAGYVALVHPRSGLAA KQGVTVLNAPGTVDAGYRGEIKVPLINLDPKHTAVFHPGDRIAQLVIQRYVEARFIPAETLPGSDRAERGFGSTGVAS
Sequences:
>Translated_158_residues MAFDETYNEPESTEVLVKSLDPEHPALLRYAHAGDAGADLITTVDVTLKPFERALVPTGVAIALPAGYVALVHPRSGLAA KQGVTVLNAPGTVDAGYRGEIKVPLINLDPKHTAVFHPGDRIAQLVIQRYVEARFIPAETLPGSDRAERGFGSTGVAS >Mature_157_residues AFDETYNEPESTEVLVKSLDPEHPALLRYAHAGDAGADLITTVDVTLKPFERALVPTGVAIALPAGYVALVHPRSGLAAK QGVTVLNAPGTVDAGYRGEIKVPLINLDPKHTAVFHPGDRIAQLVIQRYVEARFIPAETLPGSDRAERGFGSTGVAS
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=133, Percent_Identity=40.6015037593985, Blast_Score=88, Evalue=3e-18, Organism=Homo sapiens, GI4503423, Length=133, Percent_Identity=40.6015037593985, Blast_Score=87, Evalue=4e-18, Organism=Homo sapiens, GI70906441, Length=133, Percent_Identity=40.6015037593985, Blast_Score=85, Evalue=3e-17, Organism=Escherichia coli, GI1790071, Length=149, Percent_Identity=37.5838926174497, Blast_Score=84, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71988561, Length=126, Percent_Identity=44.4444444444444, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6319729, Length=121, Percent_Identity=37.1900826446281, Blast_Score=80, Evalue=1e-16, Organism=Drosophila melanogaster, GI19921126, Length=121, Percent_Identity=39.6694214876033, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24583610, Length=121, Percent_Identity=39.6694214876033, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16751; Mature: 16620
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDETYNEPESTEVLVKSLDPEHPALLRYAHAGDAGADLITTVDVTLKPFERALVPTGV CCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEECCHHHHHCCCCE AIALPAGYVALVHPRSGLAAKQGVTVLNAPGTVDAGYRGEIKVPLINLDPKHTAVFHPGD EEEECCCEEEEEECCCCCCHHCCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEECCHH RIAQLVIQRYVEARFIPAETLPGSDRAERGFGSTGVAS HHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCC >Mature Secondary Structure AFDETYNEPESTEVLVKSLDPEHPALLRYAHAGDAGADLITTVDVTLKPFERALVPTGV CCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEECCHHHHHCCCCE AIALPAGYVALVHPRSGLAAKQGVTVLNAPGTVDAGYRGEIKVPLINLDPKHTAVFHPGD EEEECCCEEEEEECCCCCCHHCCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEECCHH RIAQLVIQRYVEARFIPAETLPGSDRAERGFGSTGVAS HHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA