Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is gsiC [H]

Identifier: 213691815

GI number: 213691815

Start: 1089575

End: 1090501

Strand: Direct

Name: gsiC [H]

Synonym: Blon_0923

Alternate gene names: 213691815

Gene position: 1089575-1090501 (Clockwise)

Preceding gene: 213691814

Following gene: 213691816

Centisome position: 38.46

GC content: 58.58

Gene sequence:

>927_bases
ATGGGTAAGTATCTTCTGCGACGCATTCTGCAGATGATCCCCGTGGTTCTCGGTACGACACTTCTGGTCTATGCCCTTGT
CTTCGCCCTGCCGGGCGACCCCGTCAAGGCCATGTTCGGAGACAAGCCCGTCAATGAGGCCGTCGCAGCCCAGATCCGCG
CAGAATACCATCTCGACCAGCCGTTCATCGTTCAGTACTTCATCTACCTGAAGAATGCACTGACCCTGAACTTCGGCGAT
ACCTTCGCCGGACAGCCTGTTCTCGACGAAATCGCCCGCGCCTTCCCGGTCACCATCCGGCTCGGCCTGATGGCGTTCGT
GTTCGAGGCGATCTTCGGCGTGGTCTTCGGCATCATCTCGGGCCTCAAGAAGGGCAAGTGGTACGACACCGTCATCCTGA
TCGTCTCCCTGCTGCTTATTTCCGTGCCGACCTTCGTCACCGGCTTCGTCATGCAGTATGTCTTTGGTATTCAGTGGACG
ATATTGCCGGTGACGGCAGGCGCAGACCCGGGCTTCATCGACCTGCTCATGCCGGCCATGGTGCTCGGATCGGTGTCGAT
GGCCTACATCATTCGATTGACTCGCTCCGAAATCTCCTCCAACATCGCCGAGGATTACGTGCGCACCGCACGTGCCAAAG
GTATGTCGAACGGTCAGGTCATGCTGCGCCACGTACTGCGCAACTCCCTGATTCCGGTCGTCACCTACCTTGGTCAGGAC
ATCGGCGCCCTGATGGGTGGTGCCATGATCACCGAGCAGATCTTCAACATCCACGGCATCGGCTTCCTCACCTACCAGTC
CATTCTGAAGGGCGAGGCTAACCTGGTGGTGTCCATCGTCACGTTGCTCATGCTGATCTTCGTGGTGTGCAACCTCGTCG
TCGACCTGCTGTACGCGGCCCTCGATCCGCGTATCCGTTACGCGTGA

Upstream 100 bases:

>100_bases
TATCACAGTCCGGGCATGCGGTAAACTGTCGGAGTATTTATCGACCGGCGGGGGCGTACTATACCCTTTCTGGCCGGTCT
AGGAAATAAGGAGCAACCGT

Downstream 100 bases:

>100_bases
GCCGGGAGGAGTGAGCGATAATGGCAAACGAAACCACTGAGAACGAACTCAACGAGACCGGCGAACCGGGAACCGAATAC
TTCATGGAAACCCTGCCTGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MGKYLLRRILQMIPVVLGTTLLVYALVFALPGDPVKAMFGDKPVNEAVAAQIRAEYHLDQPFIVQYFIYLKNALTLNFGD
TFAGQPVLDEIARAFPVTIRLGLMAFVFEAIFGVVFGIISGLKKGKWYDTVILIVSLLLISVPTFVTGFVMQYVFGIQWT
ILPVTAGADPGFIDLLMPAMVLGSVSMAYIIRLTRSEISSNIAEDYVRTARAKGMSNGQVMLRHVLRNSLIPVVTYLGQD
IGALMGGAMITEQIFNIHGIGFLTYQSILKGEANLVVSIVTLLMLIFVVCNLVVDLLYAALDPRIRYA

Sequences:

>Translated_308_residues
MGKYLLRRILQMIPVVLGTTLLVYALVFALPGDPVKAMFGDKPVNEAVAAQIRAEYHLDQPFIVQYFIYLKNALTLNFGD
TFAGQPVLDEIARAFPVTIRLGLMAFVFEAIFGVVFGIISGLKKGKWYDTVILIVSLLLISVPTFVTGFVMQYVFGIQWT
ILPVTAGADPGFIDLLMPAMVLGSVSMAYIIRLTRSEISSNIAEDYVRTARAKGMSNGQVMLRHVLRNSLIPVVTYLGQD
IGALMGGAMITEQIFNIHGIGFLTYQSILKGEANLVVSIVTLLMLIFVVCNLVVDLLYAALDPRIRYA
>Mature_307_residues
GKYLLRRILQMIPVVLGTTLLVYALVFALPGDPVKAMFGDKPVNEAVAAQIRAEYHLDQPFIVQYFIYLKNALTLNFGDT
FAGQPVLDEIARAFPVTIRLGLMAFVFEAIFGVVFGIISGLKKGKWYDTVILIVSLLLISVPTFVTGFVMQYVFGIQWTI
LPVTAGADPGFIDLLMPAMVLGSVSMAYIIRLTRSEISSNIAEDYVRTARAKGMSNGQVMLRHVLRNSLIPVVTYLGQDI
GALMGGAMITEQIFNIHGIGFLTYQSILKGEANLVVSIVTLLMLIFVVCNLVVDLLYAALDPRIRYA

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=308, Percent_Identity=37.3376623376623, Blast_Score=205, Evalue=2e-54,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=33.2344213649852, Blast_Score=200, Evalue=8e-53,
Organism=Escherichia coli, GI1787497, Length=310, Percent_Identity=33.2258064516129, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1789888, Length=309, Percent_Identity=33.9805825242718, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1787761, Length=329, Percent_Identity=31.306990881459, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=26.1194029850746, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788504, Length=363, Percent_Identity=24.7933884297521, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33907; Mature: 33776

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKYLLRRILQMIPVVLGTTLLVYALVFALPGDPVKAMFGDKPVNEAVAAQIRAEYHLDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCC
PFIVQYFIYLKNALTLNFGDTFAGQPVLDEIARAFPVTIRLGLMAFVFEAIFGVVFGIIS
HHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLKKGKWYDTVILIVSLLLISVPTFVTGFVMQYVFGIQWTILPVTAGADPGFIDLLMPAM
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
VLGSVSMAYIIRLTRSEISSNIAEDYVRTARAKGMSNGQVMLRHVLRNSLIPVVTYLGQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IGALMGGAMITEQIFNIHGIGFLTYQSILKGEANLVVSIVTLLMLIFVVCNLVVDLLYAA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPRIRYA
HCCCCCCC
>Mature Secondary Structure 
GKYLLRRILQMIPVVLGTTLLVYALVFALPGDPVKAMFGDKPVNEAVAAQIRAEYHLDQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCC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HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]