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The map label for this gene is oppC [H]

Identifier: 213691816

GI number: 213691816

Start: 1090522

End: 1091526

Strand: Direct

Name: oppC [H]

Synonym: Blon_0924

Alternate gene names: 213691816

Gene position: 1090522-1091526 (Clockwise)

Preceding gene: 213691815

Following gene: 213691817

Centisome position: 38.5

GC content: 63.18

Gene sequence:

>1005_bases
ATGGCAAACGAAACCACTGAGAACGAACTCAACGAGACCGGCGAACCGGGAACCGAATACTTCATGGAAACCCTGCCTGG
TCAAGACCGCTACGTGGCTCCAATCGAGGAGACCCCGTTGCAGGACATCGATTCCGTCGACGAATCTGCTCCGGCCACCA
GCATGTGGGCCGACGCATGGCGCACCCTGCGCCGCAACCCGCTGTTCATCATCTCCGGGCTGCTGATTCTCTTCATCATC
GTGGTGGCCATCGCCCCCGGGCTGTTCACCAAGCAGGACCCGAACGCTTGCGATCTGGGCAACTCCCTGAGCCCCTCCAC
CGCCGGCCACCCCTTCGGCTTCGACCTGCAAGGCTGCGACGTGTACACCCGCGTGATCTACGGCACGCGCACCTCGCTGT
CCGTCGGCGTGCTCTCCACGCTGCTGGTCGTGATCGTCGGTACCCTGATCGGCGCCGTCGCCGGCTTCTTCGGCGGCTGG
ATTGATGCAGTGCTGAGCCGTATCACCGACATCTTCTTCGCGCTGCCTATGCTGCTTGGCGCCATCGTGGTGCTTCAGAT
GTTCAAGACCTCCAAGTCCATCTGGAAGATCGTGCTGGTGCTGACGCTCTTCGGCTGGGTCGGCGTATGCCGTATCGCCC
GAAGCGCCGTGCTGGAATCGAAGAACCTCGAATTCAACACCGCTTCCACGGCCCTCGGCTCCACGCCTGCCAGAAACCTG
TTCCGTCACATCTTGCCGAACTCCCTGGCCCCGATCATCGTCATCGCCACCACCTCGCTGGCCTCCTACATCGTGGCCGA
AGCCACGCTGAGCTTCCTCGGCGTCGGCCTGCCCACCACCACGGTGAGCTGGGGCGGCGACATCTCCAGCGCGCAGACCA
ACCTGCAGACCGATCCGATGGTGCTGTTCTACCCGTCCGCCGCACTGGCCATCACCGTGCTTGCGTTCATCATGATGGGC
GACGCCGTCAAGGACGCCCTCGACCCGAAGAGCCGAACGGCCTGA

Upstream 100 bases:

>100_bases
TCATGCTGATCTTCGTGGTGTGCAACCTCGTCGTCGACCTGCTGTACGCGGCCCTCGATCCGCGTATCCGTTACGCGTGA
GCCGGGAGGAGTGAGCGATA

Downstream 100 bases:

>100_bases
GCAAGGGGAGTGGAGAAAGACAATGACTGACAATACCAACGCCACGATGCTGGCCATGCAGAAAGAACATGGCCCGCTGC
TGGAAGTCCGGAACCTGGCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MANETTENELNETGEPGTEYFMETLPGQDRYVAPIEETPLQDIDSVDESAPATSMWADAWRTLRRNPLFIISGLLILFII
VVAIAPGLFTKQDPNACDLGNSLSPSTAGHPFGFDLQGCDVYTRVIYGTRTSLSVGVLSTLLVVIVGTLIGAVAGFFGGW
IDAVLSRITDIFFALPMLLGAIVVLQMFKTSKSIWKIVLVLTLFGWVGVCRIARSAVLESKNLEFNTASTALGSTPARNL
FRHILPNSLAPIIVIATTSLASYIVAEATLSFLGVGLPTTTVSWGGDISSAQTNLQTDPMVLFYPSAALAITVLAFIMMG
DAVKDALDPKSRTA

Sequences:

>Translated_334_residues
MANETTENELNETGEPGTEYFMETLPGQDRYVAPIEETPLQDIDSVDESAPATSMWADAWRTLRRNPLFIISGLLILFII
VVAIAPGLFTKQDPNACDLGNSLSPSTAGHPFGFDLQGCDVYTRVIYGTRTSLSVGVLSTLLVVIVGTLIGAVAGFFGGW
IDAVLSRITDIFFALPMLLGAIVVLQMFKTSKSIWKIVLVLTLFGWVGVCRIARSAVLESKNLEFNTASTALGSTPARNL
FRHILPNSLAPIIVIATTSLASYIVAEATLSFLGVGLPTTTVSWGGDISSAQTNLQTDPMVLFYPSAALAITVLAFIMMG
DAVKDALDPKSRTA
>Mature_333_residues
ANETTENELNETGEPGTEYFMETLPGQDRYVAPIEETPLQDIDSVDESAPATSMWADAWRTLRRNPLFIISGLLILFIIV
VAIAPGLFTKQDPNACDLGNSLSPSTAGHPFGFDLQGCDVYTRVIYGTRTSLSVGVLSTLLVVIVGTLIGAVAGFFGGWI
DAVLSRITDIFFALPMLLGAIVVLQMFKTSKSIWKIVLVLTLFGWVGVCRIARSAVLESKNLEFNTASTALGSTPARNLF
RHILPNSLAPIIVIATTSLASYIVAEATLSFLGVGLPTTTVSWGGDISSAQTNLQTDPMVLFYPSAALAITVLAFIMMGD
AVKDALDPKSRTA

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=304, Percent_Identity=32.5657894736842, Blast_Score=170, Evalue=2e-43,
Organism=Escherichia coli, GI1787760, Length=272, Percent_Identity=30.5147058823529, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1789964, Length=311, Percent_Identity=36.0128617363344, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1787498, Length=282, Percent_Identity=34.3971631205674, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789889, Length=238, Percent_Identity=32.3529411764706, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1788505, Length=229, Percent_Identity=31.4410480349345, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787549, Length=216, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35757; Mature: 35626

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANETTENELNETGEPGTEYFMETLPGQDRYVAPIEETPLQDIDSVDESAPATSMWADAW
CCCCCCHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHH
RTLRRNPLFIISGLLILFIIVVAIAPGLFTKQDPNACDLGNSLSPSTAGHPFGFDLQGCD
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHH
VYTRVIYGTRTSLSVGVLSTLLVVIVGTLIGAVAGFFGGWIDAVLSRITDIFFALPMLLG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVVLQMFKTSKSIWKIVLVLTLFGWVGVCRIARSAVLESKNLEFNTASTALGSTPARNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHH
FRHILPNSLAPIIVIATTSLASYIVAEATLSFLGVGLPTTTVSWGGDISSAQTNLQTDPM
HHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHCCCCCCCE
VLFYPSAALAITVLAFIMMGDAVKDALDPKSRTA
EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ANETTENELNETGEPGTEYFMETLPGQDRYVAPIEETPLQDIDSVDESAPATSMWADAW
CCCCCHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHH
RTLRRNPLFIISGLLILFIIVVAIAPGLFTKQDPNACDLGNSLSPSTAGHPFGFDLQGCD
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHH
VYTRVIYGTRTSLSVGVLSTLLVVIVGTLIGAVAGFFGGWIDAVLSRITDIFFALPMLLG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVVLQMFKTSKSIWKIVLVLTLFGWVGVCRIARSAVLESKNLEFNTASTALGSTPARNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHH
FRHILPNSLAPIIVIATTSLASYIVAEATLSFLGVGLPTTTVSWGGDISSAQTNLQTDPM
HHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHCCCCCCCE
VLFYPSAALAITVLAFIMMGDAVKDALDPKSRTA
EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]