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The map label for this gene is dppE [H]

Identifier: 213691814

GI number: 213691814

Start: 1087634

End: 1089274

Strand: Direct

Name: dppE [H]

Synonym: Blon_0922

Alternate gene names: 213691814

Gene position: 1087634-1089274 (Clockwise)

Preceding gene: 213691813

Following gene: 213691815

Centisome position: 38.4

GC content: 60.45

Gene sequence:

>1641_bases
ATGAAGAAGAAAGCTCTTGCTTTCGCTGCCATGGCTTGCTCCGTGGCCATGCTGCTGAGCGCCTGCGGCGGCTCCAACAG
CAACGCTGCCTCCGGTAACACCGCTGGCTCCAACATCATCACTGCGTACAACTCCGAAGCGCAGAACCCGCTGATCCCGG
GCAACACCAACGAAACCGGCGGCAGCAAGCCGGTCGGTCTGCTGTTCTCCCAACTGGTCTCCTTCGACAAGGATGGCAAG
GCTTCCAACGAAGTGGCTGAGTCCATCACCCCGAACGCTGACGCCACCCAGTACACCATCAAGCTGAAGTCCGGCTGGAA
GTTCACCGACGGCACTCCGGTAACCGCTGAGTCCTTCACCAAGGCCTGGTCCTACGTGGCCAACGCCAAGAACGCCCAGA
AGTGCTCCTCCTTCTTCTCCGCCATCGCCGGCTATGACGATCTGCAGAAGGATGGCCTCAAGGGTGACGAGCAGCTCTCC
GGCCTCAAGGTCGTGGACGACACCACCTTCACCGTTGACCTGAACCAGTCCGACTCCGTGTTCCCGATTAAGGTCGGCTA
CCCGGCCTTTGCCCCGCTGCCGGAATCCTTCTACAAGGACCCGAAGGCCTTCGGCGAGGCTCCTGTGGGCAACGGCCCGT
ACAAGTTCTCCAAGTGGGACCACAACAAGGAAATCGCCCTCGTCAAGAACCCTGACTACAAGGGCAACGAGGACGTCAAG
AACGACGGCGTGACCTTCAAGGTCTACACCGACGACTCCGCCGCCTACCGCGACATTCAGGCCGGCAACCTCGACGTGAT
GGAATCCGTCCCGGCCGCCTTCACCAAGACCTTCAAGACCGACAAGAAGGTCCAGGCTTACTCCGAGGCCGGCTCCGTCA
TCCAGACCTTCACCATCCCGTCCTCCCTTGACCACTTCAAGAACGACGAGGAAGGCCAGCTGCGTCGTCAGGCCATCTCC
ATGGCCATCAACCGTGACCAGCTCATCGACAAGGTGCTCAACGGCAACGCCACCGCCGCCACCGAGTTCACCTCCCCGAA
GACCCCGGGCTACTCCGACTCCCTCAAGGGTGCCGACAACCTGAAGTTCAACGCCTCCAAGGCCAAGGAACTGTGGGCCA
AGGCTGACGCCATCTCCAAGTACGACGGCCAGCTCACCTTCTCCTACAACGCCGATGGTGGTGCCAAGCCGATTTACGAC
GCCGTCGTGAACCAGCTCAAGAACAACTTGGGCATCGACGCGGCCACCAACCCGATCCCGACCTTCCAGGAATTCCGTGA
CGCGATCACCAACCGTCAGATGAAGGGCGCCTTCCGTACCGGCTGGCAGCCTGACTACCCGTCCGCCGAGAACTACCTGT
GGCAGCTGTACTCCACCGCTGCTGCTGATGGTAACGGCTCCAACGATGGTGACTACAAGAACCCGGCCTTCGATGACCTG
TGCAAGCAGGCTGCTGCCGCTTCCAGCACTGATGACGCCAACAAGCTGTACCAGCAGGCTGAGGAAATCCTTCTCAACGA
CCTTCCGGCCATCCCGCTGTACTACTCCAACGCCTCCGGTGTGGCTTCCCTCAACGTGAAGTCCGGCTACGCCTTCGATT
GGCAGAACCTCCCGACCTACACCGAGATGTCCAAGAAGTGA

Upstream 100 bases:

>100_bases
GACATCGTGAGATGCAAGTCTCACGGTGACGGGGAATCCAGCCCCGTTCGCATGAGGCGGGGCTGAGACGTCCTGCAACC
TAATGAATAGGAGAAATCAT

Downstream 100 bases:

>100_bases
GTCTGACTCACTGAACGGATACCGTTAGGTAGTTCGGAAATAAAGGGCGAGGATCGCAAGATCCCCGCCCTTTTTGTTGT
GTGAGGGGTGCTTGCTCACG

Product: extracellular solute-binding protein, family 5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MKKKALAFAAMACSVAMLLSACGGSNSNAASGNTAGSNIITAYNSEAQNPLIPGNTNETGGSKPVGLLFSQLVSFDKDGK
ASNEVAESITPNADATQYTIKLKSGWKFTDGTPVTAESFTKAWSYVANAKNAQKCSSFFSAIAGYDDLQKDGLKGDEQLS
GLKVVDDTTFTVDLNQSDSVFPIKVGYPAFAPLPESFYKDPKAFGEAPVGNGPYKFSKWDHNKEIALVKNPDYKGNEDVK
NDGVTFKVYTDDSAAYRDIQAGNLDVMESVPAAFTKTFKTDKKVQAYSEAGSVIQTFTIPSSLDHFKNDEEGQLRRQAIS
MAINRDQLIDKVLNGNATAATEFTSPKTPGYSDSLKGADNLKFNASKAKELWAKADAISKYDGQLTFSYNADGGAKPIYD
AVVNQLKNNLGIDAATNPIPTFQEFRDAITNRQMKGAFRTGWQPDYPSAENYLWQLYSTAAADGNGSNDGDYKNPAFDDL
CKQAAAASSTDDANKLYQQAEEILLNDLPAIPLYYSNASGVASLNVKSGYAFDWQNLPTYTEMSKK

Sequences:

>Translated_546_residues
MKKKALAFAAMACSVAMLLSACGGSNSNAASGNTAGSNIITAYNSEAQNPLIPGNTNETGGSKPVGLLFSQLVSFDKDGK
ASNEVAESITPNADATQYTIKLKSGWKFTDGTPVTAESFTKAWSYVANAKNAQKCSSFFSAIAGYDDLQKDGLKGDEQLS
GLKVVDDTTFTVDLNQSDSVFPIKVGYPAFAPLPESFYKDPKAFGEAPVGNGPYKFSKWDHNKEIALVKNPDYKGNEDVK
NDGVTFKVYTDDSAAYRDIQAGNLDVMESVPAAFTKTFKTDKKVQAYSEAGSVIQTFTIPSSLDHFKNDEEGQLRRQAIS
MAINRDQLIDKVLNGNATAATEFTSPKTPGYSDSLKGADNLKFNASKAKELWAKADAISKYDGQLTFSYNADGGAKPIYD
AVVNQLKNNLGIDAATNPIPTFQEFRDAITNRQMKGAFRTGWQPDYPSAENYLWQLYSTAAADGNGSNDGDYKNPAFDDL
CKQAAAASSTDDANKLYQQAEEILLNDLPAIPLYYSNASGVASLNVKSGYAFDWQNLPTYTEMSKK
>Mature_546_residues
MKKKALAFAAMACSVAMLLSACGGSNSNAASGNTAGSNIITAYNSEAQNPLIPGNTNETGGSKPVGLLFSQLVSFDKDGK
ASNEVAESITPNADATQYTIKLKSGWKFTDGTPVTAESFTKAWSYVANAKNAQKCSSFFSAIAGYDDLQKDGLKGDEQLS
GLKVVDDTTFTVDLNQSDSVFPIKVGYPAFAPLPESFYKDPKAFGEAPVGNGPYKFSKWDHNKEIALVKNPDYKGNEDVK
NDGVTFKVYTDDSAAYRDIQAGNLDVMESVPAAFTKTFKTDKKVQAYSEAGSVIQTFTIPSSLDHFKNDEEGQLRRQAIS
MAINRDQLIDKVLNGNATAATEFTSPKTPGYSDSLKGADNLKFNASKAKELWAKADAISKYDGQLTFSYNADGGAKPIYD
AVVNQLKNNLGIDAATNPIPTFQEFRDAITNRQMKGAFRTGWQPDYPSAENYLWQLYSTAAADGNGSNDGDYKNPAFDDL
CKQAAAASSTDDANKLYQQAEEILLNDLPAIPLYYSNASGVASLNVKSGYAFDWQNLPTYTEMSKK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=464, Percent_Identity=28.2327586206897, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1787495, Length=468, Percent_Identity=26.2820512820513, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI1789397, Length=530, Percent_Identity=25.0943396226415, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1787052, Length=526, Percent_Identity=24.3346007604563, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1787762, Length=487, Percent_Identity=25.4620123203285, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1789966, Length=493, Percent_Identity=24.9492900608519, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58971; Mature: 58971

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKALAFAAMACSVAMLLSACGGSNSNAASGNTAGSNIITAYNSEAQNPLIPGNTNETG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GSKPVGLLFSQLVSFDKDGKASNEVAESITPNADATQYTIKLKSGWKFTDGTPVTAESFT
CCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCEECCCCCCCHHHHH
KAWSYVANAKNAQKCSSFFSAIAGYDDLQKDGLKGDEQLSGLKVVDDTTFTVDLNQSDSV
HHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHCCEEEECCCEEEEEECCCCCE
FPIKVGYPAFAPLPESFYKDPKAFGEAPVGNGPYKFSKWDHNKEIALVKNPDYKGNEDVK
EEEEECCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
NDGVTFKVYTDDSAAYRDIQAGNLDVMESVPAAFTKTFKTDKKVQAYSEAGSVIQTFTIP
CCCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECC
SSLDHFKNDEEGQLRRQAISMAINRDQLIDKVLNGNATAATEFTSPKTPGYSDSLKGADN
HHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCC
LKFNASKAKELWAKADAISKYDGQLTFSYNADGGAKPIYDAVVNQLKNNLGIDAATNPIP
CEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
TFQEFRDAITNRQMKGAFRTGWQPDYPSAENYLWQLYSTAAADGNGSNDGDYKNPAFDDL
CHHHHHHHHHCCHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
CKQAAAASSTDDANKLYQQAEEILLNDLPAIPLYYSNASGVASLNVKSGYAFDWQNLPTY
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCEECCCCCCCH
TEMSKK
HHHCCC
>Mature Secondary Structure
MKKKALAFAAMACSVAMLLSACGGSNSNAASGNTAGSNIITAYNSEAQNPLIPGNTNETG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GSKPVGLLFSQLVSFDKDGKASNEVAESITPNADATQYTIKLKSGWKFTDGTPVTAESFT
CCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCEECCCCCCCHHHHH
KAWSYVANAKNAQKCSSFFSAIAGYDDLQKDGLKGDEQLSGLKVVDDTTFTVDLNQSDSV
HHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHCCEEEECCCEEEEEECCCCCE
FPIKVGYPAFAPLPESFYKDPKAFGEAPVGNGPYKFSKWDHNKEIALVKNPDYKGNEDVK
EEEEECCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
NDGVTFKVYTDDSAAYRDIQAGNLDVMESVPAAFTKTFKTDKKVQAYSEAGSVIQTFTIP
CCCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECC
SSLDHFKNDEEGQLRRQAISMAINRDQLIDKVLNGNATAATEFTSPKTPGYSDSLKGADN
HHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCC
LKFNASKAKELWAKADAISKYDGQLTFSYNADGGAKPIYDAVVNQLKNNLGIDAATNPIP
CEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
TFQEFRDAITNRQMKGAFRTGWQPDYPSAENYLWQLYSTAAADGNGSNDGDYKNPAFDDL
CHHHHHHHHHCCHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
CKQAAAASSTDDANKLYQQAEEILLNDLPAIPLYYSNASGVASLNVKSGYAFDWQNLPTY
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCEECCCCCCCH
TEMSKK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]