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The map label for this gene is xerC [H]

Identifier: 213691813

GI number: 213691813

Start: 1086313

End: 1087380

Strand: Direct

Name: xerC [H]

Synonym: Blon_0921

Alternate gene names: 213691813

Gene position: 1086313-1087380 (Clockwise)

Preceding gene: 213691812

Following gene: 213691814

Centisome position: 38.35

GC content: 62.83

Gene sequence:

>1068_bases
GTGTCATCTACGCAGTTCGACGGCGATATCGACTCCTTCGTCTCCTATCTGAAGTCCAACCGCGGCCTGTCAGCGAATAC
GCTCAAAGCGTATCGCGCGGATCTCACGGCATGCCTGCACCTGTTCGAGCTGCGCGGCGTGACCGATCTGAACGAGATCA
CGCTGGATGATCTGCGCAGCTGGATGGCGGTGGAATCGCGCGATCACGCCCGCAGCAGCATGGCCCGCAAAACCGTGGCC
GTGCGCGGGTTCTTCGCGTGGGCCTATGAGCATGGGCTGACCGCCACCGACCCGGCCGCCACACTGATGACTCCCTCGAT
TCCCAGCACGCTGCCCGCGGTGCTCACCGAATCCCAGGCCGAGCAATTATTGGATGTCGCTGAACATGCCGTTGCAACAA
ACCAGTACAAGGACGATGGGGGAGCGGCAGCCGCGTCCGGCAGCGGCAAGGCAGCTGGCAAGACAGCTGATAAGTCGGCC
GATACCGTAAACCGCAGTGAGGCACCCGCCCGTGCAGACAAGCGCGACAACGCCCGAGTCACCGCCGAATCGCAGCGCAA
CGCCGCGATTCTCGAACTGCTGTATGCCACCGGCATCCGTGTCGCCGAACTGGTGTCGATGGATATCGCCGACATCGACT
TCTCCAATCGCACCATCAAAGTCACCGGCAAAGGCAACAAGCAACGCGTGGTGCCGTTCGGACTACCCGCCCAGCGTGCG
CTGGAGACTTGGCTGGAACAGGGGCGGCCGGTACTGGCCCGTACGGCAACGGATGCAGTCAAGTCCCGTGCTGCCAACGC
CCTGTTCCTCGGCGCACGAGGCGGCCGTATCGACCAACGCATAGCCCGTGACATCGTGCACAGAGCGGCCCGAGAGGCCG
GCGTGCCGGACATCAGCCCCCATGCGTTGCGTCATTCCGCCGCCACGCACATACTGGACGGCGGTGCCGATTTGAGGGAG
GTGCAGGAGATGCTCGGGCATTCCTCCTTGAAAACTACACAACGCTATACGCACGTCTCCATCGAGCAGCTCAAGAACCG
TTACGGACAGGCCTTTCCGCGGGCATGA

Upstream 100 bases:

>100_bases
CATCAGGAACAGATCGCCACATTGAAACCCGTGCCGGAGCGGCGTAACACGCCACCCCGGCCGTAACCCAAGGCCATAAA
GAATTCGGAGGAGAACGAGA

Downstream 100 bases:

>100_bases
CCACTATGTGGACATTGGTTAACAAACTCAGCAAAGACTGAACCTAGCCGGCAAGAACCCCTGAATTTTACATGGGTGTA
ACAAAAAATACACTGCTTGT

Product: site-specific tyrosine recombinase XerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSSTQFDGDIDSFVSYLKSNRGLSANTLKAYRADLTACLHLFELRGVTDLNEITLDDLRSWMAVESRDHARSSMARKTVA
VRGFFAWAYEHGLTATDPAATLMTPSIPSTLPAVLTESQAEQLLDVAEHAVATNQYKDDGGAAAASGSGKAAGKTADKSA
DTVNRSEAPARADKRDNARVTAESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVTGKGNKQRVVPFGLPAQRA
LETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQRIARDIVHRAAREAGVPDISPHALRHSAATHILDGGADLRE
VQEMLGHSSLKTTQRYTHVSIEQLKNRYGQAFPRA

Sequences:

>Translated_355_residues
MSSTQFDGDIDSFVSYLKSNRGLSANTLKAYRADLTACLHLFELRGVTDLNEITLDDLRSWMAVESRDHARSSMARKTVA
VRGFFAWAYEHGLTATDPAATLMTPSIPSTLPAVLTESQAEQLLDVAEHAVATNQYKDDGGAAAASGSGKAAGKTADKSA
DTVNRSEAPARADKRDNARVTAESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVTGKGNKQRVVPFGLPAQRA
LETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQRIARDIVHRAAREAGVPDISPHALRHSAATHILDGGADLRE
VQEMLGHSSLKTTQRYTHVSIEQLKNRYGQAFPRA
>Mature_354_residues
SSTQFDGDIDSFVSYLKSNRGLSANTLKAYRADLTACLHLFELRGVTDLNEITLDDLRSWMAVESRDHARSSMARKTVAV
RGFFAWAYEHGLTATDPAATLMTPSIPSTLPAVLTESQAEQLLDVAEHAVATNQYKDDGGAAAASGSGKAAGKTADKSAD
TVNRSEAPARADKRDNARVTAESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVTGKGNKQRVVPFGLPAQRAL
ETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQRIARDIVHRAAREAGVPDISPHALRHSAATHILDGGADLREV
QEMLGHSSLKTTQRYTHVSIEQLKNRYGQAFPRA

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789261, Length=350, Percent_Identity=32.8571428571429, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1790244, Length=175, Percent_Identity=41.1428571428571, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1790768, Length=154, Percent_Identity=30.5194805194805, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 38404; Mature: 38273

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTQFDGDIDSFVSYLKSNRGLSANTLKAYRADLTACLHLFELRGVTDLNEITLDDLRS
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
WMAVESRDHARSSMARKTVAVRGFFAWAYEHGLTATDPAATLMTPSIPSTLPAVLTESQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
EQLLDVAEHAVATNQYKDDGGAAAASGSGKAAGKTADKSADTVNRSEAPARADKRDNARV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEE
TAESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVTGKGNKQRVVPFGLPAQRA
EECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCHHHH
LETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQRIARDIVHRAAREAGVPDISP
HHHHHHCCCCEEEHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCH
HALRHSAATHILDGGADLREVQEMLGHSSLKTTQRYTHVSIEQLKNRYGQAFPRA
HHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSTQFDGDIDSFVSYLKSNRGLSANTLKAYRADLTACLHLFELRGVTDLNEITLDDLRS
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
WMAVESRDHARSSMARKTVAVRGFFAWAYEHGLTATDPAATLMTPSIPSTLPAVLTESQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
EQLLDVAEHAVATNQYKDDGGAAAASGSGKAAGKTADKSADTVNRSEAPARADKRDNARV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEE
TAESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVTGKGNKQRVVPFGLPAQRA
EECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCHHHH
LETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQRIARDIVHRAAREAGVPDISP
HHHHHHCCCCEEEHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCH
HALRHSAATHILDGGADLREVQEMLGHSSLKTTQRYTHVSIEQLKNRYGQAFPRA
HHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA