| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691801
Identifier: 213691801
GI number: 213691801
Start: 1072858
End: 1073685
Strand: Direct
Name: 213691801
Synonym: Blon_0909
Alternate gene names: NA
Gene position: 1072858-1073685 (Clockwise)
Preceding gene: 213691800
Following gene: 213691802
Centisome position: 37.87
GC content: 64.01
Gene sequence:
>828_bases ATGGGATTCGGCAATGTGTCCGAGCGCCGCAGCGCACCGCCACAGGTCGGCGTGTCAGTGGTGATTCTGGCACTCGGCCC GAAAGGCGATACCGGCAACAGTGCCGCCGATTCCGGCAACGCCGCGAACTCGGCCCATTCCCGTCTCTGGTTGCCCTTGG TCAAGCGCGTCCGTCAGCCGTTCCTGGGCTGCTGGGCATTGCCCGGCGGCGACCTGCGCTCCGACCGGTCGTTGGAACAG TCTGCCTACGCGGCCCTCGAATCGACCACAGACCTGCACCCGCGATACCTCGAACAGCTGTACACCTTTGGAGGCCCGAC CCGGTCTCATGGCGGATTACCCATGGTATCCGTCGTGTACTGGGCGCTCGTCGGCCAGACCGAGGCCGCGGGCTTCGAGG ATGGTGACAACGTACGATGGTTCCCCGAAGACGAACTGCCCGAGCTGGCGTTCGACCATCGCCAGATCATCGACTACGCG CTGCTCCGCCTGCGCTCCAAAATCGAATACTCCGACGTGGCCACCCGACTGCTCGGCCCCACGTTCACCCTGCGCCAACT GCACGGCGTCTATGAGGCGATTGGCGGCGAAACCCTCGACTTGGCGAACTTCCGCCGCAAAATGCTTGCCTCGGGAGATC TTGAAGACACCGGGGAGAAGGTGCGCGAAGGCCGCCAACGACCGGCCACCGTCTACCGCTACATCCCCAAACGACTTGTC GAGAACGGTACGCCCCACGAATCCGATGGCGACGACATCGTGGAACTGTCCAGACAAGGCGAGCGTGAAGACGCTCTCGA CGCGCTGATCCCATCCGCGCGCATCTGA
Upstream 100 bases:
>100_bases TGCGCTAGACCATCCAATATGTGATTTATGGTCATTGTGACTATAAGTAGTGCTATGCTCTCAATGCAGGGAGAACAACC GGTATGGAAAGAGGCATGGC
Downstream 100 bases:
>100_bases TTTTTCCCGCCGACCCGCTTCGGGCCGGCATCACAGACGTATATAGGAAAGGAACCGCTATGACCGCACTATCCACTGCG CCGTCCGTTGACGAGATCAT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: DNA Hydrolase; ADP-Ribose Pyrophosphatase; NUDIX Family Hydrolase; Nudix Hydrolase; MutT/Nudix Family Protein; Hydrolase NUDIX Family; Hydrolase; Hydrolase NUDIX Family Protein; DNA Hydrolase With MutT Domain-Containing Protein; Hydrolase MutT/Nudix Family Protein; NUDIX Domain-Containing Protein; Phosphohydrolase; MutT/NUDIX Family DNA Hydrolase; MutT/Nudix Family DNA Hydrolase; Nicotinic Acid Mononucleotide Biosynthesis Protein; Hydrolase Nudix Family; Nudix Hydrolase Family Protein; Nudix Superfamily Hydrolase; NTP Pyrophosphohydrolase; Protein Containing NUDIX Domain; DNA Hydrolase Protein MutT/Nudix Family; Acetohydroxy Acid Isomeroreductase
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MGFGNVSERRSAPPQVGVSVVILALGPKGDTGNSAADSGNAANSAHSRLWLPLVKRVRQPFLGCWALPGGDLRSDRSLEQ SAYAALESTTDLHPRYLEQLYTFGGPTRSHGGLPMVSVVYWALVGQTEAAGFEDGDNVRWFPEDELPELAFDHRQIIDYA LLRLRSKIEYSDVATRLLGPTFTLRQLHGVYEAIGGETLDLANFRRKMLASGDLEDTGEKVREGRQRPATVYRYIPKRLV ENGTPHESDGDDIVELSRQGEREDALDALIPSARI
Sequences:
>Translated_275_residues MGFGNVSERRSAPPQVGVSVVILALGPKGDTGNSAADSGNAANSAHSRLWLPLVKRVRQPFLGCWALPGGDLRSDRSLEQ SAYAALESTTDLHPRYLEQLYTFGGPTRSHGGLPMVSVVYWALVGQTEAAGFEDGDNVRWFPEDELPELAFDHRQIIDYA LLRLRSKIEYSDVATRLLGPTFTLRQLHGVYEAIGGETLDLANFRRKMLASGDLEDTGEKVREGRQRPATVYRYIPKRLV ENGTPHESDGDDIVELSRQGEREDALDALIPSARI >Mature_274_residues GFGNVSERRSAPPQVGVSVVILALGPKGDTGNSAADSGNAANSAHSRLWLPLVKRVRQPFLGCWALPGGDLRSDRSLEQS AYAALESTTDLHPRYLEQLYTFGGPTRSHGGLPMVSVVYWALVGQTEAAGFEDGDNVRWFPEDELPELAFDHRQIIDYAL LRLRSKIEYSDVATRLLGPTFTLRQLHGVYEAIGGETLDLANFRRKMLASGDLEDTGEKVREGRQRPATVYRYIPKRLVE NGTPHESDGDDIVELSRQGEREDALDALIPSARI
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30316; Mature: 30185
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFGNVSERRSAPPQVGVSVVILALGPKGDTGNSAADSGNAANSAHSRLWLPLVKRVRQP CCCCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FLGCWALPGGDLRSDRSLEQSAYAALESTTDLHPRYLEQLYTFGGPTRSHGGLPMVSVVY HHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH WALVGQTEAAGFEDGDNVRWFPEDELPELAFDHRQIIDYALLRLRSKIEYSDVATRLLGP HHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC TFTLRQLHGVYEAIGGETLDLANFRRKMLASGDLEDTGEKVREGRQRPATVYRYIPKRLV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH ENGTPHESDGDDIVELSRQGEREDALDALIPSARI CCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure GFGNVSERRSAPPQVGVSVVILALGPKGDTGNSAADSGNAANSAHSRLWLPLVKRVRQP CCCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FLGCWALPGGDLRSDRSLEQSAYAALESTTDLHPRYLEQLYTFGGPTRSHGGLPMVSVVY HHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH WALVGQTEAAGFEDGDNVRWFPEDELPELAFDHRQIIDYALLRLRSKIEYSDVATRLLGP HHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC TFTLRQLHGVYEAIGGETLDLANFRRKMLASGDLEDTGEKVREGRQRPATVYRYIPKRLV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH ENGTPHESDGDDIVELSRQGEREDALDALIPSARI CCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA