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The map label for this gene is scpB [H]

Identifier: 213691800

GI number: 213691800

Start: 1072010

End: 1072726

Strand: Direct

Name: scpB [H]

Synonym: Blon_0908

Alternate gene names: 213691800

Gene position: 1072010-1072726 (Clockwise)

Preceding gene: 213691799

Following gene: 213691801

Centisome position: 37.84

GC content: 62.9

Gene sequence:

>717_bases
GTGACTGAGCGGATTGACGCAACGAATGCAACCGAACACATGGCGGATACGGAATCGACGGCTGGATCCGCAAAGGCCGC
GGTGAGGGGAGTGGAGGAGGCGCGTCCCCAATACGTGGATTTCACGGTAGACGTTTTTCCCGGCGGGCTGCCCGCATGTC
TGGAAGCGATTCTGATGGTCTCCGACCAGCCGCAGACCGCCACCGAGCTGGCCCGTATTTTGGCATTGGACCGCAACACA
GTCGAAGGGGCATTGCAAGCCCTGCACGATGACTATGAGGGCGATGAATCCCGTGGCATCCGCCCGCGCGGCTTCGAACT
GCGCCGCACCGCTCGTGGCTGGCAGTTCGCCAGTCGCGCCGCGTTCGAGCCGGTCGTCTCATTATTCGTCACCGACGGCC
AGACTGCGAGACTCAGTCAGGCCGCACTGGAGGCGCTTGCCATCGTGGCCTATCGCCAGCCCGTCACCCGAGCCCAAGTG
GCCGCGATCCGCGGTGTCAACTCCGATGGCGTGATTCGCTCGCTCACGGTACGCGGCCTTATCAAGGAAGACGGCGTGGA
CCCCGAATCCCGCGCGGCCCTTTTGGTCACCTCCGAGTTCTTCCTCGACCAAATGGGACTGAAGAGTCTCGACGAACTAC
CCTCCCTGGCGCCGTTCCTCCCGCCCGTCGCCGAAATGACACAGTCGAAATCGGAAGACGCGGACGTGATTTCGTAG

Upstream 100 bases:

>100_bases
TCCGTTTGCCGAACTGCATCTGAGGTGGGTGCCCGGCGTAGACGAAACGATGAGCGACGTGAACATTTCCGAAGGCGATT
TTGCGTAAGGACGGCGACTG

Downstream 100 bases:

>100_bases
CGATTGGGGCCCGCTACCTGACCAATATTCGTGCGCTAGACCATCCAATATGTGATTTATGGTCATTGTGACTATAAGTA
GTGCTATGCTCTCAATGCAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTERIDATNATEHMADTESTAGSAKAAVRGVEEARPQYVDFTVDVFPGGLPACLEAILMVSDQPQTATELARILALDRNT
VEGALQALHDDYEGDESRGIRPRGFELRRTARGWQFASRAAFEPVVSLFVTDGQTARLSQAALEALAIVAYRQPVTRAQV
AAIRGVNSDGVIRSLTVRGLIKEDGVDPESRAALLVTSEFFLDQMGLKSLDELPSLAPFLPPVAEMTQSKSEDADVIS

Sequences:

>Translated_238_residues
MTERIDATNATEHMADTESTAGSAKAAVRGVEEARPQYVDFTVDVFPGGLPACLEAILMVSDQPQTATELARILALDRNT
VEGALQALHDDYEGDESRGIRPRGFELRRTARGWQFASRAAFEPVVSLFVTDGQTARLSQAALEALAIVAYRQPVTRAQV
AAIRGVNSDGVIRSLTVRGLIKEDGVDPESRAALLVTSEFFLDQMGLKSLDELPSLAPFLPPVAEMTQSKSEDADVIS
>Mature_237_residues
TERIDATNATEHMADTESTAGSAKAAVRGVEEARPQYVDFTVDVFPGGLPACLEAILMVSDQPQTATELARILALDRNTV
EGALQALHDDYEGDESRGIRPRGFELRRTARGWQFASRAAFEPVVSLFVTDGQTARLSQAALEALAIVAYRQPVTRAQVA
AIRGVNSDGVIRSLTVRGLIKEDGVDPESRAALLVTSEFFLDQMGLKSLDELPSLAPFLPPVAEMTQSKSEDADVIS

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 25675; Mature: 25544

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERIDATNATEHMADTESTAGSAKAAVRGVEEARPQYVDFTVDVFPGGLPACLEAILMV
CCCCCCCCCHHHHHHCCHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHH
SDQPQTATELARILALDRNTVEGALQALHDDYEGDESRGIRPRGFELRRTARGWQFASRA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHH
AFEPVVSLFVTDGQTARLSQAALEALAIVAYRQPVTRAQVAAIRGVNSDGVIRSLTVRGL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH
IKEDGVDPESRAALLVTSEFFLDQMGLKSLDELPSLAPFLPPVAEMTQSKSEDADVIS
HHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TERIDATNATEHMADTESTAGSAKAAVRGVEEARPQYVDFTVDVFPGGLPACLEAILMV
CCCCCCCCHHHHHHCCHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHH
SDQPQTATELARILALDRNTVEGALQALHDDYEGDESRGIRPRGFELRRTARGWQFASRA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHH
AFEPVVSLFVTDGQTARLSQAALEALAIVAYRQPVTRAQVAAIRGVNSDGVIRSLTVRGL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH
IKEDGVDPESRAALLVTSEFFLDQMGLKSLDELPSLAPFLPPVAEMTQSKSEDADVIS
HHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]