Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is glcK [H]

Identifier: 213691771

GI number: 213691771

Start: 1038389

End: 1039303

Strand: Direct

Name: glcK [H]

Synonym: Blon_0879

Alternate gene names: 213691771

Gene position: 1038389-1039303 (Clockwise)

Preceding gene: 213691766

Following gene: 213691773

Centisome position: 36.66

GC content: 62.84

Gene sequence:

>915_bases
ATGTCCGAAAACATTATGAACAATCTCAGAATCGGTGTTGACGTGGGCGGAACAAAAATCGAAGCTGTGCTGGTTGACGC
AATGGGCACGGTATTGGGTTCCACCCGCATTCCCGCCAGACATGGCAACGATGCCGTGATCGAAGACATCGTCGCTGTGG
CACATCAGGCGGCGGGTGAGCGTTTTGACGAGGTGAGCGCCATCGGCATCGGCACTCCTGGCACGGTGGATTCAGCCAGC
GGGCATGTGGGCAATATCGTGAATCTCGACGTGGTCTCGCTGGACATGGGGCCGTTGGTCTCGCAGCGTTCGGGCGTGCA
GGCCCATGTGGAAAACGACGTCAACGCCGCCGCCGTCGGTGCGGCCACCGTGTTGGGCGGTGCGGATGGCATGGCCGGTA
CCATTGCGTTCCTGAACTTCGGCACCGGACTGGCTGCGGGCATTGTCCAAAACGGCGTGCTGATGCATGGCTATAGCGGT
GCGGCCGGCGAAATCGGCCATATCCCAGTCGAACCTCATCGCCTCAAGTGCCCTTGCGGGCAATACGGATGCTTGGAAAC
CGTCTGCTCGGGCGCATCCGTGGGGCGTCTGTGGCCCAACGCCGACCCGCCGATGCCCGACCTGATTCGTCGCGCGAAAA
AGCGGGAGGCCGAGGCCGTCGATGTGCTGGACATGGTAGTGCGCGCCATCGGCGACACTATACAGATTCTGGCCCAATCC
GTTGATCCGCGGCTGATTATCTTGGGCGGCGGCATGGCCAAGACCGGCGAACCGTTGGTCGAGGTGATCACGGCTGAGCT
GCGCCGGCGCGAATCGCAATGCCGATTCCTCGAAACGCTGGACCTGCCGGCCCGGCTGCGTCTGGCACCCGTCGGCCAAC
CGGTTGGAGCCATCGGTGCCGCCATGGCGGCGTAG

Upstream 100 bases:

>100_bases
ATGTGAGTGTCGCCTTGGGTGAATTTGTTAAGATAGTTGTCAATAGTCGGATGCACACTTATACCAAGCGAAACGTTCGA
TGAAGAACAGGGGAGGGCTG

Downstream 100 bases:

>100_bases
CACTGGCATAGTGCCGGGGCATGGAAGATGAGGCGTCGGATTTGTCTCCGAGGCCCCATCTTCCACGCAGTCCTATATCG
CTTTATATCGTGCTGTGCCG

Product: ROK family protein

Products: NA

Alternate protein names: Glucose kinase [H]

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSENIMNNLRIGVDVGGTKIEAVLVDAMGTVLGSTRIPARHGNDAVIEDIVAVAHQAAGERFDEVSAIGIGTPGTVDSAS
GHVGNIVNLDVVSLDMGPLVSQRSGVQAHVENDVNAAAVGAATVLGGADGMAGTIAFLNFGTGLAAGIVQNGVLMHGYSG
AAGEIGHIPVEPHRLKCPCGQYGCLETVCSGASVGRLWPNADPPMPDLIRRAKKREAEAVDVLDMVVRAIGDTIQILAQS
VDPRLIILGGGMAKTGEPLVEVITAELRRRESQCRFLETLDLPARLRLAPVGQPVGAIGAAMAA

Sequences:

>Translated_304_residues
MSENIMNNLRIGVDVGGTKIEAVLVDAMGTVLGSTRIPARHGNDAVIEDIVAVAHQAAGERFDEVSAIGIGTPGTVDSAS
GHVGNIVNLDVVSLDMGPLVSQRSGVQAHVENDVNAAAVGAATVLGGADGMAGTIAFLNFGTGLAAGIVQNGVLMHGYSG
AAGEIGHIPVEPHRLKCPCGQYGCLETVCSGASVGRLWPNADPPMPDLIRRAKKREAEAVDVLDMVVRAIGDTIQILAQS
VDPRLIILGGGMAKTGEPLVEVITAELRRRESQCRFLETLDLPARLRLAPVGQPVGAIGAAMAA
>Mature_303_residues
SENIMNNLRIGVDVGGTKIEAVLVDAMGTVLGSTRIPARHGNDAVIEDIVAVAHQAAGERFDEVSAIGIGTPGTVDSASG
HVGNIVNLDVVSLDMGPLVSQRSGVQAHVENDVNAAAVGAATVLGGADGMAGTIAFLNFGTGLAAGIVQNGVLMHGYSGA
AGEIGHIPVEPHRLKCPCGQYGCLETVCSGASVGRLWPNADPPMPDLIRRAKKREAEAVDVLDMVVRAIGDTIQILAQSV
DPRLIILGGGMAKTGEPLVEVITAELRRRESQCRFLETLDLPARLRLAPVGQPVGAIGAAMAA

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1786891, Length=271, Percent_Identity=26.5682656826568, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI87081733, Length=279, Percent_Identity=30.4659498207885, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1787878, Length=235, Percent_Identity=27.6595744680851, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1787363, Length=284, Percent_Identity=27.4647887323944, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790522, Length=277, Percent_Identity=28.8808664259928, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR004654 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: =2.7.1.2 [H]

Molecular weight: Translated: 31266; Mature: 31135

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENIMNNLRIGVDVGGTKIEAVLVDAMGTVLGSTRIPARHGNDAVIEDIVAVAHQAAGE
CCCCHHCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
RFDEVSAIGIGTPGTVDSASGHVGNIVNLDVVSLDMGPLVSQRSGVQAHVENDVNAAAVG
HHHHHEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHCCCCCEEECCCCCCHHHHH
AATVLGGADGMAGTIAFLNFGTGLAAGIVQNGVLMHGYSGAAGEIGHIPVEPHRLKCPCG
HHHHCCCCCCCHHHHHEEECCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEECCCC
QYGCLETVCSGASVGRLWPNADPPMPDLIRRAKKREAEAVDVLDMVVRAIGDTIQILAQS
CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VDPRLIILGGGMAKTGEPLVEVITAELRRRESQCRFLETLDLPARLRLAPVGQPVGAIGA
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH
AMAA
HHCC
>Mature Secondary Structure 
SENIMNNLRIGVDVGGTKIEAVLVDAMGTVLGSTRIPARHGNDAVIEDIVAVAHQAAGE
CCCHHCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
RFDEVSAIGIGTPGTVDSASGHVGNIVNLDVVSLDMGPLVSQRSGVQAHVENDVNAAAVG
HHHHHEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHCCCCCEEECCCCCCHHHHH
AATVLGGADGMAGTIAFLNFGTGLAAGIVQNGVLMHGYSGAAGEIGHIPVEPHRLKCPCG
HHHHCCCCCCCHHHHHEEECCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEECCCC
QYGCLETVCSGASVGRLWPNADPPMPDLIRRAKKREAEAVDVLDMVVRAIGDTIQILAQS
CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VDPRLIILGGGMAKTGEPLVEVITAELRRRESQCRFLETLDLPARLRLAPVGQPVGAIGA
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH
AMAA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]