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The map label for this gene is ytbD [H]

Identifier: 213691725

GI number: 213691725

Start: 976835

End: 978046

Strand: Direct

Name: ytbD [H]

Synonym: Blon_0831

Alternate gene names: 213691725

Gene position: 976835-978046 (Clockwise)

Preceding gene: 213691724

Following gene: 213691726

Centisome position: 34.48

GC content: 65.26

Gene sequence:

>1212_bases
ATGAACGCACCGATGGACGGAGCAGGTGCCGGTCGTTTCTTCAACCCGCAGGTCGCCGTCCTGGTGACCGTCACCTTCAT
GCTGGGCATGAGCGAATTCGTGGTGGTCGGCATCCTTCCCGACATCGCCTCCGGCCTTCGGGTCTCCGAGGTGACCGCGG
GCAATCTGGTGGCCCTCTTCGCGTTCGTGTACGCGCCCTGCACGCCGCTCGGCTCCGCCCTGTCGGCGCGGTTCCCCCGC
TTCGCCACCTATATGGCGCTGATGGGCGTGTTCCTGGCGGGCAATGTCCTGTGCGTCCTCGCGCCGAACTATCCGGTGCT
GCTGGTCGCCCGGCTGCTCATCGCGTCGGTGTCCGGCACGCTGGTGGCCGTTTCCATGACCTTCGCGCCCGACGTGACCG
AGGACAGATACCGCACCAAGTTCATCGCCTGGGTGTTTTCGGGATTCTCCATCGCCTCCGTGGTCGGTGTGCCGGTTGGC
ACCTGGGTTGCCGCCGCCTTCGGCTGGCGGGCCTCCTTCGCCCTGATTTCGATCCTCACCGCCATGCTGATGGCGCTGAT
GGCCGTGGTGCTGCCGCGTAATTCCCACCCGGCGCGAATCGGGTTCCTCCGGCAGTTCCGCCTGTTCTTCGACCGTCGCA
TCCAGCTTGGCGTGGCGGACGTGGTGTTCGGTGCGGCCGCATCCTATGTCTTCTACACCTATCTGACGCCTATCATGCGC
GACGAGATCGGTGTGCCCGAGCACATGATCAGCATCGGCCTGGTGATATACGGTTGCGCCTGCCTGTGGAGCAACCTGTA
CGGCGGCACGTTGGCCGACAAGGGACATGGCGTGGAGCCGTTGACCCACATGCGCCCGGTCTACGGCGCTCAGGCCGTCT
GCCTGTGCCTACTGGCGTTCGCGTCGCTGGTGCCGGTCGCCGGAGCTCTGCTGCTGGTGGCGCTCGGCATGTTCATGTAC
CTGCAGAACGCCTCCTCCCAGGTGCTGTACATGGACGTGGCGTACCAGTCCCACCCCGGTTCGGTGAATCTGGCCGCTTC
CCTGAATTCCATGTCGTTCAACATCGGCATCGCCATCGGCTCCGCGGTCGGAGGCATGGTCAACGACGCCCTTGGTCTGG
CTTGGCTTGGTCCGTTCGGCGCGATATTCGCGCTGCTCGCGGTCGGCACCACGACCCTGCTGCGTCCGTACGTCAGCCCG
GTCGGGGAATGA

Upstream 100 bases:

>100_bases
GATAACAAGCACCAGGAGTGGGAGGACTACAATCATCAGGTCACGCCGTTCGAACTGAAGAAGTACCTGCCGAAGCTGTG
ATGGAGGAGAGTGTCCCGAG

Downstream 100 bases:

>100_bases
CGGGTGGCGTGACGCGCGGGAACGAAGGTTTTTTCCCGCGTGTCCCCGCGGCATGCCTTATCCGCCGATTGCCGTCCATT
GATAACCTGCTATCCAAATA

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNAPMDGAGAGRFFNPQVAVLVTVTFMLGMSEFVVVGILPDIASGLRVSEVTAGNLVALFAFVYAPCTPLGSALSARFPR
FATYMALMGVFLAGNVLCVLAPNYPVLLVARLLIASVSGTLVAVSMTFAPDVTEDRYRTKFIAWVFSGFSIASVVGVPVG
TWVAAAFGWRASFALISILTAMLMALMAVVLPRNSHPARIGFLRQFRLFFDRRIQLGVADVVFGAAASYVFYTYLTPIMR
DEIGVPEHMISIGLVIYGCACLWSNLYGGTLADKGHGVEPLTHMRPVYGAQAVCLCLLAFASLVPVAGALLLVALGMFMY
LQNASSQVLYMDVAYQSHPGSVNLAASLNSMSFNIGIAIGSAVGGMVNDALGLAWLGPFGAIFALLAVGTTTLLRPYVSP
VGE

Sequences:

>Translated_403_residues
MNAPMDGAGAGRFFNPQVAVLVTVTFMLGMSEFVVVGILPDIASGLRVSEVTAGNLVALFAFVYAPCTPLGSALSARFPR
FATYMALMGVFLAGNVLCVLAPNYPVLLVARLLIASVSGTLVAVSMTFAPDVTEDRYRTKFIAWVFSGFSIASVVGVPVG
TWVAAAFGWRASFALISILTAMLMALMAVVLPRNSHPARIGFLRQFRLFFDRRIQLGVADVVFGAAASYVFYTYLTPIMR
DEIGVPEHMISIGLVIYGCACLWSNLYGGTLADKGHGVEPLTHMRPVYGAQAVCLCLLAFASLVPVAGALLLVALGMFMY
LQNASSQVLYMDVAYQSHPGSVNLAASLNSMSFNIGIAIGSAVGGMVNDALGLAWLGPFGAIFALLAVGTTTLLRPYVSP
VGE
>Mature_403_residues
MNAPMDGAGAGRFFNPQVAVLVTVTFMLGMSEFVVVGILPDIASGLRVSEVTAGNLVALFAFVYAPCTPLGSALSARFPR
FATYMALMGVFLAGNVLCVLAPNYPVLLVARLLIASVSGTLVAVSMTFAPDVTEDRYRTKFIAWVFSGFSIASVVGVPVG
TWVAAAFGWRASFALISILTAMLMALMAVVLPRNSHPARIGFLRQFRLFFDRRIQLGVADVVFGAAASYVFYTYLTPIMR
DEIGVPEHMISIGLVIYGCACLWSNLYGGTLADKGHGVEPLTHMRPVYGAQAVCLCLLAFASLVPVAGALLLVALGMFMY
LQNASSQVLYMDVAYQSHPGSVNLAASLNSMSFNIGIAIGSAVGGMVNDALGLAWLGPFGAIFALLAVGTTTLLRPYVSP
VGE

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=249, Percent_Identity=29.3172690763052, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786595, Length=361, Percent_Identity=24.3767313019391, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787808, Length=370, Percent_Identity=24.8648648648649, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42629; Mature: 42629

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPMDGAGAGRFFNPQVAVLVTVTFMLGMSEFVVVGILPDIASGLRVSEVTAGNLVALF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCHHHHCCCEEEHCCCCHHHHHH
AFVYAPCTPLGSALSARFPRFATYMALMGVFLAGNVLCVLAPNYPVLLVARLLIASVSGT
HHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCC
LVAVSMTFAPDVTEDRYRTKFIAWVFSGFSIASVVGVPVGTWVAAAFGWRASFALISILT
EEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AMLMALMAVVLPRNSHPARIGFLRQFRLFFDRRIQLGVADVVFGAAASYVFYTYLTPIMR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIGVPEHMISIGLVIYGCACLWSNLYGGTLADKGHGVEPLTHMRPVYGAQAVCLCLLAF
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCHHCCHHHHHHHHHHH
ASLVPVAGALLLVALGMFMYLQNASSQVLYMDVAYQSHPGSVNLAASLNSMSFNIGIAIG
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEEEEEH
SAVGGMVNDALGLAWLGPFGAIFALLAVGTTTLLRPYVSPVGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNAPMDGAGAGRFFNPQVAVLVTVTFMLGMSEFVVVGILPDIASGLRVSEVTAGNLVALF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCHHHHCCCEEEHCCCCHHHHHH
AFVYAPCTPLGSALSARFPRFATYMALMGVFLAGNVLCVLAPNYPVLLVARLLIASVSGT
HHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCC
LVAVSMTFAPDVTEDRYRTKFIAWVFSGFSIASVVGVPVGTWVAAAFGWRASFALISILT
EEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AMLMALMAVVLPRNSHPARIGFLRQFRLFFDRRIQLGVADVVFGAAASYVFYTYLTPIMR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIGVPEHMISIGLVIYGCACLWSNLYGGTLADKGHGVEPLTHMRPVYGAQAVCLCLLAF
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCHHCCHHHHHHHHHHH
ASLVPVAGALLLVALGMFMYLQNASSQVLYMDVAYQSHPGSVNLAASLNSMSFNIGIAIG
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEEEEEH
SAVGGMVNDALGLAWLGPFGAIFALLAVGTTTLLRPYVSPVGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]