| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is glnA [H]
Identifier: 213691724
GI number: 213691724
Start: 975478
End: 976815
Strand: Direct
Name: glnA [H]
Synonym: Blon_0830
Alternate gene names: 213691724
Gene position: 975478-976815 (Clockwise)
Preceding gene: 213691723
Following gene: 213691725
Centisome position: 34.44
GC content: 62.86
Gene sequence:
>1338_bases ATGGATAAACAGCAGGAGTTTGCGCTGCGCACGGTCGAAGAACGCGACGTGCGCTTTATTCGTCTGTGGTTCACGGACGT GTTGGGAACACTGAAGTCCGTGGCGATTGCTCCGGCCGAACTGGAAGCCGCGTTCGAGGAGGGGCTCGGCTTCGACGGCT CCGCCATCGAGGGCATGACCCGTGTATCCGAGGACGACATGATCGTCCAGCCCGACCCTTCGACGTTCCAGATTCTGCCG TGGCGGGGCGGCCCGCAAGGCACGGCCCGCATGTTCTGCGACATCCTGACCCCGGACGGCGAACCCTCGCTCGGCGATCC CCGGCATGTGCTGAAGCGCACGCTCGCCAAGGCCAAGGACAAGGGCTTCACGTTCTACGTGCATCCGGAAATCGAGTTCT ACCTGTTCGAAAGCCAGGACGACTGGTCCAAGACCCCGACCCCGATCGACGAGGGCGGCTACTTCGACCACGTGCCGCGC AGCCCAGGCATGGACTTCCGCCGCGCCACCGTGAACATGCTCGAGCAAATGGGCATCTCGGTGGAATACTCGCACCATGA GGCGGGGCCAGGCCAGAACGAGATCGATCTGCGATACGCGGACGCGCTCACCATGGCCGACAACATCATGACATTCCGTA CGGTGGTCAAGGAGATTTCCTTGGAGCGCGGCATCCACGCCAGCTTCATGCCCAAGCCCCTGGCCGACGCGCCCGGTTCC GGCATGCACACGCACCTGAGCCTGTTCGAAGGCGATTCCAACGCCTTCTACGAGGCCGGTCAGGAGTTCAACATGTCCCT GACCGCCCGCCAGTTCGCCGCCGGCGTCCTGTACCATGCGGCCGAAATCTGCGCGGTCACCGACCAGTACGTCAACTCGT ACAAGCGCCTGTGGGGCGGCAACGAGGCGCCGAGCTACATCTGCTGGGGCCACAACAACCGTTCCGCGCTGCTGCGTATC CCGCAGTACAAGCCGGGCAAGGGCAACTCCGCGCGCATGGAGTTCCGTGCGCTCGACCCGGTGGCCAACCCATACCTTGC CTACTCGGTGCTGTTGGCCGCCGGTCTCGATGGCATCGATAAGCAGATGCAGTTGGGCGAGCCCACCAGTGATGACGTGT GGGAGCTCACCGACGGCGAACGTCAGGCTATGGGCATTCAGCCGCTGCCGCGCTCGCTGGACGAGGCGCTGAAGATCATG GAGAAATCCGACTTCGTGGCCGACGTGCTTGGCGAACACGCCTTCGGCTACTTCCTGGATAACAAGCACCAGGAGTGGGA GGACTACAATCATCAGGTCACGCCGTTCGAACTGAAGAAGTACCTGCCGAAGCTGTGA
Upstream 100 bases:
>100_bases ATGCGGACCGGGGCATGTTGATGAAATATCGCGACTCGCTGGTGACGAACAGTGAGATGTTAACGCCCCTCGTAACACGG TTATGGAACGATAGGCGACT
Downstream 100 bases:
>100_bases TGGAGGAGAGTGTCCCGAGATGAACGCACCGATGGACGGAGCAGGTGCCGGTCGTTTCTTCAACCCGCAGGTCGCCGTCC TGGTGACCGTCACCTTCATG
Product: glutamine synthetase, type I
Products: NA
Alternate protein names: Glutamate--ammonia ligase 2 [H]
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MDKQQEFALRTVEERDVRFIRLWFTDVLGTLKSVAIAPAELEAAFEEGLGFDGSAIEGMTRVSEDDMIVQPDPSTFQILP WRGGPQGTARMFCDILTPDGEPSLGDPRHVLKRTLAKAKDKGFTFYVHPEIEFYLFESQDDWSKTPTPIDEGGYFDHVPR SPGMDFRRATVNMLEQMGISVEYSHHEAGPGQNEIDLRYADALTMADNIMTFRTVVKEISLERGIHASFMPKPLADAPGS GMHTHLSLFEGDSNAFYEAGQEFNMSLTARQFAAGVLYHAAEICAVTDQYVNSYKRLWGGNEAPSYICWGHNNRSALLRI PQYKPGKGNSARMEFRALDPVANPYLAYSVLLAAGLDGIDKQMQLGEPTSDDVWELTDGERQAMGIQPLPRSLDEALKIM EKSDFVADVLGEHAFGYFLDNKHQEWEDYNHQVTPFELKKYLPKL
Sequences:
>Translated_445_residues MDKQQEFALRTVEERDVRFIRLWFTDVLGTLKSVAIAPAELEAAFEEGLGFDGSAIEGMTRVSEDDMIVQPDPSTFQILP WRGGPQGTARMFCDILTPDGEPSLGDPRHVLKRTLAKAKDKGFTFYVHPEIEFYLFESQDDWSKTPTPIDEGGYFDHVPR SPGMDFRRATVNMLEQMGISVEYSHHEAGPGQNEIDLRYADALTMADNIMTFRTVVKEISLERGIHASFMPKPLADAPGS GMHTHLSLFEGDSNAFYEAGQEFNMSLTARQFAAGVLYHAAEICAVTDQYVNSYKRLWGGNEAPSYICWGHNNRSALLRI PQYKPGKGNSARMEFRALDPVANPYLAYSVLLAAGLDGIDKQMQLGEPTSDDVWELTDGERQAMGIQPLPRSLDEALKIM EKSDFVADVLGEHAFGYFLDNKHQEWEDYNHQVTPFELKKYLPKL >Mature_445_residues MDKQQEFALRTVEERDVRFIRLWFTDVLGTLKSVAIAPAELEAAFEEGLGFDGSAIEGMTRVSEDDMIVQPDPSTFQILP WRGGPQGTARMFCDILTPDGEPSLGDPRHVLKRTLAKAKDKGFTFYVHPEIEFYLFESQDDWSKTPTPIDEGGYFDHVPR SPGMDFRRATVNMLEQMGISVEYSHHEAGPGQNEIDLRYADALTMADNIMTFRTVVKEISLERGIHASFMPKPLADAPGS GMHTHLSLFEGDSNAFYEAGQEFNMSLTARQFAAGVLYHAAEICAVTDQYVNSYKRLWGGNEAPSYICWGHNNRSALLRI PQYKPGKGNSARMEFRALDPVANPYLAYSVLLAAGLDGIDKQMQLGEPTSDDVWELTDGERQAMGIQPLPRSLDEALKIM EKSDFVADVLGEHAFGYFLDNKHQEWEDYNHQVTPFELKKYLPKL
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=434, Percent_Identity=26.2672811059908, Blast_Score=129, Evalue=5e-30, Organism=Escherichia coli, GI1790301, Length=425, Percent_Identity=36.9411764705882, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI87081870, Length=454, Percent_Identity=26.431718061674, Blast_Score=138, Evalue=8e-34,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 50068; Mature: 50068
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQQEFALRTVEERDVRFIRLWFTDVLGTLKSVAIAPAELEAAFEEGLGFDGSAIEGMT CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHH RVSEDDMIVQPDPSTFQILPWRGGPQGTARMFCDILTPDGEPSLGDPRHVLKRTLAKAKD HCCCCCEEECCCCCCEEEEECCCCCCCHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCC KGFTFYVHPEIEFYLFESQDDWSKTPTPIDEGGYFDHVPRSPGMDFRRATVNMLEQMGIS CCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCE VEYSHHEAGPGQNEIDLRYADALTMADNIMTFRTVVKEISLERGIHASFMPKPLADAPGS EEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GMHTHLSLFEGDSNAFYEAGQEFNMSLTARQFAAGVLYHAAEICAVTDQYVNSYKRLWGG CCEEEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NEAPSYICWGHNNRSALLRIPQYKPGKGNSARMEFRALDPVANPYLAYSVLLAAGLDGID CCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC KQMQLGEPTSDDVWELTDGERQAMGIQPLPRSLDEALKIMEKSDFVADVLGEHAFGYFLD HHHHCCCCCCCCCEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NKHQEWEDYNHQVTPFELKKYLPKL CCCCHHHCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MDKQQEFALRTVEERDVRFIRLWFTDVLGTLKSVAIAPAELEAAFEEGLGFDGSAIEGMT CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHH RVSEDDMIVQPDPSTFQILPWRGGPQGTARMFCDILTPDGEPSLGDPRHVLKRTLAKAKD HCCCCCEEECCCCCCEEEEECCCCCCCHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCC KGFTFYVHPEIEFYLFESQDDWSKTPTPIDEGGYFDHVPRSPGMDFRRATVNMLEQMGIS CCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCE VEYSHHEAGPGQNEIDLRYADALTMADNIMTFRTVVKEISLERGIHASFMPKPLADAPGS EEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GMHTHLSLFEGDSNAFYEAGQEFNMSLTARQFAAGVLYHAAEICAVTDQYVNSYKRLWGG CCEEEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NEAPSYICWGHNNRSALLRIPQYKPGKGNSARMEFRALDPVANPYLAYSVLLAAGLDGID CCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC KQMQLGEPTSDDVWELTDGERQAMGIQPLPRSLDEALKIMEKSDFVADVLGEHAFGYFLD HHHHCCCCCCCCCEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NKHQEWEDYNHQVTPFELKKYLPKL CCCCHHHCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA