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The map label for this gene is dppC [H]

Identifier: 213691726

GI number: 213691726

Start: 978287

End: 979210

Strand: Direct

Name: dppC [H]

Synonym: Blon_0832

Alternate gene names: 213691726

Gene position: 978287-979210 (Clockwise)

Preceding gene: 213691725

Following gene: 213691727

Centisome position: 34.53

GC content: 67.97

Gene sequence:

>924_bases
ATGACGGATGCGACTGCGAAAGCCGCGCCGAAGGCGGAAAGACGGCGGCGCGTTCTCCGTTCCGGCGCTCGCTCATCGAT
AGTGGTCGGCGGCGCCATCGTGCTGTTCTTCGTGCTGCTGGCGGTGCTGGCCGGGCCGTTGTCGGCCATCACCGGCAACG
ACCCGTACGCCGAGCATCCCGAGGCCTTGGGTGCCGGGTCGGTGCCGGCCGGATTCGGCGGCGGCATCAGTGCCCGGCAC
TGGTTCGGCGTCACCCCGCTGCGCGGCGTCGACCTGTTCTCCATCGTGGCGTACGGCTCACGGATCTCGCTGGGCATCGG
CGTCGTCTCGTCGGTCATCTCGCTGGTCATCGGCGTGGCGCTCGGGCTGCTGGCCGGCTATTTCCCCGGGTTGGTCGATG
CGCTGATCTCGCGCACGATGGACGTCTTCTTCGGCTTCCCGTTCCTGATCTTCGCGATCGCGCTGTCGGCGGTGGTGCCG
CAGAGCTTCCCGAGGCCGGTGCTGCTGACGCTAGTGCTCGGATTCTTCGGATGGCCCGGCATCGCGCGTCTTGTCCGGGG
GCAGACGCTGACGCTGAGCAAGCGCAATTTCGCCGTCGCGTCCAAGGTGATGGGCGCCTCGCCTGCCCATGTGCTGTGGC
ATCAGATCCTGCCGAACCTCATGCCGCTGCTCATCGTCAACATCACGCTGTCGATCCCCGGGCGCATCGGCGCCGAGGCG
GGCCTGTCGTTCCTCGGCGTCGGCATGAACCCGCCGACGCCCTCATGGGGCCGGTCCATCTCCGACGCCGTGCAGTGGGC
CCTGGTCGACCCGATGTATCTGATCTTCCCGGGCGCCGCCCTGTTCCTGCTGACCTTCGGCTTCAACCTGCTTGGCGATG
GCCTGAGCGACGCCATCGACCCGCGCAAGGGGGTGCGTGCATGA

Upstream 100 bases:

>100_bases
AATGTTAGGACACCGGCTGCAGGGGGACCCGGCTCACGGGCGCCCACCTGCGCGGATTGATGATTATCGGCATGTTCAGC
GTGAAAATGGGGATGACAAT

Downstream 100 bases:

>100_bases
GAATCCTGCAATACATCGGCAAGCGCGTGGCGAGCTCGATCGTCGTCATCCTGCTCATCACGCTGGCGCTGTTCCTGATC
TTCTTCCTGCTGCCGACCAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTDATAKAAPKAERRRRVLRSGARSSIVVGGAIVLFFVLLAVLAGPLSAITGNDPYAEHPEALGAGSVPAGFGGGISARH
WFGVTPLRGVDLFSIVAYGSRISLGIGVVSSVISLVIGVALGLLAGYFPGLVDALISRTMDVFFGFPFLIFAIALSAVVP
QSFPRPVLLTLVLGFFGWPGIARLVRGQTLTLSKRNFAVASKVMGASPAHVLWHQILPNLMPLLIVNITLSIPGRIGAEA
GLSFLGVGMNPPTPSWGRSISDAVQWALVDPMYLIFPGAALFLLTFGFNLLGDGLSDAIDPRKGVRA

Sequences:

>Translated_307_residues
MTDATAKAAPKAERRRRVLRSGARSSIVVGGAIVLFFVLLAVLAGPLSAITGNDPYAEHPEALGAGSVPAGFGGGISARH
WFGVTPLRGVDLFSIVAYGSRISLGIGVVSSVISLVIGVALGLLAGYFPGLVDALISRTMDVFFGFPFLIFAIALSAVVP
QSFPRPVLLTLVLGFFGWPGIARLVRGQTLTLSKRNFAVASKVMGASPAHVLWHQILPNLMPLLIVNITLSIPGRIGAEA
GLSFLGVGMNPPTPSWGRSISDAVQWALVDPMYLIFPGAALFLLTFGFNLLGDGLSDAIDPRKGVRA
>Mature_306_residues
TDATAKAAPKAERRRRVLRSGARSSIVVGGAIVLFFVLLAVLAGPLSAITGNDPYAEHPEALGAGSVPAGFGGGISARHW
FGVTPLRGVDLFSIVAYGSRISLGIGVVSSVISLVIGVALGLLAGYFPGLVDALISRTMDVFFGFPFLIFAIALSAVVPQ
SFPRPVLLTLVLGFFGWPGIARLVRGQTLTLSKRNFAVASKVMGASPAHVLWHQILPNLMPLLIVNITLSIPGRIGAEAG
LSFLGVGMNPPTPSWGRSISDAVQWALVDPMYLIFPGAALFLLTFGFNLLGDGLSDAIDPRKGVRA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=232, Percent_Identity=43.1034482758621, Blast_Score=168, Evalue=4e-43,
Organism=Escherichia coli, GI1787760, Length=308, Percent_Identity=34.4155844155844, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1787498, Length=301, Percent_Identity=34.21926910299, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789964, Length=248, Percent_Identity=38.7096774193548, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789889, Length=226, Percent_Identity=34.9557522123894, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787549, Length=249, Percent_Identity=27.710843373494, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1788505, Length=229, Percent_Identity=29.6943231441048, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32125; Mature: 31994

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDATAKAAPKAERRRRVLRSGARSSIVVGGAIVLFFVLLAVLAGPLSAITGNDPYAEHP
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC
EALGAGSVPAGFGGGISARHWFGVTPLRGVDLFSIVAYGSRISLGIGVVSSVISLVIGVA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LGLLAGYFPGLVDALISRTMDVFFGFPFLIFAIALSAVVPQSFPRPVLLTLVLGFFGWPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH
IARLVRGQTLTLSKRNFAVASKVMGASPAHVLWHQILPNLMPLLIVNITLSIPGRIGAEA
HHHHHCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHH
GLSFLGVGMNPPTPSWGRSISDAVQWALVDPMYLIFPGAALFLLTFGFNLLGDGLSDAID
CCCEEECCCCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PRKGVRA
CCCCCCC
>Mature Secondary Structure 
TDATAKAAPKAERRRRVLRSGARSSIVVGGAIVLFFVLLAVLAGPLSAITGNDPYAEHP
CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC
EALGAGSVPAGFGGGISARHWFGVTPLRGVDLFSIVAYGSRISLGIGVVSSVISLVIGVA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LGLLAGYFPGLVDALISRTMDVFFGFPFLIFAIALSAVVPQSFPRPVLLTLVLGFFGWPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH
IARLVRGQTLTLSKRNFAVASKVMGASPAHVLWHQILPNLMPLLIVNITLSIPGRIGAEA
HHHHHCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHH
GLSFLGVGMNPPTPSWGRSISDAVQWALVDPMYLIFPGAALFLLTFGFNLLGDGLSDAID
CCCEEECCCCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PRKGVRA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]