| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691680
Identifier: 213691680
GI number: 213691680
Start: 910176
End: 911246
Strand: Reverse
Name: 213691680
Synonym: Blon_0785
Alternate gene names: NA
Gene position: 911246-910176 (Counterclockwise)
Preceding gene: 213691681
Following gene: 213691679
Centisome position: 32.17
GC content: 59.76
Gene sequence:
>1071_bases ATGAAGAAAAGCCTTGTATCCAAGGCCGCTGCCCTCGTGGGCGCCCTTGCTATGACTTTCGGTTTCGCCGCATGTGGCCA GACCAACACCGCCGACTCCTCCAACTCCAACACCTCCGACCTCAAGAAGGTCACTTTCATGCTCTCCTGGGCACCCGATA CCAACCACATCGGCGTGTACGTGGCCAAGAACAAGGGCTACTTCAAGGACGCCGGCCTTGACGTGGATATCGTGGCCGTG GCCCAGGCTGGTGCCGAACAAGCCGTGAACAACGGTGTGGCCGACTTCGCCCTGTCCAACCTGACCAACGTGGGCATCTA CACGCTGAAGGGCGCTCACATCAAGCAGGTGCTGCAGGTGCAGCAGAAGCCGAGCGCCATTTGGTGCGCACTGGCGTCCA ACGCCGCCATCAAGTCCCCTAAGGATTTTGATGGCAAGACCTTCGCCACCTTCGGCTCCAACGAGTCCGATGCCGTGGTG CGCCGCATGATCCAAACCGATGGCGGCAAGGGCGAGTTCGACAAGGTGACCGTCGGCACCTCCACCTTCCAGACCATGGA ATCCGGCAAGGCCGATTTCGGCGGCTTCTACGCCACGTGGGAAGGCGTGCAGGCCGACATGTACGGCCCGAAGCTCAACT GCTTCACCGAGCCCGACTACGGCGTGCCCGGCAACGCCGACGCCATCGGCATCATCACCAACGACAAGACCATCAAGAAC AATCCCGACCTGGTCAAGAAGTTCACTCAGGCCACTCAGAAGGGTTACGAGTACGCGTACGCCAACCCGGATGACGCCGC GCAGATTCTCGTGGACGAAGCCCCTGACGCCAACCTCAAGCCCGAATTCGTCAAGAAGAGCATGCAGGTTATCGTCGACG GCCAGTACTGGGGCGATCCGGCCAAGATCAAGGACGGCTCTTTCGTGCTCGGCACCAACGACTTCAAGGGCACTCAGGAA TACTTCGACTTCCTGGCTGAAGAAGACGCTTACACCGACAGTCACGACAAGGTGATTCATGAGGCCCCGCAGGCCAAGGA CCTTGCTACCGACGAGTTCCTCGGCAAGTAA
Upstream 100 bases:
>100_bases TCGAACGGAAATCAAGGCCCTCCATATCGTTTTCTGCCGACTTCCGTTCGAAGCAATCCCAGAGAACGATAGAGAGACAA CGAATTAGGGAACCATCATT
Downstream 100 bases:
>100_bases TTTCCGATATTCCGAGTTTGAATCTACGAAAGAATGCGTCCTTTCCATGAGGAAAGGACGCATTTTTGTGTATCGGCCGA TAAGGTTATTCATAGCGGAT
Product: membrane lipoprotein lipid attachment site
Products: NA
Alternate protein names: NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5-Like Domain-Containing Protein; NMT1/THI5-Like Protein; Membrane Lipoprotein Lipid Attachment Site; ABC Transporter; Pyrimidine Biosynthesis; NMT1/THI5 Like Family; Diguanylate Cyclase; Thiamine Biosynthesis Protein; Histidine Kinase; Nitrate/Sulfonate/Bicarbonate ABC Transporter; Nitrate/Sulfonate ABC Transporter; Diguanylate Cyclase/Phosphodiesterase; NlpA Lipoprotein; NMT1/THI5-Ike Domain-Containing Protein; Pyrimidine Biosynthesis; Pyrimidine Biosynthesis ; ABC Transporter Permease; Two-Component Sensor Histidine Kinase; Thiamine Biosynthesis; Diguanylate Cyclase With Extracellular Sensor; NMT1/THI5 Like Protein
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKKSLVSKAAALVGALAMTFGFAACGQTNTADSSNSNTSDLKKVTFMLSWAPDTNHIGVYVAKNKGYFKDAGLDVDIVAV AQAGAEQAVNNGVADFALSNLTNVGIYTLKGAHIKQVLQVQQKPSAIWCALASNAAIKSPKDFDGKTFATFGSNESDAVV RRMIQTDGGKGEFDKVTVGTSTFQTMESGKADFGGFYATWEGVQADMYGPKLNCFTEPDYGVPGNADAIGIITNDKTIKN NPDLVKKFTQATQKGYEYAYANPDDAAQILVDEAPDANLKPEFVKKSMQVIVDGQYWGDPAKIKDGSFVLGTNDFKGTQE YFDFLAEEDAYTDSHDKVIHEAPQAKDLATDEFLGK
Sequences:
>Translated_356_residues MKKSLVSKAAALVGALAMTFGFAACGQTNTADSSNSNTSDLKKVTFMLSWAPDTNHIGVYVAKNKGYFKDAGLDVDIVAV AQAGAEQAVNNGVADFALSNLTNVGIYTLKGAHIKQVLQVQQKPSAIWCALASNAAIKSPKDFDGKTFATFGSNESDAVV RRMIQTDGGKGEFDKVTVGTSTFQTMESGKADFGGFYATWEGVQADMYGPKLNCFTEPDYGVPGNADAIGIITNDKTIKN NPDLVKKFTQATQKGYEYAYANPDDAAQILVDEAPDANLKPEFVKKSMQVIVDGQYWGDPAKIKDGSFVLGTNDFKGTQE YFDFLAEEDAYTDSHDKVIHEAPQAKDLATDEFLGK >Mature_356_residues MKKSLVSKAAALVGALAMTFGFAACGQTNTADSSNSNTSDLKKVTFMLSWAPDTNHIGVYVAKNKGYFKDAGLDVDIVAV AQAGAEQAVNNGVADFALSNLTNVGIYTLKGAHIKQVLQVQQKPSAIWCALASNAAIKSPKDFDGKTFATFGSNESDAVV RRMIQTDGGKGEFDKVTVGTSTFQTMESGKADFGGFYATWEGVQADMYGPKLNCFTEPDYGVPGNADAIGIITNDKTIKN NPDLVKKFTQATQKGYEYAYANPDDAAQILVDEAPDANLKPEFVKKSMQVIVDGQYWGDPAKIKDGSFVLGTNDFKGTQE YFDFLAEEDAYTDSHDKVIHEAPQAKDLATDEFLGK
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319957, Length=261, Percent_Identity=24.1379310344828, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6321050, Length=261, Percent_Identity=24.1379310344828, Blast_Score=73, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38273; Mature: 38273
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLVSKAAALVGALAMTFGFAACGQTNTADSSNSNTSDLKKVTFMLSWAPDTNHIGVY CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEEEEEECCCCCCEEEE VAKNKGYFKDAGLDVDIVAVAQAGAEQAVNNGVADFALSNLTNVGIYTLKGAHIKQVLQV EECCCCCEECCCCCEEEEEEHHHCHHHHHHCCHHHHHHHHHCCCCEEEECCHHHHHHHHH QQKPSAIWCALASNAAIKSPKDFDGKTFATFGSNESDAVVRRMIQTDGGKGEFDKVTVGT HCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECC STFQTMESGKADFGGFYATWEGVQADMYGPKLNCFTEPDYGVPGNADAIGIITNDKTIKN HHHHHHHCCCCCCCCEEEEECCCEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCC NPDLVKKFTQATQKGYEYAYANPDDAAQILVDEAPDANLKPEFVKKSMQVIVDGQYWGDP CHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHEEEECCCCCCCC AKIKDGSFVLGTNDFKGTQEYFDFLAEEDAYTDSHDKVIHEAPQAKDLATDEFLGK CEECCCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHCC >Mature Secondary Structure MKKSLVSKAAALVGALAMTFGFAACGQTNTADSSNSNTSDLKKVTFMLSWAPDTNHIGVY CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEEEEEECCCCCCEEEE VAKNKGYFKDAGLDVDIVAVAQAGAEQAVNNGVADFALSNLTNVGIYTLKGAHIKQVLQV EECCCCCEECCCCCEEEEEEHHHCHHHHHHCCHHHHHHHHHCCCCEEEECCHHHHHHHHH QQKPSAIWCALASNAAIKSPKDFDGKTFATFGSNESDAVVRRMIQTDGGKGEFDKVTVGT HCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECC STFQTMESGKADFGGFYATWEGVQADMYGPKLNCFTEPDYGVPGNADAIGIITNDKTIKN HHHHHHHCCCCCCCCEEEEECCCEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCC NPDLVKKFTQATQKGYEYAYANPDDAAQILVDEAPDANLKPEFVKKSMQVIVDGQYWGDP CHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHEEEECCCCCCCC AKIKDGSFVLGTNDFKGTQEYFDFLAEEDAYTDSHDKVIHEAPQAKDLATDEFLGK CEECCCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA