| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is tauC [H]
Identifier: 213691681
GI number: 213691681
Start: 911505
End: 912287
Strand: Reverse
Name: tauC [H]
Synonym: Blon_0786
Alternate gene names: 213691681
Gene position: 912287-911505 (Counterclockwise)
Preceding gene: 213691682
Following gene: 213691680
Centisome position: 32.21
GC content: 60.03
Gene sequence:
>783_bases ATGTCCATCGCCAAGCGCCTCAAGCGCCGCATGCCCACCGTCATCGCCGTCATCATATTGCTGGCAGTCTGGGAAACGTG GGTGGATCTAGGGCATGTCTCCCCCACGATGATCTCCGCGCCAAGCGAGATTTTCGCCGCCACCATCGAAACATGGAACA CGCTCGGCCCGGCCGCGGCAATCACCGGCTATGAGGGCGTGGTCGGCTTCCTGTTCGCCGTGTTCTTCGGCATTATGATC GGCATTGCACTGTACTGCTCTCACACGTTCAACGCGGCGTTCTATCCGCTGCTTGCCGCCGCACAAACCATGCCGCTGAT TTCCATCGCCCCGTTGTTCCTGATTTGGTTCGGTTTTGAGATTTCCGGCAAAATCGTAATCGTGGCGGTATTCGGCCTCT TCCCCATCGCCGTGCAGACAGTGCGCGGACTGGAAGCAGTGCCCCAGTTCTATTCCGACGTCGCATTGACCTGCGGCGCG ACCCCGGTCTGGACGCTCTGGCACGTGAAGCTGCGCGTTGCCGCACGTCAGATCTATGGCGGTATCCGAGTATCTGCCGC ATACATCTTCGCCACGGCATCCACCGCTGAATATCTTGGCGCACGCAAGGGCCTCGGCATCTGGCTGCAGGCTGCCTACA ATTCGTTCCGCACGCCGCTGATCTTCTCCGCCACCATCGTCATTATCCTGATGACATGCGTACTGATGCTGGTGGTAAAC GCCAGCGAACGCATCCTGCTCGGCCCGGCCGGCGATGACGAAGATCCCGACGCGGACCAGTAG
Upstream 100 bases:
>100_bases ATGGCCGGCAGGCGCGCAGGCTCCTCACCTTACTGTTCCACGCCCCGGCCGCAAGCGCCACCAGCAAACCGGACTGGCGC GGAAAGCAAGGTGACATCCC
Downstream 100 bases:
>100_bases TTCTTTTTACCGTCAAAGGCACGAGCCGGCGGCCAGGACCGACTGAACGCGGCGGCTTCTCATGAGGTCTCCAACCCTGT CTCTATAATGGAACAGCTTT
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSIAKRLKRRMPTVIAVIILLAVWETWVDLGHVSPTMISAPSEIFAATIETWNTLGPAAAITGYEGVVGFLFAVFFGIMI GIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGKIVIVAVFGLFPIAVQTVRGLEAVPQFYSDVALTCGA TPVWTLWHVKLRVAARQIYGGIRVSAAYIFATASTAEYLGARKGLGIWLQAAYNSFRTPLIFSATIVIILMTCVLMLVVN ASERILLGPAGDDEDPDADQ
Sequences:
>Translated_260_residues MSIAKRLKRRMPTVIAVIILLAVWETWVDLGHVSPTMISAPSEIFAATIETWNTLGPAAAITGYEGVVGFLFAVFFGIMI GIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGKIVIVAVFGLFPIAVQTVRGLEAVPQFYSDVALTCGA TPVWTLWHVKLRVAARQIYGGIRVSAAYIFATASTAEYLGARKGLGIWLQAAYNSFRTPLIFSATIVIILMTCVLMLVVN ASERILLGPAGDDEDPDADQ >Mature_259_residues SIAKRLKRRMPTVIAVIILLAVWETWVDLGHVSPTMISAPSEIFAATIETWNTLGPAAAITGYEGVVGFLFAVFFGIMIG IALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFEISGKIVIVAVFGLFPIAVQTVRGLEAVPQFYSDVALTCGAT PVWTLWHVKLRVAARQIYGGIRVSAAYIFATASTAEYLGARKGLGIWLQAAYNSFRTPLIFSATIVIILMTCVLMLVVNA SERILLGPAGDDEDPDADQ
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=261, Percent_Identity=27.5862068965517, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87081802, Length=251, Percent_Identity=25.0996015936255, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28152; Mature: 28020
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAKRLKRRMPTVIAVIILLAVWETWVDLGHVSPTMISAPSEIFAATIETWNTLGPAAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCHHH ITGYEGVVGFLFAVFFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC ISGKIVIVAVFGLFPIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQIYG CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC GIRVSAAYIFATASTAEYLGARKGLGIWLQAAYNSFRTPLIFSATIVIILMTCVLMLVVN CCEEEHHHEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC ASERILLGPAGDDEDPDADQ CCCEEEECCCCCCCCCCCCC >Mature Secondary Structure SIAKRLKRRMPTVIAVIILLAVWETWVDLGHVSPTMISAPSEIFAATIETWNTLGPAAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCHHH ITGYEGVVGFLFAVFFGIMIGIALYCSHTFNAAFYPLLAAAQTMPLISIAPLFLIWFGFE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC ISGKIVIVAVFGLFPIAVQTVRGLEAVPQFYSDVALTCGATPVWTLWHVKLRVAARQIYG CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC GIRVSAAYIFATASTAEYLGARKGLGIWLQAAYNSFRTPLIFSATIVIILMTCVLMLVVN CCEEEHHHEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC ASERILLGPAGDDEDPDADQ CCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]