| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691673
Identifier: 213691673
GI number: 213691673
Start: 901079
End: 902782
Strand: Direct
Name: 213691673
Synonym: Blon_0778
Alternate gene names: NA
Gene position: 901079-902782 (Clockwise)
Preceding gene: 213691672
Following gene: 213691674
Centisome position: 31.81
GC content: 60.8
Gene sequence:
>1704_bases ATGGCGCAGGAACTTCGTGAAGGGGACGGCAAGTCGGGCATCGCACGTGCGGGCAAGCGCAAGTGGGGGTATGACCCCGC TCAGGTGGACGCTTTCCTGGAGCGCGCCCATGCTCTGTATGACAGCGAGGGCATGAATCTCACCCAGCATGACATTCAGA ACGTGTCCTTTGATCTGCGCAAGAACGGCTATGTGATCGCACAGGTTGACGCCGCGCTTGGACGTCTGGAACGTGCCGTG GTCGATAAGCAGACCACATGGGAGATAGCACAGCATGGGCGTGTGACGTGGAAGGCGAAGACCGAGAAGCTGTATCACGA AGTCCAGAACCATGCGGAGCGTAACGAGCGCGAACGCTTCAAGTCCGGAGCGCCCAAGCAGCCTTCGTATGATAAGAAGC AGGTGGATCGTCTGGTCGACCAGATTGTGGACAAGGCGGCGGCCGCATTGGGCGTTGACGGCGTGACCGAAGACGATGTA CGGTCTTTGGCCGATCTCAATGCGGATACGGTCAACAATGTGATCTTCACCCAGCGCAAGGGCAAGAGAGGCTATGACGA GCGACAGGTCGATTACTTCCTGAATGCCTGCGTGCAGTTGCTGAGTCGCTTGGAATCCTATGCCCGTGTGGCCGATTTCG TGTCCGGCGAGCCCGCGGCTCCTGCCCAGACCGCCACGAACGTGACCGTTCAAGCGAACGGCGTCTCGCCATTGTTCGCT TCCGGAACGCAGCGCCCGGCAACTGACGAACGTTTTGCGCCGTCTGCCGTTGCTCATGACGAATCATTCGATGCCCTGCA TCAGGCCGAGCAGAGCTTGTTCACTGCTCCGGCTCCGGTTGCTCCCGCAGCGCCGGCCGCGGCGGCACCGATCGCCTATG CGCCGGCTCCTGCATCGTTCGATGCTTCCACAAGCACCAATAGCACCAATGCGGAACAGCCGGTTTCCTTTGCTCCCGCA GCATACCCGGTGCATGCGTCCAACGAGTCTGCGGCGAAGCCCGTCTCCGAGACGCCTTCCGTGGCTCCTACCGCAGCTGT TGCGGCTGAGCCTCCCGTCAGTGCCCCGTCCGCGCCGGTTTCCGGTGCGACCGCTGGCAACGCCCCCTCGTTTGCTCCGG CACAGTCGTCACACGAATCCGCAGCTCCGTCATCGACCCCGTCGGTGTTCGCGGAACAGCCCGTGGATATGGTGCAGAAC GATTCCTCTCTGGCCGCTCTCGCCCACATGGCTGCGGTTTCTCAGGAACTTCCGGCGGTGGATGTACCGTCCTTCGCTCC CAAGATGCCCAGCCTTGATACACCGAATGCGCTGAAATTGAATGAGGTACCGGGTTCGGTTTCATCCCCGGCACCTTCCG CCCCGGCAGCGCAGCCTGTGAATAGCACTGCCGACGAGGCTGCGTCCGCTGCCATGCCGGTCTCCTTTGCTCCCACCAGC AAGCCGGATCGTAACACGAACTCCATTCCGGTTCGCGTATCCGATAGTCAGCCTGCAGACAGCACGACCTCCCGTCCGGC TGCGGAATCATCTGAATACGTTGCCGCCTCCCACGACACGGAAGCGGCTCAGCCGTCACAGGATAAGCACGATTCCAACG ATTCGTTCCCGCTGCTGTTCCCGCTTGTCGGTAACTTCGATTCGGATATCCCCGACCTGTCGTTCCCCACACTGAACAAT GACGATACGAAGAAGGAACAGTGA
Upstream 100 bases:
>100_bases CTACAGAATCGTGAATTTCGGTCTTCTTGGTCAGATGCGTCTCAATAGTCACGTAAAGTTGTGGCAGAGTGTTTATATCC AGCAGGAGGTCGAATAGCCG
Downstream 100 bases:
>100_bases GCATAGCCTCCAACTCCACCGTCATCATTCTCGGATCCACTGGATCCATCGGCACCCAAGGACTTGACGTCATCGCGCGT CACCCTGAACGATTTACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Pyridoxine Biosynthesis
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MAQELREGDGKSGIARAGKRKWGYDPAQVDAFLERAHALYDSEGMNLTQHDIQNVSFDLRKNGYVIAQVDAALGRLERAV VDKQTTWEIAQHGRVTWKAKTEKLYHEVQNHAERNERERFKSGAPKQPSYDKKQVDRLVDQIVDKAAAALGVDGVTEDDV RSLADLNADTVNNVIFTQRKGKRGYDERQVDYFLNACVQLLSRLESYARVADFVSGEPAAPAQTATNVTVQANGVSPLFA SGTQRPATDERFAPSAVAHDESFDALHQAEQSLFTAPAPVAPAAPAAAAPIAYAPAPASFDASTSTNSTNAEQPVSFAPA AYPVHASNESAAKPVSETPSVAPTAAVAAEPPVSAPSAPVSGATAGNAPSFAPAQSSHESAAPSSTPSVFAEQPVDMVQN DSSLAALAHMAAVSQELPAVDVPSFAPKMPSLDTPNALKLNEVPGSVSSPAPSAPAAQPVNSTADEAASAAMPVSFAPTS KPDRNTNSIPVRVSDSQPADSTTSRPAAESSEYVAASHDTEAAQPSQDKHDSNDSFPLLFPLVGNFDSDIPDLSFPTLNN DDTKKEQ
Sequences:
>Translated_567_residues MAQELREGDGKSGIARAGKRKWGYDPAQVDAFLERAHALYDSEGMNLTQHDIQNVSFDLRKNGYVIAQVDAALGRLERAV VDKQTTWEIAQHGRVTWKAKTEKLYHEVQNHAERNERERFKSGAPKQPSYDKKQVDRLVDQIVDKAAAALGVDGVTEDDV RSLADLNADTVNNVIFTQRKGKRGYDERQVDYFLNACVQLLSRLESYARVADFVSGEPAAPAQTATNVTVQANGVSPLFA SGTQRPATDERFAPSAVAHDESFDALHQAEQSLFTAPAPVAPAAPAAAAPIAYAPAPASFDASTSTNSTNAEQPVSFAPA AYPVHASNESAAKPVSETPSVAPTAAVAAEPPVSAPSAPVSGATAGNAPSFAPAQSSHESAAPSSTPSVFAEQPVDMVQN DSSLAALAHMAAVSQELPAVDVPSFAPKMPSLDTPNALKLNEVPGSVSSPAPSAPAAQPVNSTADEAASAAMPVSFAPTS KPDRNTNSIPVRVSDSQPADSTTSRPAAESSEYVAASHDTEAAQPSQDKHDSNDSFPLLFPLVGNFDSDIPDLSFPTLNN DDTKKEQ >Mature_566_residues AQELREGDGKSGIARAGKRKWGYDPAQVDAFLERAHALYDSEGMNLTQHDIQNVSFDLRKNGYVIAQVDAALGRLERAVV DKQTTWEIAQHGRVTWKAKTEKLYHEVQNHAERNERERFKSGAPKQPSYDKKQVDRLVDQIVDKAAAALGVDGVTEDDVR SLADLNADTVNNVIFTQRKGKRGYDERQVDYFLNACVQLLSRLESYARVADFVSGEPAAPAQTATNVTVQANGVSPLFAS GTQRPATDERFAPSAVAHDESFDALHQAEQSLFTAPAPVAPAAPAAAAPIAYAPAPASFDASTSTNSTNAEQPVSFAPAA YPVHASNESAAKPVSETPSVAPTAAVAAEPPVSAPSAPVSGATAGNAPSFAPAQSSHESAAPSSTPSVFAEQPVDMVQND SSLAALAHMAAVSQELPAVDVPSFAPKMPSLDTPNALKLNEVPGSVSSPAPSAPAAQPVNSTADEAASAAMPVSFAPTSK PDRNTNSIPVRVSDSQPADSTTSRPAAESSEYVAASHDTEAAQPSQDKHDSNDSFPLLFPLVGNFDSDIPDLSFPTLNND DTKKEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59743; Mature: 59611
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQELREGDGKSGIARAGKRKWGYDPAQVDAFLERAHALYDSEGMNLTQHDIQNVSFDLR CCCCHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEC KNGYVIAQVDAALGRLERAVVDKQTTWEIAQHGRVTWKAKTEKLYHEVQNHAERNERERF CCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH KSGAPKQPSYDKKQVDRLVDQIVDKAAAALGVDGVTEDDVRSLADLNADTVNNVIFTQRK HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHCEEEECCC GKRGYDERQVDYFLNACVQLLSRLESYARVADFVSGEPAAPAQTATNVTVQANGVSPLFA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHH SGTQRPATDERFAPSAVAHDESFDALHQAEQSLFTAPAPVAPAAPAAAAPIAYAPAPASF CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCC DASTSTNSTNAEQPVSFAPAAYPVHASNESAAKPVSETPSVAPTAAVAAEPPVSAPSAPV CCCCCCCCCCCCCCCCCCCCCCEEECCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCC SGATAGNAPSFAPAQSSHESAAPSSTPSVFAEQPVDMVQNDSSLAALAHMAAVSQELPAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCC DVPSFAPKMPSLDTPNALKLNEVPGSVSSPAPSAPAAQPVNSTADEAASAAMPVSFAPTS CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEECCCC KPDRNTNSIPVRVSDSQPADSTTSRPAAESSEYVAASHDTEAAQPSQDKHDSNDSFPLLF CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEE PLVGNFDSDIPDLSFPTLNNDDTKKEQ EECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQELREGDGKSGIARAGKRKWGYDPAQVDAFLERAHALYDSEGMNLTQHDIQNVSFDLR CCCHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEC KNGYVIAQVDAALGRLERAVVDKQTTWEIAQHGRVTWKAKTEKLYHEVQNHAERNERERF CCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH KSGAPKQPSYDKKQVDRLVDQIVDKAAAALGVDGVTEDDVRSLADLNADTVNNVIFTQRK HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHCEEEECCC GKRGYDERQVDYFLNACVQLLSRLESYARVADFVSGEPAAPAQTATNVTVQANGVSPLFA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHH SGTQRPATDERFAPSAVAHDESFDALHQAEQSLFTAPAPVAPAAPAAAAPIAYAPAPASF CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCC DASTSTNSTNAEQPVSFAPAAYPVHASNESAAKPVSETPSVAPTAAVAAEPPVSAPSAPV CCCCCCCCCCCCCCCCCCCCCCEEECCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCC SGATAGNAPSFAPAQSSHESAAPSSTPSVFAEQPVDMVQNDSSLAALAHMAAVSQELPAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCC DVPSFAPKMPSLDTPNALKLNEVPGSVSSPAPSAPAAQPVNSTADEAASAAMPVSFAPTS CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEECCCC KPDRNTNSIPVRVSDSQPADSTTSRPAAESSEYVAASHDTEAAQPSQDKHDSNDSFPLLF CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEE PLVGNFDSDIPDLSFPTLNNDDTKKEQ EECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA