| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691672
Identifier: 213691672
GI number: 213691672
Start: 900185
End: 900610
Strand: Direct
Name: 213691672
Synonym: Blon_0777
Alternate gene names: NA
Gene position: 900185-900610 (Clockwise)
Preceding gene: 213691671
Following gene: 213691673
Centisome position: 31.78
GC content: 63.15
Gene sequence:
>426_bases GTGTCCCCTGTGAATCAAACGGCATCACAGAACGCTGAAGAATTTGGTTTCGAGCCCGGCGATATCGTCCAGGAGTGGCT CTGGGACGACGATGTGGACGATTCCATTCGTGCCCAGATTGAAGAGCTCACGGGCGAGGATCTCGTGGACGAGGACTACG ACTCCGCTGTGGACGGCGTCATCGTATGGTGGCGCGACGGCGATGATGAGGACGAATTGTCCGATACGATCGTTGACGCC TACGCGGTACTGGGCAATGACGGCCCGCTGTGGATACTGACTCCCAAGCCCGGCCGCCCGGGTGCCGCCAGCTCCTCCAC CGTGCAGTCCGCCGCACAGACCGCCGGTATGAACGCCGCCACCCCGCTGACCGTCAGCTCGGACTGGAACGGCATCCGCC TGCGCGCATTCGGCAAGGGCCGCTGA
Upstream 100 bases:
>100_bases CGGCCAGTCGTTGTTTCTGGTGAGACGACTCGCATGGGTCTGCCCACAATGCGGCGATTTTCGGCCGCGTTAACGCATTT GTTCGCGAAGACTTGCTAAT
Downstream 100 bases:
>100_bases TAAGCCTCAATCAATACGCTTGACTTTAAGCGTGTTGACCGGCGTCGCGTGCTGCGTAGTGCTGCTGGGCGTGGCTGAAT GTCATTGCGATTGAGCGCTA
Product: narrowly conserved hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSPVNQTASQNAEEFGFEPGDIVQEWLWDDDVDDSIRAQIEELTGEDLVDEDYDSAVDGVIVWWRDGDDEDELSDTIVDA YAVLGNDGPLWILTPKPGRPGAASSSTVQSAAQTAGMNAATPLTVSSDWNGIRLRAFGKGR
Sequences:
>Translated_141_residues MSPVNQTASQNAEEFGFEPGDIVQEWLWDDDVDDSIRAQIEELTGEDLVDEDYDSAVDGVIVWWRDGDDEDELSDTIVDA YAVLGNDGPLWILTPKPGRPGAASSSTVQSAAQTAGMNAATPLTVSSDWNGIRLRAFGKGR >Mature_140_residues SPVNQTASQNAEEFGFEPGDIVQEWLWDDDVDDSIRAQIEELTGEDLVDEDYDSAVDGVIVWWRDGDDEDELSDTIVDAY AVLGNDGPLWILTPKPGRPGAASSSTVQSAAQTAGMNAATPLTVSSDWNGIRLRAFGKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021412 [H]
Pfam domain/function: PF11253 DUF3052 [H]
EC number: NA
Molecular weight: Translated: 15261; Mature: 15129
Theoretical pI: Translated: 3.58; Mature: 3.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPVNQTASQNAEEFGFEPGDIVQEWLWDDDVDDSIRAQIEELTGEDLVDEDYDSAVDGV CCCCCCHHHCCHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCE IVWWRDGDDEDELSDTIVDAYAVLGNDGPLWILTPKPGRPGAASSSTVQSAAQTAGMNAA EEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCC TPLTVSSDWNGIRLRAFGKGR CCEEECCCCCCEEEEEECCCC >Mature Secondary Structure SPVNQTASQNAEEFGFEPGDIVQEWLWDDDVDDSIRAQIEELTGEDLVDEDYDSAVDGV CCCCCHHHCCHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCE IVWWRDGDDEDELSDTIVDAYAVLGNDGPLWILTPKPGRPGAASSSTVQSAAQTAGMNAA EEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCC TPLTVSSDWNGIRLRAFGKGR CCEEECCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]