| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is mtrB [H]
Identifier: 213691594
GI number: 213691594
Start: 799906
End: 801897
Strand: Direct
Name: mtrB [H]
Synonym: Blon_0698
Alternate gene names: 213691594
Gene position: 799906-801897 (Clockwise)
Preceding gene: 213691593
Following gene: 213691595
Centisome position: 28.24
GC content: 60.24
Gene sequence:
>1992_bases ATGAGTATCCCCGATAAGCAGTCAGGCGGCGTACCGCCGAGCAGCACGCCGAACGCCGCCCCGAACACGAATCCCATGCC TGCAATGCCGCCGTTCGCCGCCCATTTCCAAGAGCGGAACGAACGTAAGAAAAACATGCTGATGCGGCATATCGACCGTA TCTCGTTGAGCAGCAAGCTGGTGGCCTGCACCATCGCCGTGCTGCTCATCGGCGTGTCGGTGATTTCCTTCTCCATCCGC GCGTTGGTGAACAACTACATGCTGCAGAAAACCGACACCCAGTTAAGCTCGCAAAGCCAGCTGGTGGTCAACAATATCGA TCTGCTGTCAAGAAATGACTCATCGGGGCCGAACTCGTACTTTCTGCAGATTCAATATACCGACGGCACCAAAGACAAAG AGGGCAATCCTCTGGTCGTGACCCCGCTGATGCCGCAGATGCAGGACGGTATCGTATCGGTGCCGATTCTTCCTACCTAT GGTGATACCAGTGGCATCACGCTCGGCCAGGCATTCACTACGCAGGCAGTGGCCAAGCAGATCATCACGGTGCAGTCCGA CAGTGCGGACAGCCAGAACGATCCGGCCAACGGAAACTCCAATTCCTCTGACACCATCACCAAGGTACTGGCCAACCCCA CTGTCAATGCCAACCATGCCGCCATCGTCACGGCGAGGGCGCCATGGCGTATTCTGCCGGTGACCTTCCAGCAAAACGGC AAGGACCGGGCCGTGGTGTACATCGGCTTGTCACTGGCCGACCAGATCGACACCGTCAACACACTCACCCGATACTGCAT TGTGGTCGGCATCGCCGTGGTGCTGCTCGGCGGCTCCCTGTCCACGCTGATCATCCAGCACACGATGACGCCGCTGAAGC GCATCGAGAAAACCGCTGCAAAGATTGCCGCCGGCGACCTGAGCCAGCGTATTCCTTCCGCGCCGGAAAACACCGAGGTC GGCTCCCTGGCCGCCTCGCTGAACTCCATGCTCGCCCGAATAGAATCCAGTTTCCATGAGCAGGAGGAGACCACCGACAA GATGAAACGGTTCGTCTCCGACGCCAGCCATGAGCTGCGCACCCCGTTGGCCGCCATCCATGGCTATGCGGAGCTGTATA AGATGCAGCGCGATATGCCTGGTGCCTTGGAGCGTGCGGACGAGTCCATCGAACATATCGAACGGTCCAGCCAGCGCATG ACGGTTCTTGTTGAGGATCTGCTGTCTTTGGCCCGTCTCGATGAGGGGCGCGGCATCGATGTGACCGGCACGGTGAAACT CTCGTCGCTGGTCACCGACGCCGTCGATGACTTGCATGCGCTCGACCCGGACCGTGCCGTTCGCCGCATGCAGATTTCCC TCGAACCGGCGCGCGATTTGAACCATCCCGCCGAATTCAACCTTGCCGAAGGCGATTGGCCCGAGGTTGTACTGCCCGGC GACGCCTCTCGACTGCGCCAGGTGGTGACCAACATCGTGGGCAACATCCACCGCTACACGCCTGCCGATTCGCCTGCCGA GGCCGCGCTCGGTGTGATGCCGGCCGCCATCGATCCAAGACAGCTCGCTCGCATGCCCGCCAGCGACGCGTCAATGCGGC GGTTCATCGACGCCGCCGAAGTAGGTGCCTCGATGCAGACCGGCTATCGATATGCCGTATTGCGTTTCGTGGACCATGGC CCCGGCGTGCCGCCTGAATCACGCTCGAAGATTTTCGAACGCTTCTACACCGCGGACCCGTCCCGTGCCCGAGAAAAGGG CGGTACCGGTTTGGGCATGGCCATCGCGCAATCCGTGGTCAAAGCACATCACGGCTTTATCTGCGCCACCGGCACCGATG GGGGAGGCCTGACCTTCACCGTGGTGCTGCCGATTGAGCAGATCGCCGCTCCTGAGCCCAAACAGTCCACCGGAAAAACC AAGGACGCCAAACAGAAGACTTCTTGGTTCAGCTCTGAGCGTAAGACTCAGGCGACTCAGCCCAAAGCGTGA
Upstream 100 bases:
>100_bases AGCGCAAGGTTACCCCGCTGATTGAAACCAAGCGCGGCATCGGATATATGATTCGCGAACCGAAGAACTAGTCGCCCCAT CCATAACGCATCGTAATCTC
Downstream 100 bases:
>100_bases GGTCAAGCCCTGTGAGGTAAACTGTACCTTCGGTTTACTATTTCCATTGAGGATTAAGGAAGGTTCGCAATGCCCACCGG TCGAGTTCGTTGGTTTGACG
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 663; Mature: 662
Protein sequence:
>663_residues MSIPDKQSGGVPPSSTPNAAPNTNPMPAMPPFAAHFQERNERKKNMLMRHIDRISLSSKLVACTIAVLLIGVSVISFSIR ALVNNYMLQKTDTQLSSQSQLVVNNIDLLSRNDSSGPNSYFLQIQYTDGTKDKEGNPLVVTPLMPQMQDGIVSVPILPTY GDTSGITLGQAFTTQAVAKQIITVQSDSADSQNDPANGNSNSSDTITKVLANPTVNANHAAIVTARAPWRILPVTFQQNG KDRAVVYIGLSLADQIDTVNTLTRYCIVVGIAVVLLGGSLSTLIIQHTMTPLKRIEKTAAKIAAGDLSQRIPSAPENTEV GSLAASLNSMLARIESSFHEQEETTDKMKRFVSDASHELRTPLAAIHGYAELYKMQRDMPGALERADESIEHIERSSQRM TVLVEDLLSLARLDEGRGIDVTGTVKLSSLVTDAVDDLHALDPDRAVRRMQISLEPARDLNHPAEFNLAEGDWPEVVLPG DASRLRQVVTNIVGNIHRYTPADSPAEAALGVMPAAIDPRQLARMPASDASMRRFIDAAEVGASMQTGYRYAVLRFVDHG PGVPPESRSKIFERFYTADPSRAREKGGTGLGMAIAQSVVKAHHGFICATGTDGGGLTFTVVLPIEQIAAPEPKQSTGKT KDAKQKTSWFSSERKTQATQPKA
Sequences:
>Translated_663_residues MSIPDKQSGGVPPSSTPNAAPNTNPMPAMPPFAAHFQERNERKKNMLMRHIDRISLSSKLVACTIAVLLIGVSVISFSIR ALVNNYMLQKTDTQLSSQSQLVVNNIDLLSRNDSSGPNSYFLQIQYTDGTKDKEGNPLVVTPLMPQMQDGIVSVPILPTY GDTSGITLGQAFTTQAVAKQIITVQSDSADSQNDPANGNSNSSDTITKVLANPTVNANHAAIVTARAPWRILPVTFQQNG KDRAVVYIGLSLADQIDTVNTLTRYCIVVGIAVVLLGGSLSTLIIQHTMTPLKRIEKTAAKIAAGDLSQRIPSAPENTEV GSLAASLNSMLARIESSFHEQEETTDKMKRFVSDASHELRTPLAAIHGYAELYKMQRDMPGALERADESIEHIERSSQRM TVLVEDLLSLARLDEGRGIDVTGTVKLSSLVTDAVDDLHALDPDRAVRRMQISLEPARDLNHPAEFNLAEGDWPEVVLPG DASRLRQVVTNIVGNIHRYTPADSPAEAALGVMPAAIDPRQLARMPASDASMRRFIDAAEVGASMQTGYRYAVLRFVDHG PGVPPESRSKIFERFYTADPSRAREKGGTGLGMAIAQSVVKAHHGFICATGTDGGGLTFTVVLPIEQIAAPEPKQSTGKT KDAKQKTSWFSSERKTQATQPKA >Mature_662_residues SIPDKQSGGVPPSSTPNAAPNTNPMPAMPPFAAHFQERNERKKNMLMRHIDRISLSSKLVACTIAVLLIGVSVISFSIRA LVNNYMLQKTDTQLSSQSQLVVNNIDLLSRNDSSGPNSYFLQIQYTDGTKDKEGNPLVVTPLMPQMQDGIVSVPILPTYG DTSGITLGQAFTTQAVAKQIITVQSDSADSQNDPANGNSNSSDTITKVLANPTVNANHAAIVTARAPWRILPVTFQQNGK DRAVVYIGLSLADQIDTVNTLTRYCIVVGIAVVLLGGSLSTLIIQHTMTPLKRIEKTAAKIAAGDLSQRIPSAPENTEVG SLAASLNSMLARIESSFHEQEETTDKMKRFVSDASHELRTPLAAIHGYAELYKMQRDMPGALERADESIEHIERSSQRMT VLVEDLLSLARLDEGRGIDVTGTVKLSSLVTDAVDDLHALDPDRAVRRMQISLEPARDLNHPAEFNLAEGDWPEVVLPGD ASRLRQVVTNIVGNIHRYTPADSPAEAALGVMPAAIDPRQLARMPASDASMRRFIDAAEVGASMQTGYRYAVLRFVDHGP GVPPESRSKIFERFYTADPSRAREKGGTGLGMAIAQSVVKAHHGFICATGTDGGGLTFTVVLPIEQIAAPEPKQSTGKTK DAKQKTSWFSSERKTQATQPKA
Specific function: Member of the two-component regulatory system mtrA/mtrB. Seems to function as a membrane-associated protein kinase that phosphorylates mtrA in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=340, Percent_Identity=29.4117647058824, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI1786783, Length=400, Percent_Identity=26.75, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1790346, Length=394, Percent_Identity=26.6497461928934, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1786600, Length=300, Percent_Identity=26.6666666666667, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1787894, Length=332, Percent_Identity=25.3012048192771, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786912, Length=362, Percent_Identity=26.2430939226519, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1790551, Length=375, Percent_Identity=23.4666666666667, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 71658; Mature: 71527
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPDKQSGGVPPSSTPNAAPNTNPMPAMPPFAAHFQERNERKKNMLMRHIDRISLSSKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VACTIAVLLIGVSVISFSIRALVNNYMLQKTDTQLSSQSQLVVNNIDLLSRNDSSGPNSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHEECCCCCCCCEE FLQIQYTDGTKDKEGNPLVVTPLMPQMQDGIVSVPILPTYGDTSGITLGQAFTTQAVAKQ EEEEEECCCCCCCCCCCEEEECCCCHHHCCEEEEEEECCCCCCCCEEECHHHHHHHHHHH IITVQSDSADSQNDPANGNSNSSDTITKVLANPTVNANHAAIVTARAPWRILPVTFQQNG HHEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCC KDRAVVYIGLSLADQIDTVNTLTRYCIVVGIAVVLLGGSLSTLIIQHTMTPLKRIEKTAA CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KIAAGDLSQRIPSAPENTEVGSLAASLNSMLARIESSFHEQEETTDKMKRFVSDASHELR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TPLAAIHGYAELYKMQRDMPGALERADESIEHIERSSQRMTVLVEDLLSLARLDEGRGID HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VTGTVKLSSLVTDAVDDLHALDPDRAVRRMQISLEPARDLNHPAEFNLAEGDWPEVVLPG EEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHCCCCCCCCCCCCCCCCCEEECC DASRLRQVVTNIVGNIHRYTPADSPAEAALGVMPAAIDPRQLARMPASDASMRRFIDAAE CHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHH VGASMQTGYRYAVLRFVDHGPGVPPESRSKIFERFYTADPSRAREKGGTGLGMAIAQSVV HCCHHHCCHHEEEHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHH KAHHGFICATGTDGGGLTFTVVLPIEQIAAPEPKQSTGKTKDAKQKTSWFSSERKTQATQ HHHCCEEEEECCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC PKA CCC >Mature Secondary Structure SIPDKQSGGVPPSSTPNAAPNTNPMPAMPPFAAHFQERNERKKNMLMRHIDRISLSSKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VACTIAVLLIGVSVISFSIRALVNNYMLQKTDTQLSSQSQLVVNNIDLLSRNDSSGPNSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHEECCCCCCCCEE FLQIQYTDGTKDKEGNPLVVTPLMPQMQDGIVSVPILPTYGDTSGITLGQAFTTQAVAKQ EEEEEECCCCCCCCCCCEEEECCCCHHHCCEEEEEEECCCCCCCCEEECHHHHHHHHHHH IITVQSDSADSQNDPANGNSNSSDTITKVLANPTVNANHAAIVTARAPWRILPVTFQQNG HHEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCC KDRAVVYIGLSLADQIDTVNTLTRYCIVVGIAVVLLGGSLSTLIIQHTMTPLKRIEKTAA CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KIAAGDLSQRIPSAPENTEVGSLAASLNSMLARIESSFHEQEETTDKMKRFVSDASHELR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TPLAAIHGYAELYKMQRDMPGALERADESIEHIERSSQRMTVLVEDLLSLARLDEGRGID HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VTGTVKLSSLVTDAVDDLHALDPDRAVRRMQISLEPARDLNHPAEFNLAEGDWPEVVLPG EEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHCCCCCCCCCCCCCCCCCEEECC DASRLRQVVTNIVGNIHRYTPADSPAEAALGVMPAAIDPRQLARMPASDASMRRFIDAAE CHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHH VGASMQTGYRYAVLRFVDHGPGVPPESRSKIFERFYTADPSRAREKGGTGLGMAIAQSVV HCCHHHCCHHEEEHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHH KAHHGFICATGTDGGGLTFTVVLPIEQIAAPEPKQSTGKTKDAKQKTSWFSSERKTQATQ HHHCCEEEEECCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC PKA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA