| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691592
Identifier: 213691592
GI number: 213691592
Start: 798346
End: 799152
Strand: Direct
Name: 213691592
Synonym: Blon_0696
Alternate gene names: NA
Gene position: 798346-799152 (Clockwise)
Preceding gene: 213691590
Following gene: 213691593
Centisome position: 28.18
GC content: 53.66
Gene sequence:
>807_bases ATGTCAACAACGAATCGGGCAGACGGAAAAACAACTATTGTGGTCCTAGCTTCGGAGCCGTCCTGTTCGGCCTGCGGGAA TATGGTCCGAAAATGGCTTGTTTGCGCCATTTGCGCCCTTGCTGCAGTAGCGATGAACGCAATGTGGATAACCGCAAATG CCTATGGGGATAACTCGGGCGACAGCTCTGACAGCTCCAGCAGCAGCACCGACAGCGGCGTGACCATCACCGAGAACATC ACGGATACGGAAAATCTCCTGGGCTCCCATGCGGCCAAAGTCACGGATGCCATCGCCAAAACCGAGAAGGAAACCGGTGT ACACGTGCATCTGCTGTATCTTTCCAGTTTCAATAGTCAACAGAAACCGGAAGACTGGGCGGCAACCGTGATGGAGTCCA TGAATCCCAAGCCGAACACAGTGATGCTTGCCGTGGCCTCGAATGACGGCAACCTGGTGGTCGTCGTGTCCAAGAACTCC GATAAGTGGCTTCTCGATAACAAAACCGTCGATAAGCTATCCGAAGCCGCACAGCAGCCGTTACTGGAAAACCCACCGAG CTGGTCTGGCGCGGCAACGGCAATGATGGATCAAATCGTGAAATCCAAAAAAGCCTCCACCTCATCGTCCACGGTGACCG TAGGCATAATCATCATGGGTGTGGTGTTGGTGGCGCTGGTCATCATCATCGTGGTCATGGTGGTGATTCGTCGGCGCAAG GAGATCAAGAAGGATTCCAAGGCCGAACTCCAAGATGACATTCAGGAAACGCCCAGAAGAGCACGACACTCTAGAAGGCA TGAGTAA
Upstream 100 bases:
>100_bases TCGGAATCTACCTGATATTGGGGCATCGTTGCTCCTTTTCTAGAGGGTTAATGGTATGTATGGCGGCCGCTTGCCAATAC CGGCCGCTAAGGTGGAGGAT
Downstream 100 bases:
>100_bases GCCTATTGAAGCATCGATTGTTGTTGTCGACGACGAGCCGTCCATCCGAGAACTGCTGGTCGCTTCCCTGCACTTCGCCG GATTCGAGGTAAACACCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSTTNRADGKTTIVVLASEPSCSACGNMVRKWLVCAICALAAVAMNAMWITANAYGDNSGDSSDSSSSSTDSGVTITENI TDTENLLGSHAAKVTDAIAKTEKETGVHVHLLYLSSFNSQQKPEDWAATVMESMNPKPNTVMLAVASNDGNLVVVVSKNS DKWLLDNKTVDKLSEAAQQPLLENPPSWSGAATAMMDQIVKSKKASTSSSTVTVGIIIMGVVLVALVIIIVVMVVIRRRK EIKKDSKAELQDDIQETPRRARHSRRHE
Sequences:
>Translated_268_residues MSTTNRADGKTTIVVLASEPSCSACGNMVRKWLVCAICALAAVAMNAMWITANAYGDNSGDSSDSSSSSTDSGVTITENI TDTENLLGSHAAKVTDAIAKTEKETGVHVHLLYLSSFNSQQKPEDWAATVMESMNPKPNTVMLAVASNDGNLVVVVSKNS DKWLLDNKTVDKLSEAAQQPLLENPPSWSGAATAMMDQIVKSKKASTSSSTVTVGIIIMGVVLVALVIIIVVMVVIRRRK EIKKDSKAELQDDIQETPRRARHSRRHE >Mature_267_residues STTNRADGKTTIVVLASEPSCSACGNMVRKWLVCAICALAAVAMNAMWITANAYGDNSGDSSDSSSSSTDSGVTITENIT DTENLLGSHAAKVTDAIAKTEKETGVHVHLLYLSSFNSQQKPEDWAATVMESMNPKPNTVMLAVASNDGNLVVVVSKNSD KWLLDNKTVDKLSEAAQQPLLENPPSWSGAATAMMDQIVKSKKASTSSSTVTVGIIIMGVVLVALVIIIVVMVVIRRRKE IKKDSKAELQDDIQETPRRARHSRRHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28802; Mature: 28671
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTNRADGKTTIVVLASEPSCSACGNMVRKWLVCAICALAAVAMNAMWITANAYGDNSG CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC DSSDSSSSSTDSGVTITENITDTENLLGSHAAKVTDAIAKTEKETGVHVHLLYLSSFNSQ CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC QKPEDWAATVMESMNPKPNTVMLAVASNDGNLVVVVSKNSDKWLLDNKTVDKLSEAAQQP CCCHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCHHHHHHHHHHCC LLENPPSWSGAATAMMDQIVKSKKASTSSSTVTVGIIIMGVVLVALVIIIVVMVVIRRRK CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIKKDSKAELQDDIQETPRRARHSRRHE HHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STTNRADGKTTIVVLASEPSCSACGNMVRKWLVCAICALAAVAMNAMWITANAYGDNSG CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC DSSDSSSSSTDSGVTITENITDTENLLGSHAAKVTDAIAKTEKETGVHVHLLYLSSFNSQ CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC QKPEDWAATVMESMNPKPNTVMLAVASNDGNLVVVVSKNSDKWLLDNKTVDKLSEAAQQP CCCHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCHHHHHHHHHHCC LLENPPSWSGAATAMMDQIVKSKKASTSSSTVTVGIIIMGVVLVALVIIIVVMVVIRRRK CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIKKDSKAELQDDIQETPRRARHSRRHE HHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA