| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is gsiB [H]
Identifier: 213691546
GI number: 213691546
Start: 745512
End: 747080
Strand: Direct
Name: gsiB [H]
Synonym: Blon_0647
Alternate gene names: 213691546
Gene position: 745512-747080 (Clockwise)
Preceding gene: 213691544
Following gene: 213691547
Centisome position: 26.32
GC content: 61.25
Gene sequence:
>1569_bases ATGGTCAAGATTAATGCAAGGGTCAGGGCGGCCGTGGCGGCCATCCTGGCCGGCGGCATGGTTGTCGCCATGGCCGGCTG CGGCGGCTCGTCCGCCACGGCCGGCGCCACCGGCACCTCGATTCCAGACACGATCACGACGGAAGTGGCATACGCGAGCC GTGACTTCATGCCGAACACGACGTCCGGAGCGCTGCCGATGTCGGCGAACTGGCATGTCGTCGAACCGCTGTACGCGCTT GACTACACGACTTACAAGACATTCCCGGCGCTCGCCAAAGGCGCGCCTCAGAAGGTCTCCGACACCGAGTACGTGATCAC GCTGCGTGACGGCGCGAAGTTCTCCGATGGCACGCCCGTCAAGGCGTCCGATGTCGTGAGCTCCTACAAGCGCTCGACCG CCGAAGGCAGCCTGTTCATCTCGATGCTCGACTTCATCGACTCCGTCGAGGCGAAGGGCGACAACCAGGTGGACTTCAAG CTCAAGGAAGCCTTCCCGATGTTCGAAAAGCGTCTGGCGCTCATCCCGATCGTCCCGTCCGGCAAGTCGGACGCCGAACT CAAGAAGATGCCCACCGGTTCCGGGCCGTGGAAGTACACGGCGATCACCGACCGGCAGGTGAGCTTCGAGAAGAACGACG CCTACAACGGCAAGTATCCGGCCCAGACAAAGAAGATGGTCTGGAACGTCAACGTCGACGACACCGCGCGAGTCACCGCG ATGCAGGCCGGCAAGACGGACGTCATGGAAAACGTGCCCGCGAAGGCGGTGCAGACGCTGACGTCCTCGGGTTCCGACAT CCAGACGGTGCAGGGCTTCAACCAGGCGTTCATCATGTTCAACACGAAGAAGAAGCCGTTCGACGACCCCCGCGTGCGTC AGGCCGTGTTCTACTCGATCGACACGAAGAAGCTCATCGACAACCAGCTGTCCGGACAGGCGCAGACCGTCACGAGTTTC CTGCCCGAGAACTTCGCGAACTACCATAAGGCGAAGAACGTCTACACGAAGAACACCGCGAAGGCCAAGGAACTGCTGAA GGAAGCAGGCGTCAACGGTCCGATCAAGACCACGCTGTACACGACCGACCAGACCTGGGTCACGCAGCTCGCCCCACAGA TCAAGAACGATCTTGCGGAATCAGGCATCGACGTGGATATCCAGTCGATGAAGTCGTCGGCGTTGTATCCGTCGATCACC GACAAGGACGGCGCTGACTTCTCGATGGTTCTCGCCCCGGGCGATCCCTCGGTCTTCGGCAACGACCCCGACCTGCTGAT GAACTGGTGGTACGGAGACAACGTCTGGACCAAGCAGCGCACGTTCTGGAAGGGGTCGGAAGGCTATGACGAGCTGCACG ACCTGATGGGCAAGGCCCTGTCCGCGTCGAGCGATGCCGAGCGCCAGGACTACTGGAACCAGTGCTTCGATCTGCTTTCC GAGCAGGTGCCGCTTTATCCGCTCTTCCACCGCAAGGTGAGCACGGCCGTCAAGAAGGGTGTCTTCGACGAATACAAGAC GATGGGCACGACGGGTCTCAACCTGGTCCAGGCCAAAGTCGCACAGTGA
Upstream 100 bases:
>100_bases CACGGCGGATTGGCGGTCCGGCCGGCCTGGACGATTGTCGATGTCGACCATCGTCGAGTTGGACGCACGATGACACATTC TCAACGATGAGGAGATCTCA
Downstream 100 bases:
>100_bases GCCACGCAAAGGAGCGATGGCGCAGAACCCTTCCCTGACGATCTGATACCAAGACAGGCCCGTTCATCTCGTTCCCCTTC CCTCCGCGATCCGTGGACGG
Product: extracellular solute-binding protein, family 5
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MVKINARVRAAVAAILAGGMVVAMAGCGGSSATAGATGTSIPDTITTEVAYASRDFMPNTTSGALPMSANWHVVEPLYAL DYTTYKTFPALAKGAPQKVSDTEYVITLRDGAKFSDGTPVKASDVVSSYKRSTAEGSLFISMLDFIDSVEAKGDNQVDFK LKEAFPMFEKRLALIPIVPSGKSDAELKKMPTGSGPWKYTAITDRQVSFEKNDAYNGKYPAQTKKMVWNVNVDDTARVTA MQAGKTDVMENVPAKAVQTLTSSGSDIQTVQGFNQAFIMFNTKKKPFDDPRVRQAVFYSIDTKKLIDNQLSGQAQTVTSF LPENFANYHKAKNVYTKNTAKAKELLKEAGVNGPIKTTLYTTDQTWVTQLAPQIKNDLAESGIDVDIQSMKSSALYPSIT DKDGADFSMVLAPGDPSVFGNDPDLLMNWWYGDNVWTKQRTFWKGSEGYDELHDLMGKALSASSDAERQDYWNQCFDLLS EQVPLYPLFHRKVSTAVKKGVFDEYKTMGTTGLNLVQAKVAQ
Sequences:
>Translated_522_residues MVKINARVRAAVAAILAGGMVVAMAGCGGSSATAGATGTSIPDTITTEVAYASRDFMPNTTSGALPMSANWHVVEPLYAL DYTTYKTFPALAKGAPQKVSDTEYVITLRDGAKFSDGTPVKASDVVSSYKRSTAEGSLFISMLDFIDSVEAKGDNQVDFK LKEAFPMFEKRLALIPIVPSGKSDAELKKMPTGSGPWKYTAITDRQVSFEKNDAYNGKYPAQTKKMVWNVNVDDTARVTA MQAGKTDVMENVPAKAVQTLTSSGSDIQTVQGFNQAFIMFNTKKKPFDDPRVRQAVFYSIDTKKLIDNQLSGQAQTVTSF LPENFANYHKAKNVYTKNTAKAKELLKEAGVNGPIKTTLYTTDQTWVTQLAPQIKNDLAESGIDVDIQSMKSSALYPSIT DKDGADFSMVLAPGDPSVFGNDPDLLMNWWYGDNVWTKQRTFWKGSEGYDELHDLMGKALSASSDAERQDYWNQCFDLLS EQVPLYPLFHRKVSTAVKKGVFDEYKTMGTTGLNLVQAKVAQ >Mature_522_residues MVKINARVRAAVAAILAGGMVVAMAGCGGSSATAGATGTSIPDTITTEVAYASRDFMPNTTSGALPMSANWHVVEPLYAL DYTTYKTFPALAKGAPQKVSDTEYVITLRDGAKFSDGTPVKASDVVSSYKRSTAEGSLFISMLDFIDSVEAKGDNQVDFK LKEAFPMFEKRLALIPIVPSGKSDAELKKMPTGSGPWKYTAITDRQVSFEKNDAYNGKYPAQTKKMVWNVNVDDTARVTA MQAGKTDVMENVPAKAVQTLTSSGSDIQTVQGFNQAFIMFNTKKKPFDDPRVRQAVFYSIDTKKLIDNQLSGQAQTVTSF LPENFANYHKAKNVYTKNTAKAKELLKEAGVNGPIKTTLYTTDQTWVTQLAPQIKNDLAESGIDVDIQSMKSSALYPSIT DKDGADFSMVLAPGDPSVFGNDPDLLMNWWYGDNVWTKQRTFWKGSEGYDELHDLMGKALSASSDAERQDYWNQCFDLLS EQVPLYPLFHRKVSTAVKKGVFDEYKTMGTTGLNLVQAKVAQ
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=411, Percent_Identity=24.5742092457421, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1789887, Length=437, Percent_Identity=27.9176201372998, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789966, Length=455, Percent_Identity=23.2967032967033, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1787762, Length=415, Percent_Identity=22.8915662650602, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1787551, Length=447, Percent_Identity=24.8322147651007, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789397, Length=438, Percent_Identity=21.689497716895, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 57155; Mature: 57155
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKINARVRAAVAAILAGGMVVAMAGCGGSSATAGATGTSIPDTITTEVAYASRDFMPNT CEEECHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC TSGALPMSANWHVVEPLYALDYTTYKTFPALAKGAPQKVSDTEYVITLRDGAKFSDGTPV CCCCCCCCCCCEEECCHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCC KASDVVSSYKRSTAEGSLFISMLDFIDSVEAKGDNQVDFKLKEAFPMFEKRLALIPIVPS CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCEEEEEECCC GKSDAELKKMPTGSGPWKYTAITDRQVSFEKNDAYNGKYPAQTKKMVWNVNVDDTARVTA CCCCCHHHHCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEE MQAGKTDVMENVPAKAVQTLTSSGSDIQTVQGFNQAFIMFNTKKKPFDDPRVRQAVFYSI ECCCCHHHHHCCCHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCCCCHHHHHHHEEEC DTKKLIDNQLSGQAQTVTSFLPENFANYHKAKNVYTKNTAKAKELLKEAGVNGPIKTTLY CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEE TTDQTWVTQLAPQIKNDLAESGIDVDIQSMKSSALYPSITDKDGADFSMVLAPGDPSVFG ECCHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCC NDPDLLMNWWYGDNVWTKQRTFWKGSEGYDELHDLMGKALSASSDAERQDYWNQCFDLLS CCCCEEEEEEECCCEEECCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EQVPLYPLFHRKVSTAVKKGVFDEYKTMGTTGLNLVQAKVAQ HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MVKINARVRAAVAAILAGGMVVAMAGCGGSSATAGATGTSIPDTITTEVAYASRDFMPNT CEEECHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC TSGALPMSANWHVVEPLYALDYTTYKTFPALAKGAPQKVSDTEYVITLRDGAKFSDGTPV CCCCCCCCCCCEEECCHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCC KASDVVSSYKRSTAEGSLFISMLDFIDSVEAKGDNQVDFKLKEAFPMFEKRLALIPIVPS CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCEEEEEECCC GKSDAELKKMPTGSGPWKYTAITDRQVSFEKNDAYNGKYPAQTKKMVWNVNVDDTARVTA CCCCCHHHHCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEE MQAGKTDVMENVPAKAVQTLTSSGSDIQTVQGFNQAFIMFNTKKKPFDDPRVRQAVFYSI ECCCCHHHHHCCCHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCCCCHHHHHHHEEEC DTKKLIDNQLSGQAQTVTSFLPENFANYHKAKNVYTKNTAKAKELLKEAGVNGPIKTTLY CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEE TTDQTWVTQLAPQIKNDLAESGIDVDIQSMKSSALYPSITDKDGADFSMVLAPGDPSVFG ECCHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCC NDPDLLMNWWYGDNVWTKQRTFWKGSEGYDELHDLMGKALSASSDAERQDYWNQCFDLLS CCCCEEEEEEECCCEEECCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EQVPLYPLFHRKVSTAVKKGVFDEYKTMGTTGLNLVQAKVAQ HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA