| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is nanE [H]
Identifier: 213691544
GI number: 213691544
Start: 742157
End: 742840
Strand: Direct
Name: nanE [H]
Synonym: Blon_0645
Alternate gene names: 213691544
Gene position: 742157-742840 (Clockwise)
Preceding gene: 213691543
Following gene: 213691546
Centisome position: 26.2
GC content: 67.25
Gene sequence:
>684_bases ATGATGAGCAGGAATCCGGTTATCGAACGTGTGAAAGGCGGACTCATCGTCAGCTGCCAGGCGTACCCCGGCGAACCGCT GCGCCACCCGGAGACGATGGCGCAGATGGCGATGGCGGCCGTCGAGGGCGGCGCGGTCGGCATCCGCTGTCAGGGACTCG CCGACATAGCAGCGATAAAGGGCCAGGTGGACGTGCCGGTCATCGGCATCTGGAAGGACGGTTCGCAAGGCGTGTACATC ACGCCGACGCTGCGTCATGCGCGCTGTTGCGCGGCGGCGGGCGCGGACATCGTGGCCTTGGATGCGACGGGACGGCCGCG CCCGGACGGGCGGACCTATGCGCAGACCGTGCAGGCGTTGCATGATGAGGGCGTCACGGTCATGGCCGATTGCGGCAGCT TCGACGATGCGCGCCGCGCCGTCGATGCGGGCAGCGACATCATCTCGACGACGCTTTCCGGGTACACGGGCGAACGGGAG AAGACCGACGGCCCCGATCTCGAGTTGCTCGAGTACATGGTGTCGTCGTTCCCCGATACGCCTGTGCTGTGCGAGGGCCG CATCCATACGCCCGAACAGCTGCATGACGTGATGAGCCGCGGCGCGTGGGCGGCCGTCGTCGGCACGGCGATCACCCATC CGACGTCGATCACGCGCTGGTTCGCCGCCCGGCTCGACCATTAA
Upstream 100 bases:
>100_bases TCATCGGCGCGGCCGTCGCGTCCCGTCGCGTCGTCGGTTGATCGGGCCGTCGCGTTCGGGCGCGGCGGCCGGCATACTCT GTGCAAGGAAAGGATACATA
Downstream 100 bases:
>100_bases CGGCCGGTGGGGGCATGTTCGGGAACATGCGTCGCACACGTGTTCCCGAACACGCCCTCAGTGCGTTTCGGCCGCGCCGA ATACGCTCAACGGCAGCGTG
Product: N-acetylmannosamine-6-phosphate 2-epimerase
Products: NA
Alternate protein names: ManNAc-6-P epimerase [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MMSRNPVIERVKGGLIVSCQAYPGEPLRHPETMAQMAMAAVEGGAVGIRCQGLADIAAIKGQVDVPVIGIWKDGSQGVYI TPTLRHARCCAAAGADIVALDATGRPRPDGRTYAQTVQALHDEGVTVMADCGSFDDARRAVDAGSDIISTTLSGYTGERE KTDGPDLELLEYMVSSFPDTPVLCEGRIHTPEQLHDVMSRGAWAAVVGTAITHPTSITRWFAARLDH
Sequences:
>Translated_227_residues MMSRNPVIERVKGGLIVSCQAYPGEPLRHPETMAQMAMAAVEGGAVGIRCQGLADIAAIKGQVDVPVIGIWKDGSQGVYI TPTLRHARCCAAAGADIVALDATGRPRPDGRTYAQTVQALHDEGVTVMADCGSFDDARRAVDAGSDIISTTLSGYTGERE KTDGPDLELLEYMVSSFPDTPVLCEGRIHTPEQLHDVMSRGAWAAVVGTAITHPTSITRWFAARLDH >Mature_227_residues MMSRNPVIERVKGGLIVSCQAYPGEPLRHPETMAQMAMAAVEGGAVGIRCQGLADIAAIKGQVDVPVIGIWKDGSQGVYI TPTLRHARCCAAAGADIVALDATGRPRPDGRTYAQTVQALHDEGVTVMADCGSFDDARRAVDAGSDIISTTLSGYTGERE KTDGPDLELLEYMVSSFPDTPVLCEGRIHTPEQLHDVMSRGAWAAVVGTAITHPTSITRWFAARLDH
Specific function: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential) [H]
COG id: COG3010
COG function: function code G; Putative N-acetylmannosamine-6-phosphate epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nanE family [H]
Homologues:
Organism=Escherichia coli, GI1789617, Length=213, Percent_Identity=43.6619718309859, Blast_Score=139, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007260 - InterPro: IPR011060 [H]
Pfam domain/function: PF04131 NanE [H]
EC number: =5.1.3.9 [H]
Molecular weight: Translated: 24171; Mature: 24171
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSRNPVIERVKGGLIVSCQAYPGEPLRHPETMAQMAMAAVEGGAVGIRCQGLADIAAIK CCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHC GQVDVPVIGIWKDGSQGVYITPTLRHARCCAAAGADIVALDATGRPRPDGRTYAQTVQAL CCCCCCEEEEEECCCCCEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH HDEGVTVMADCGSFDDARRAVDAGSDIISTTLSGYTGEREKTDGPDLELLEYMVSSFPDT HHCCCEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC PVLCEGRIHTPEQLHDVMSRGAWAAVVGTAITHPTSITRWFAARLDH CEEECCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MMSRNPVIERVKGGLIVSCQAYPGEPLRHPETMAQMAMAAVEGGAVGIRCQGLADIAAIK CCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHC GQVDVPVIGIWKDGSQGVYITPTLRHARCCAAAGADIVALDATGRPRPDGRTYAQTVQAL CCCCCCEEEEEECCCCCEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH HDEGVTVMADCGSFDDARRAVDAGSDIISTTLSGYTGEREKTDGPDLELLEYMVSSFPDT HHCCCEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC PVLCEGRIHTPEQLHDVMSRGAWAAVVGTAITHPTSITRWFAARLDH CEEECCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA