| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is glcK [H]
Identifier: 213691543
GI number: 213691543
Start: 741153
End: 742097
Strand: Direct
Name: glcK [H]
Synonym: Blon_0644
Alternate gene names: 213691543
Gene position: 741153-742097 (Clockwise)
Preceding gene: 213691542
Following gene: 213691544
Centisome position: 26.16
GC content: 70.37
Gene sequence:
>945_bases ATGAGCGATTTCCTCGCATTCGACATCGGAGGCACGAAGATCGCCAGCGGATTCGTCCGGCTGTCCGACGGCGATGCCGC TCCCACCGTGTTGCTGCGCGATGAGGAGCCGACACACGCCTCGCAGGGAGGCGACGCCGTGCGCGAGCGCATCGTCGCGT CCGCGCGCCGTCAGCTCGACCGCGCGCGTGCCCAAGGCATAGAGCCGTGCGGCATCGGCATCGCGGCCGCCGGCGTGCCC GACGGCGAGACCGGAGAGATCATCGCCGCGACGGATCTGCTCCCCGGATGGAAAGGCCAGCGGATCTACGATGCGTTCGG CGCGATCACCGATCTGCCGGTGCATATGGTCGGCGACGTCGTCGCGCATGGGCTCGGCGAAGCGCATTACGGCGCGGGGC GTGGCGCCCGTGTCCTCTTGTCGGTCGGCGTGGGCACCGGCATCGGCGGCGCGATCATCGTCGGCGGCGTGCCGTTCCTC GGCGCGCATGGCATGGCGGGACATGCCGGACATGTCGTGAGCGCTCTCGGTGCCGGGGTCCCGTGCTCGTGCGGAAGCGT CGAGGGGCATGTCGAACCGGTCGCAAGCGGCACCGGACTGGCGACGTTGTACAACATGCGCGCCGGTGGCGAACCGGTGC GCAATGGCGGCGACGTCGCCGCGCTTGCGGCGGATGGCGATGCGCTTGCCTCATCGGTCATCGAAGACAGCGCCCGGGCG CTCGGCGCGTGCATCGGAGGCATGGCGAATCTGGTGGATCCCGACGGCATCGTCGTCTCCGGGTCGGTCGTGAATGCGGG GCCGGTGTGGTGGGATGCGTTGCGCGATGGGTTCGCCCGTTCCGCATTGCCGTTGCTGCGCGATGTGCGGATGCGTGAGG GCGAGCTCGGCGGCGACGCGCCGCTCATCGGCGCGGCCGTCGCGTCCCGTCGCGTCGTCGGTTGA
Upstream 100 bases:
>100_bases GGCCGATCGCCTATGTCGGCGCGAAGGTGTGCGTGCCACGGGACGCGACGCTCGACGAGCGCGTGCGCTACCTGTCGCAC ATCCATGAGGCGGTGGAACA
Downstream 100 bases:
>100_bases TCGGGCCGTCGCGTTCGGGCGCGGCGGCCGGCATACTCTGTGCAAGGAAAGGATACATAATGATGAGCAGGAATCCGGTT ATCGAACGTGTGAAAGGCGG
Product: ROK family protein
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSDFLAFDIGGTKIASGFVRLSDGDAAPTVLLRDEEPTHASQGGDAVRERIVASARRQLDRARAQGIEPCGIGIAAAGVP DGETGEIIAATDLLPGWKGQRIYDAFGAITDLPVHMVGDVVAHGLGEAHYGAGRGARVLLSVGVGTGIGGAIIVGGVPFL GAHGMAGHAGHVVSALGAGVPCSCGSVEGHVEPVASGTGLATLYNMRAGGEPVRNGGDVAALAADGDALASSVIEDSARA LGACIGGMANLVDPDGIVVSGSVVNAGPVWWDALRDGFARSALPLLRDVRMREGELGGDAPLIGAAVASRRVVG
Sequences:
>Translated_314_residues MSDFLAFDIGGTKIASGFVRLSDGDAAPTVLLRDEEPTHASQGGDAVRERIVASARRQLDRARAQGIEPCGIGIAAAGVP DGETGEIIAATDLLPGWKGQRIYDAFGAITDLPVHMVGDVVAHGLGEAHYGAGRGARVLLSVGVGTGIGGAIIVGGVPFL GAHGMAGHAGHVVSALGAGVPCSCGSVEGHVEPVASGTGLATLYNMRAGGEPVRNGGDVAALAADGDALASSVIEDSARA LGACIGGMANLVDPDGIVVSGSVVNAGPVWWDALRDGFARSALPLLRDVRMREGELGGDAPLIGAAVASRRVVG >Mature_313_residues SDFLAFDIGGTKIASGFVRLSDGDAAPTVLLRDEEPTHASQGGDAVRERIVASARRQLDRARAQGIEPCGIGIAAAGVPD GETGEIIAATDLLPGWKGQRIYDAFGAITDLPVHMVGDVVAHGLGEAHYGAGRGARVLLSVGVGTGIGGAIIVGGVPFLG AHGMAGHAGHVVSALGAGVPCSCGSVEGHVEPVASGTGLATLYNMRAGGEPVRNGGDVAALAADGDALASSVIEDSARAL GACIGGMANLVDPDGIVVSGSVVNAGPVWWDALRDGFARSALPLLRDVRMREGELGGDAPLIGAAVASRRVVG
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI1787363, Length=307, Percent_Identity=28.6644951140065, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1786891, Length=287, Percent_Identity=27.5261324041812, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1787878, Length=287, Percent_Identity=24.0418118466899, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1790522, Length=156, Percent_Identity=30.7692307692308, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI87081733, Length=176, Percent_Identity=28.9772727272727, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 31286; Mature: 31155
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFLAFDIGGTKIASGFVRLSDGDAAPTVLLRDEEPTHASQGGDAVRERIVASARRQLD CCCEEEEECCCHHHHCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH RARAQGIEPCGIGIAAAGVPDGETGEIIAATDLLPGWKGQRIYDAFGAITDLPVHMVGDV HHHHCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHH VAHGLGEAHYGAGRGARVLLSVGVGTGIGGAIIVGGVPFLGAHGMAGHAGHVVSALGAGV HHHCCCCHHCCCCCCCEEEEEECCCCCCCCEEEECCCHHHCCCCCCCCHHHHHHHHCCCC PCSCGSVEGHVEPVASGTGLATLYNMRAGGEPVRNGGDVAALAADGDALASSVIEDSARA CCCCCCCCCCCEECCCCCCHHHEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH LGACIGGMANLVDPDGIVVSGSVVNAGPVWWDALRDGFARSALPLLRDVRMREGELGGDA HHHHHHHHHHCCCCCCEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PLIGAAVASRRVVG CHHHHHHHHHCCCC >Mature Secondary Structure SDFLAFDIGGTKIASGFVRLSDGDAAPTVLLRDEEPTHASQGGDAVRERIVASARRQLD CCEEEEECCCHHHHCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH RARAQGIEPCGIGIAAAGVPDGETGEIIAATDLLPGWKGQRIYDAFGAITDLPVHMVGDV HHHHCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHH VAHGLGEAHYGAGRGARVLLSVGVGTGIGGAIIVGGVPFLGAHGMAGHAGHVVSALGAGV HHHCCCCHHCCCCCCCEEEEEECCCCCCCCEEEECCCHHHCCCCCCCCHHHHHHHHCCCC PCSCGSVEGHVEPVASGTGLATLYNMRAGGEPVRNGGDVAALAADGDALASSVIEDSARA CCCCCCCCCCCEECCCCCCHHHEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH LGACIGGMANLVDPDGIVVSGSVVNAGPVWWDALRDGFARSALPLLRDVRMREGELGGDA HHHHHHHHHHCCCCCCEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PLIGAAVASRRVVG CHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]