| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691349
Identifier: 213691349
GI number: 213691349
Start: 508706
End: 509653
Strand: Direct
Name: 213691349
Synonym: Blon_0440
Alternate gene names: NA
Gene position: 508706-509653 (Clockwise)
Preceding gene: 213691348
Following gene: 213691351
Centisome position: 17.96
GC content: 58.02
Gene sequence:
>948_bases ATGGGTGTACGGGTAAAGGCGGCCGAATCGCCTCGTGCCGCCCCCGTGGATATGCAAGTTAAAGAGCACCGGCAGCATGA CTTAATGCACATAGAGCGTCCCCCGCATGGTTGTGCCACTGATGCCGGCCTGTACTGGGTCGGCTCAGGTGTCGATAACC AAGCTTTGTTCGATTTCGATGGCAAGGCGCTCGCCTCTCTGCCGACGTTCAAGTACATTCACACCGGTGCCGTCACCGAT CATGTGTTCACCAAGATAGATCCAGTGGAGATTATCGCGACTGACTCGGATTCCATCGACGTGATCAAAGCGCAATTGCC GAGTGAGGCGGCTGCACACTATCAGGATGGGGTGGACGAGACCGAAACCGTGACCTGGCAATCCGCTGCGCTTGACTGGA TTCGTGGCGCGGGCACATACACCATCACGGGCAACCTGCCTGCCGACGCATGGGGCAATGTGGACAAGGTCTCACTCGTC AAAAAGACCGAAACTCCGGTGAAGCCATCCACGGAGAACTTGGACAAGGCCGTGGCCGAATCCGGGGAAATCAATCGCGA TGAGTACACCAACGAGTCGCTCGCCAAACTCGATCAGGCGCTTGCCGCCGACCAGTTCATGCTCGATTACGATTTCTCCG CTCCCGCTGATGCGGCGAAGGTTACCGTAACGCTCAAGTCGAATCCGAATGTTACTGAAACCTATACGGTTGCTGTTGCC TCTCGGGCCGAAGGTGGTTCCGGCAGCGGCTCGGACGGTGCGGGTAATGGCGGGGCTACTATCAATCCCGATACGGGCGA GGGTGATAAGACCAACGGTGCGAATGGCGACGAGATTACTGGTGTGCTGAGCAATACCGGTAGCGCGGTGACTGCCGTGG GTCTTGCGGTTGTCGTTCTCGGCGTGGCCGGTGGGGTCTCGCTTGCTTTGCGTCGTAAGTGCTCCTGA
Upstream 100 bases:
>100_bases CCATGGGGCGGTGATTTCCTCATGGGGCGGTAGCTGAGAATGGCTCTATTCTGCGGAAGATAAAATTTTACCGACCGCCC CATGGGCAAGTTACCGCCCC
Downstream 100 bases:
>100_bases TAGAGACTGATGCGGCATTATGATGCGGTTGCCGGCAACTGGCTGCCAGATGCCATCTGTCGGTTTTCGTCTGCTGGATG CCATCTGTCGGCTGTCGTTT
Product: Ig domain protein
Products: NA
Alternate protein names: LPXTG-Motif Cell Wall Anchor Domain Protein; Ig Domain Protein
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MGVRVKAAESPRAAPVDMQVKEHRQHDLMHIERPPHGCATDAGLYWVGSGVDNQALFDFDGKALASLPTFKYIHTGAVTD HVFTKIDPVEIIATDSDSIDVIKAQLPSEAAAHYQDGVDETETVTWQSAALDWIRGAGTYTITGNLPADAWGNVDKVSLV KKTETPVKPSTENLDKAVAESGEINRDEYTNESLAKLDQALAADQFMLDYDFSAPADAAKVTVTLKSNPNVTETYTVAVA SRAEGGSGSGSDGAGNGGATINPDTGEGDKTNGANGDEITGVLSNTGSAVTAVGLAVVVLGVAGGVSLALRRKCS
Sequences:
>Translated_315_residues MGVRVKAAESPRAAPVDMQVKEHRQHDLMHIERPPHGCATDAGLYWVGSGVDNQALFDFDGKALASLPTFKYIHTGAVTD HVFTKIDPVEIIATDSDSIDVIKAQLPSEAAAHYQDGVDETETVTWQSAALDWIRGAGTYTITGNLPADAWGNVDKVSLV KKTETPVKPSTENLDKAVAESGEINRDEYTNESLAKLDQALAADQFMLDYDFSAPADAAKVTVTLKSNPNVTETYTVAVA SRAEGGSGSGSDGAGNGGATINPDTGEGDKTNGANGDEITGVLSNTGSAVTAVGLAVVVLGVAGGVSLALRRKCS >Mature_314_residues GVRVKAAESPRAAPVDMQVKEHRQHDLMHIERPPHGCATDAGLYWVGSGVDNQALFDFDGKALASLPTFKYIHTGAVTDH VFTKIDPVEIIATDSDSIDVIKAQLPSEAAAHYQDGVDETETVTWQSAALDWIRGAGTYTITGNLPADAWGNVDKVSLVK KTETPVKPSTENLDKAVAESGEINRDEYTNESLAKLDQALAADQFMLDYDFSAPADAAKVTVTLKSNPNVTETYTVAVAS RAEGGSGSGSDGAGNGGATINPDTGEGDKTNGANGDEITGVLSNTGSAVTAVGLAVVVLGVAGGVSLALRRKCS
Specific function: Unknown
COG id: COG3867
COG function: function code G; Arabinogalactan endo-1,4-beta-galactosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32845; Mature: 32714
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRVKAAESPRAAPVDMQVKEHRQHDLMHIERPPHGCATDAGLYWVGSGVDNQALFDFD CCEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEEECC GKALASLPTFKYIHTGAVTDHVFTKIDPVEIIATDSDSIDVIKAQLPSEAAAHYQDGVDE CCHHHCCCCEEEEECCCCHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHCCCCC TETVTWQSAALDWIRGAGTYTITGNLPADAWGNVDKVSLVKKTETPVKPSTENLDKAVAE CCEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH SGEINRDEYTNESLAKLDQALAADQFMLDYDFSAPADAAKVTVTLKSNPNVTETYTVAVA CCCCCCHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEE SRAEGGSGSGSDGAGNGGATINPDTGEGDKTNGANGDEITGVLSNTGSAVTAVGLAVVVL ECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH GVAGGVSLALRRKCS HHCCCCEEHHHCCCC >Mature Secondary Structure GVRVKAAESPRAAPVDMQVKEHRQHDLMHIERPPHGCATDAGLYWVGSGVDNQALFDFD CEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEEECC GKALASLPTFKYIHTGAVTDHVFTKIDPVEIIATDSDSIDVIKAQLPSEAAAHYQDGVDE CCHHHCCCCEEEEECCCCHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHCCCCC TETVTWQSAALDWIRGAGTYTITGNLPADAWGNVDKVSLVKKTETPVKPSTENLDKAVAE CCEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH SGEINRDEYTNESLAKLDQALAADQFMLDYDFSAPADAAKVTVTLKSNPNVTETYTVAVA CCCCCCHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEE SRAEGGSGSGSDGAGNGGATINPDTGEGDKTNGANGDEITGVLSNTGSAVTAVGLAVVVL ECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH GVAGGVSLALRRKCS HHCCCCEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA