| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is prs [H]
Identifier: 213691154
GI number: 213691154
Start: 279667
End: 280680
Strand: Reverse
Name: prs [H]
Synonym: Blon_0233
Alternate gene names: 213691154
Gene position: 280680-279667 (Counterclockwise)
Preceding gene: 213691160
Following gene: 213691147
Centisome position: 9.91
GC content: 59.86
Gene sequence:
>1014_bases ATGTCGGCGATTCTTGAAGGCACTCCGGATAAACGACTCGTATTGGTCACGGGCCGCGCCTACCCCGAGCTAGCTGAGAA GGTGGCCGAATGCTTGGGAACCGAAATCCTCGAAACCACGTCCTATGACTTTGCCAATGGCGAGATGTACGTGCGTTTCA CCGAACCGGTGCGTGGTGCGGACGTGTTCGTGCTGCAGTGTCATTCGGGCGATATCAACAAGTGGATCATGGAACAGCTC ATCATGATCGACGCTTTGAAGCGCGCCTCCGCCAAGTCGATTACCGTGGTGGCGCCCTTCCTCGGCTACTCGCGCCAGGA TAAGAAGCACCGCGGTCGTGAGCCCATCACCGCCCGTCTGATTTTCGATCTGTTCCACGCCGCCGGTGCCGACCGCATTA TGACGGTCGATCTGCACGCCGCTCAGGAGCAGGGTTTCTTCGATGGTCCGGTCGATCATCTAACCGCCATGCCGGTGCTG CTCGATTACGTGCGTTCCACCCTTGATCTGGGCAACACCACCATCGTGTCCCCGGATGCCGGCCGTATCAAGGTGTCCGA ACAGTGGGCCGCCAAGCTAGGCAATCTGCCGCTGGCGTTCATCCACAAACAGCGTGATATCACCCGCCCGAACCATGCCG AGGCACATGGCATTATCGGCGATGTCGACGGCCGCAACTGCGTGGTCATCGACGACATGGTCGATACCGCCGGTACTATC TGCGAAGCCGTGCGCACACTGAACGAATCCGGCGCCAAGTCGGTGACCTTGGTCGCCACTCATGGCTTGCTTTCCGGCCC GGCCGTGGAGCGACTGGCCAACTGCGGCGCGCATGAAATCGTGTTTATGGACACCGTGCCGATTCCTGAAGAGAAGCGCC TGCCGAATATGACCGTGCTGTCTTGCGCACCGCTGCTGGCCGCGGGTATTCGCTCCGTGTTCGAGGAAGGTTCTGTGGCG ATTCTGCTCGACGGCCTGCCCGAAGACATGCGTCCGCGCAATATCTATGCGTGA
Upstream 100 bases:
>100_bases CACTCTTACAACACAGCCCCACTTCACGGCACGCGCTGCGGTGGGGTGCTAGTACACTGGTTAAGGCTAAAAACACTGCA ACACAAAAGGATGCGAAAGC
Downstream 100 bases:
>100_bases TTGATACGCCGAAAATCCTTACGAAAAGACGCCGCTTGGCTATTGATCAAGCGGCGTTTTTCCGTATAGCTCCAATCAGA TGAAAGCGCGCTCGCCGAAG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSAILEGTPDKRLVLVTGRAYPELAEKVAECLGTEILETTSYDFANGEMYVRFTEPVRGADVFVLQCHSGDINKWIMEQL IMIDALKRASAKSITVVAPFLGYSRQDKKHRGREPITARLIFDLFHAAGADRIMTVDLHAAQEQGFFDGPVDHLTAMPVL LDYVRSTLDLGNTTIVSPDAGRIKVSEQWAAKLGNLPLAFIHKQRDITRPNHAEAHGIIGDVDGRNCVVIDDMVDTAGTI CEAVRTLNESGAKSVTLVATHGLLSGPAVERLANCGAHEIVFMDTVPIPEEKRLPNMTVLSCAPLLAAGIRSVFEEGSVA ILLDGLPEDMRPRNIYA
Sequences:
>Translated_337_residues MSAILEGTPDKRLVLVTGRAYPELAEKVAECLGTEILETTSYDFANGEMYVRFTEPVRGADVFVLQCHSGDINKWIMEQL IMIDALKRASAKSITVVAPFLGYSRQDKKHRGREPITARLIFDLFHAAGADRIMTVDLHAAQEQGFFDGPVDHLTAMPVL LDYVRSTLDLGNTTIVSPDAGRIKVSEQWAAKLGNLPLAFIHKQRDITRPNHAEAHGIIGDVDGRNCVVIDDMVDTAGTI CEAVRTLNESGAKSVTLVATHGLLSGPAVERLANCGAHEIVFMDTVPIPEEKRLPNMTVLSCAPLLAAGIRSVFEEGSVA ILLDGLPEDMRPRNIYA >Mature_336_residues SAILEGTPDKRLVLVTGRAYPELAEKVAECLGTEILETTSYDFANGEMYVRFTEPVRGADVFVLQCHSGDINKWIMEQLI MIDALKRASAKSITVVAPFLGYSRQDKKHRGREPITARLIFDLFHAAGADRIMTVDLHAAQEQGFFDGPVDHLTAMPVLL DYVRSTLDLGNTTIVSPDAGRIKVSEQWAAKLGNLPLAFIHKQRDITRPNHAEAHGIIGDVDGRNCVVIDDMVDTAGTIC EAVRTLNESGAKSVTLVATHGLLSGPAVERLANCGAHEIVFMDTVPIPEEKRLPNMTVLSCAPLLAAGIRSVFEEGSVAI LLDGLPEDMRPRNIYA
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=317, Percent_Identity=40.6940063091483, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI4506127, Length=315, Percent_Identity=40.9523809523809, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI84875539, Length=320, Percent_Identity=40.3125, Blast_Score=234, Evalue=6e-62, Organism=Homo sapiens, GI28557709, Length=315, Percent_Identity=40.3174603174603, Blast_Score=231, Evalue=5e-61, Organism=Homo sapiens, GI4506133, Length=335, Percent_Identity=33.7313432835821, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI194018537, Length=339, Percent_Identity=33.6283185840708, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI310128524, Length=148, Percent_Identity=28.3783783783784, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI310115209, Length=148, Percent_Identity=28.3783783783784, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI310118259, Length=148, Percent_Identity=28.3783783783784, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI310119946, Length=148, Percent_Identity=28.3783783783784, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1787458, Length=318, Percent_Identity=42.7672955974843, Blast_Score=253, Evalue=1e-68, Organism=Caenorhabditis elegans, GI25149168, Length=315, Percent_Identity=39.3650793650794, Blast_Score=229, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17554704, Length=315, Percent_Identity=39.3650793650794, Blast_Score=229, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17554702, Length=315, Percent_Identity=39.3650793650794, Blast_Score=228, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71989924, Length=315, Percent_Identity=39.3650793650794, Blast_Score=227, Evalue=6e-60, Organism=Caenorhabditis elegans, GI17570245, Length=338, Percent_Identity=32.2485207100592, Blast_Score=170, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6319403, Length=316, Percent_Identity=41.4556962025316, Blast_Score=234, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6320946, Length=315, Percent_Identity=40.9523809523809, Blast_Score=233, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6321776, Length=321, Percent_Identity=38.9408099688474, Blast_Score=227, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=39.7959183673469, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6324511, Length=95, Percent_Identity=38.9473684210526, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI21355239, Length=315, Percent_Identity=39.3650793650794, Blast_Score=232, Evalue=3e-61, Organism=Drosophila melanogaster, GI45551540, Length=338, Percent_Identity=36.9822485207101, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24651458, Length=362, Percent_Identity=31.767955801105, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24651456, Length=362, Percent_Identity=31.767955801105, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI281362873, Length=362, Percent_Identity=31.767955801105, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24651454, Length=362, Percent_Identity=31.767955801105, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24651462, Length=222, Percent_Identity=36.4864864864865, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24651464, Length=222, Percent_Identity=36.4864864864865, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI45552010, Length=222, Percent_Identity=36.4864864864865, Blast_Score=134, Evalue=8e-32,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 36742; Mature: 36610
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAILEGTPDKRLVLVTGRAYPELAEKVAECLGTEILETTSYDFANGEMYVRFTEPVRGA CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCC DVFVLQCHSGDINKWIMEQLIMIDALKRASAKSITVVAPFLGYSRQDKKHRGREPITARL EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCHHHCCCCCHHHHH IFDLFHAAGADRIMTVDLHAAQEQGFFDGPVDHLTAMPVLLDYVRSTLDLGNTTIVSPDA HHHHHHHCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC GRIKVSEQWAAKLGNLPLAFIHKQRDITRPNHAEAHGIIGDVDGRNCVVIDDMVDTAGTI CEEEECHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHHH CEAVRTLNESGAKSVTLVATHGLLSGPAVERLANCGAHEIVFMDTVPIPEEKRLPNMTVL HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHCCCCCHHH SCAPLLAAGIRSVFEEGSVAILLDGLPEDMRPRNIYA HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SAILEGTPDKRLVLVTGRAYPELAEKVAECLGTEILETTSYDFANGEMYVRFTEPVRGA CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCC DVFVLQCHSGDINKWIMEQLIMIDALKRASAKSITVVAPFLGYSRQDKKHRGREPITARL EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCHHHCCCCCHHHHH IFDLFHAAGADRIMTVDLHAAQEQGFFDGPVDHLTAMPVLLDYVRSTLDLGNTTIVSPDA HHHHHHHCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC GRIKVSEQWAAKLGNLPLAFIHKQRDITRPNHAEAHGIIGDVDGRNCVVIDDMVDTAGTI CEEEECHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHHH CEAVRTLNESGAKSVTLVATHGLLSGPAVERLANCGAHEIVFMDTVPIPEEKRLPNMTVL HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHCCCCCHHH SCAPLLAAGIRSVFEEGSVAILLDGLPEDMRPRNIYA HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]