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The map label for this gene is tpd [H]

Identifier: 213691118

GI number: 213691118

Start: 236496

End: 237191

Strand: Direct

Name: tpd [H]

Synonym: Blon_0197

Alternate gene names: 213691118

Gene position: 236496-237191 (Clockwise)

Preceding gene: 213691117

Following gene: 213691119

Centisome position: 8.35

GC content: 61.78

Gene sequence:

>696_bases
ATGATGAAGAACAAGAAGCTTGCTGCTCTGCTCGGCGTGCTGCTCGCCGGCTCCATGGCTGTTTCGATGGCTGCTTGCGG
TTCCACCAACAACGCTTCCGATACCAAGTCCTCGACCAGCTCCTCCGACACCGCCAAGAAGGACGACTCCAAGAAGGCCG
ACGCCCCGACTGAGACCTCCGGCTTCGAAGAGGTCCCGGTCGGTCCCTCCGGCACAGCCAAGGAGCAGGACAAGGCCGCT
GGCCCGCTGACCGTGGGCGCCGTCTACTTCCAGCCCATCGACATGTACCCTGCGTCCATGGGTCTGAAGGCTGCTGATGC
TTCCTTCCACCTGGAAGCCGACATCCACGCCTCTGAGGAAGGCACCGACTACGGCTACGGCAAGGGCGACTTCGTCCCTG
ACCTGACTGTGAACTACACCATCATCGACAAGTCCACCGGCAAGGAAGTCGAGGGCGGCCAGGCCACCTCCGGTACCTTC
ATGCAGATGAACGCTTCCGACGGCCCGCACTACGGCGCCAACGTCAAGCTCGACAAGGCCGGCACCTACCAGCTCAAGCT
CTCCATCGAGTCCCCTGAGAAGAACGGCTGGATGCTCCACGTTGACCCGGAGACCGGTGTCAAGAACCACAAGTTCTGGA
CCGAGCCCATCGAGGTCACCTTCGACAACTGGGACTACACCCCGCGTCAGTGGTGA

Upstream 100 bases:

>100_bases
CAACTTGCGACATGGCAACGGAAGCGATTCCAGCCCACGCCGCCACAACTAAAAACAGATAATAAATAATCCATTCACCA
CAACAAAAGGAATAAGAGAA

Downstream 100 bases:

>100_bases
TTGACTAAGCAGAAAGCCCCTTCGTCAGAGGGGGCTTTACGCCGCTTTAGGGAGATAATTCTTAGGACGGTCTAAAAACT
CCCCTCAGTCCGCTTTGCGG

Product: narrowly conserved hypothetical protein

Products: NA

Alternate protein names: Pathogen-specific membrane antigen [H]

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MMKNKKLAALLGVLLAGSMAVSMAACGSTNNASDTKSSTSSSDTAKKDDSKKADAPTETSGFEEVPVGPSGTAKEQDKAA
GPLTVGAVYFQPIDMYPASMGLKAADASFHLEADIHASEEGTDYGYGKGDFVPDLTVNYTIIDKSTGKEVEGGQATSGTF
MQMNASDGPHYGANVKLDKAGTYQLKLSIESPEKNGWMLHVDPETGVKNHKFWTEPIEVTFDNWDYTPRQW

Sequences:

>Translated_231_residues
MMKNKKLAALLGVLLAGSMAVSMAACGSTNNASDTKSSTSSSDTAKKDDSKKADAPTETSGFEEVPVGPSGTAKEQDKAA
GPLTVGAVYFQPIDMYPASMGLKAADASFHLEADIHASEEGTDYGYGKGDFVPDLTVNYTIIDKSTGKEVEGGQATSGTF
MQMNASDGPHYGANVKLDKAGTYQLKLSIESPEKNGWMLHVDPETGVKNHKFWTEPIEVTFDNWDYTPRQW
>Mature_231_residues
MMKNKKLAALLGVLLAGSMAVSMAACGSTNNASDTKSSTSSSDTAKKDDSKKADAPTETSGFEEVPVGPSGTAKEQDKAA
GPLTVGAVYFQPIDMYPASMGLKAADASFHLEADIHASEEGTDYGYGKGDFVPDLTVNYTIIDKSTGKEVEGGQATSGTF
MQMNASDGPHYGANVKLDKAGTYQLKLSIESPEKNGWMLHVDPETGVKNHKFWTEPIEVTFDNWDYTPRQW

Specific function: This antigen is a pathogen-specific membrane immunogen [H]

COG id: COG3470

COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0423 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018470 [H]

Pfam domain/function: PF10634 Iron_transport [H]

EC number: NA

Molecular weight: Translated: 24691; Mature: 24691

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNKKLAALLGVLLAGSMAVSMAACGSTNNASDTKSSTSSSDTAKKDDSKKADAPTETS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GFEEVPVGPSGTAKEQDKAAGPLTVGAVYFQPIDMYPASMGLKAADASFHLEADIHASEE
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEECCCEEEEEEEEECCCC
GTDYGYGKGDFVPDLTVNYTIIDKSTGKEVEGGQATSGTFMQMNASDGPHYGANVKLDKA
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCC
GTYQLKLSIESPEKNGWMLHVDPETGVKNHKFWTEPIEVTFDNWDYTPRQW
CEEEEEEEEECCCCCCEEEEECCCCCCCCCEEECCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MMKNKKLAALLGVLLAGSMAVSMAACGSTNNASDTKSSTSSSDTAKKDDSKKADAPTETS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GFEEVPVGPSGTAKEQDKAAGPLTVGAVYFQPIDMYPASMGLKAADASFHLEADIHASEE
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEECCCEEEEEEEEECCCC
GTDYGYGKGDFVPDLTVNYTIIDKSTGKEVEGGQATSGTFMQMNASDGPHYGANVKLDKA
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCC
GTYQLKLSIESPEKNGWMLHVDPETGVKNHKFWTEPIEVTFDNWDYTPRQW
CEEEEEEEEECCCCCCEEEEECCCCCCCCCEEECCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2680970; 9665876; 1894360 [H]