| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691119
Identifier: 213691119
GI number: 213691119
Start: 237344
End: 238612
Strand: Direct
Name: 213691119
Synonym: Blon_0198
Alternate gene names: NA
Gene position: 237344-238612 (Clockwise)
Preceding gene: 213691118
Following gene: 213691120
Centisome position: 8.38
GC content: 63.67
Gene sequence:
>1269_bases ATGCTTGAACAATTCGTGGCAGTGATGCCGGGCACCTTGGCCCCCACATTGCTGGTGATGAGCCTGAGCGTGATGCTCAC GGTCGGCGAGGGGCGAGATAAGCCGATAAGCTCGCATTGGCGTCTCATCGGCCTGACCGTCGGCCTGATCGCCGCTATCA CATTCGCCGGCCTGCGCGCCTCGGCCGTGATCAACCAGCGCACGTTCGTCAACTATCCGGTGCTGTGGTGCGCGATCATT GCCGACATCCTGACCATCGTCGTGGTGGTGTTCGCACGCCGCATCACCACCAATTGGCAGCAGCACAAGGTGTTCATGCA CATTGCGAACGCCGTGGCCGCCATCGACATCGCGCTCACCCTGTTCTACGCGCTGCCGGACGTGATCCTGCAGCTGACCA TCTGGGTGGAGCCCGGCGACCCGATCTTCACGTCCGACATGCTGCTGCGCGCGCTCGGCTTCGCGCTGGGCCTGGCCATG TCGATCATCGTGGCCGTGATCTTCCGCACGATGCGTTCGACCGCGGTGCGTGCCTCGTTCACCGCCGCCGTTCTCGCGGT GCTGGTGATTCTGTTCGTCCGGCACCTGACCGGTGTCATGCAGATCCTGCAGGCACGCGGTTTCCCGATAGGCCACACGG GATTCGTGGCCCTCGCCTGGTTGATCAACCACAACGACTGGATGATCATGGCCCAGGCGTTCGTGTTCCTGATTCCGGCC GTCGCCTCCGTGGTGGCCGGCTTCCGCATGCCGCTGACCGGCGCGAACGAAGCCATCGGCCGCAAGCACAAGGCGTTCCG CCGCCGCGCCGTGGCCTCCGCTGTCTGGAGCCTCGTGGCCATGATCGGCGTCACGCTGACCCTCACCGTCGGCGTCGCCG CGACCCATCAGACCATCACTCTTTCGCCGCCGGAAGCCTACTCGCTCAAGGACGGCGTGGCCACCATTCCCTTCAGCCAG GTCGAGGACGGCCACCTGCACCGTTTCGAATACAAGGCCAAGGACGGCACCGTCATGCGCTTCATCATCATCCGAAAGAA CGGTGGCGCGTACGGCATCGGCCTGGACGCCTGCGAGAACTGCGGCGACGCCGGCTACTACGAGAAGGACGGCAAGATCA TCTGCAAGAAGTGCGAGGTGGCCATCAACCTGGCGACCATCGGCTTCAAGGGTGGCTGCAACCCGATACCATTCCCGTAC AAGACCGGCCACGGCAAGATCACCATTCAGACTACGGATCTGGACGCGCTGAGCGCCCACTTCCAGTGA
Upstream 100 bases:
>100_bases AGATAATTCTTAGGACGGTCTAAAAACTCCCCTCAGTCCGCTTTGCGGACAGCTCCTCTCAGGGGTGGGGGAGCCTAAGG TGAATAGAGAAAGGACGCGA
Downstream 100 bases:
>100_bases GTCAGGCAGGAGGCAAGAATCATGTTCTTTCTGCGTATGATTACTCGCTCGTTCACCCGACAGCTGCGCCGGCGCCTGCT TATCGCGCTGACCGTATGCC
Product: narrowly conserved hypothetical membrane protein
Products: NA
Alternate protein names: YHS Domain Protein; YHS Domain-Containing Protein
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLEQFVAVMPGTLAPTLLVMSLSVMLTVGEGRDKPISSHWRLIGLTVGLIAAITFAGLRASAVINQRTFVNYPVLWCAII ADILTIVVVVFARRITTNWQQHKVFMHIANAVAAIDIALTLFYALPDVILQLTIWVEPGDPIFTSDMLLRALGFALGLAM SIIVAVIFRTMRSTAVRASFTAAVLAVLVILFVRHLTGVMQILQARGFPIGHTGFVALAWLINHNDWMIMAQAFVFLIPA VASVVAGFRMPLTGANEAIGRKHKAFRRRAVASAVWSLVAMIGVTLTLTVGVAATHQTITLSPPEAYSLKDGVATIPFSQ VEDGHLHRFEYKAKDGTVMRFIIIRKNGGAYGIGLDACENCGDAGYYEKDGKIICKKCEVAINLATIGFKGGCNPIPFPY KTGHGKITIQTTDLDALSAHFQ
Sequences:
>Translated_422_residues MLEQFVAVMPGTLAPTLLVMSLSVMLTVGEGRDKPISSHWRLIGLTVGLIAAITFAGLRASAVINQRTFVNYPVLWCAII ADILTIVVVVFARRITTNWQQHKVFMHIANAVAAIDIALTLFYALPDVILQLTIWVEPGDPIFTSDMLLRALGFALGLAM SIIVAVIFRTMRSTAVRASFTAAVLAVLVILFVRHLTGVMQILQARGFPIGHTGFVALAWLINHNDWMIMAQAFVFLIPA VASVVAGFRMPLTGANEAIGRKHKAFRRRAVASAVWSLVAMIGVTLTLTVGVAATHQTITLSPPEAYSLKDGVATIPFSQ VEDGHLHRFEYKAKDGTVMRFIIIRKNGGAYGIGLDACENCGDAGYYEKDGKIICKKCEVAINLATIGFKGGCNPIPFPY KTGHGKITIQTTDLDALSAHFQ >Mature_422_residues MLEQFVAVMPGTLAPTLLVMSLSVMLTVGEGRDKPISSHWRLIGLTVGLIAAITFAGLRASAVINQRTFVNYPVLWCAII ADILTIVVVVFARRITTNWQQHKVFMHIANAVAAIDIALTLFYALPDVILQLTIWVEPGDPIFTSDMLLRALGFALGLAM SIIVAVIFRTMRSTAVRASFTAAVLAVLVILFVRHLTGVMQILQARGFPIGHTGFVALAWLINHNDWMIMAQAFVFLIPA VASVVAGFRMPLTGANEAIGRKHKAFRRRAVASAVWSLVAMIGVTLTLTVGVAATHQTITLSPPEAYSLKDGVATIPFSQ VEDGHLHRFEYKAKDGTVMRFIIIRKNGGAYGIGLDACENCGDAGYYEKDGKIICKKCEVAINLATIGFKGGCNPIPFPY KTGHGKITIQTTDLDALSAHFQ
Specific function: Unknown
COG id: COG4393
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45762; Mature: 45762
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEQFVAVMPGTLAPTLLVMSLSVMLTVGEGRDKPISSHWRLIGLTVGLIAAITFAGLRA CCCHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SAVINQRTFVNYPVLWCAIIADILTIVVVVFARRITTNWQQHKVFMHIANAVAAIDIALT HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LFYALPDVILQLTIWVEPGDPIFTSDMLLRALGFALGLAMSIIVAVIFRTMRSTAVRASF HHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAVLAVLVILFVRHLTGVMQILQARGFPIGHTGFVALAWLINHNDWMIMAQAFVFLIPA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH VASVVAGFRMPLTGANEAIGRKHKAFRRRAVASAVWSLVAMIGVTLTLTVGVAATHQTIT HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEE LSPPEAYSLKDGVATIPFSQVEDGHLHRFEYKAKDGTVMRFIIIRKNGGAYGIGLDACEN ECCCCCCCCCCCCEECCHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEECHHHHHC CGDAGYYEKDGKIICKKCEVAINLATIGFKGGCNPIPFPYKTGHGKITIQTTDLDALSAH CCCCCEEECCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEECCCCEEEEEECCCHHHHCC FQ CC >Mature Secondary Structure MLEQFVAVMPGTLAPTLLVMSLSVMLTVGEGRDKPISSHWRLIGLTVGLIAAITFAGLRA CCCHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SAVINQRTFVNYPVLWCAIIADILTIVVVVFARRITTNWQQHKVFMHIANAVAAIDIALT HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LFYALPDVILQLTIWVEPGDPIFTSDMLLRALGFALGLAMSIIVAVIFRTMRSTAVRASF HHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAVLAVLVILFVRHLTGVMQILQARGFPIGHTGFVALAWLINHNDWMIMAQAFVFLIPA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH VASVVAGFRMPLTGANEAIGRKHKAFRRRAVASAVWSLVAMIGVTLTLTVGVAATHQTIT HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEE LSPPEAYSLKDGVATIPFSQVEDGHLHRFEYKAKDGTVMRFIIIRKNGGAYGIGLDACEN ECCCCCCCCCCCCEECCHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEECHHHHHC CGDAGYYEKDGKIICKKCEVAINLATIGFKGGCNPIPFPYKTGHGKITIQTTDLDALSAH CCCCCEEECCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEECCCCEEEEEECCCHHHHCC FQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA