Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is pbpG [H]

Identifier: 213691092

GI number: 213691092

Start: 200999

End: 203320

Strand: Reverse

Name: pbpG [H]

Synonym: Blon_0171

Alternate gene names: 213691092

Gene position: 203320-200999 (Counterclockwise)

Preceding gene: 213691097

Following gene: 213691090

Centisome position: 7.18

GC content: 59.22

Gene sequence:

>2322_bases
ATGGCTTCTTATACTCGTCGTGCACATTCGGGAGGCAATGGCCCCGCTCTGAGGCAACCGCGCACCGCGCAAAGCAGAGC
CGACCACTCCGCACAGGAGGGCCCCTATACGCCCCAGGAGAGCCGTTCCCGCCACGCAAGCCACAAGGCTTCCAATAGCC
ATCGAGCTCCGAACAGGAAGAAGAACACGGGAAAAGGCAAGCACCGTGTACTGAAATGGGTGCTGGGCATCTTCTTCTCC
CTGATTGGACTGGGCGTGCTGGCCGGTATCGCAGTATTCGCATATCTGTACACCACCACTGAGGTCCCGCAACCCGAGAA
GTTCGCGTTGGCCGAGAAAACCACCGTGTATTACGCGGACGGCACCACCGCGATCGGCTCCTACGCGGAGCAGAATCGTT
CAATCATTTCTTGCGAGGGGCTGCCGGACTACATCGGCAACGCGATTGTGGCGTCTGAAAACCGTACGTTCTACACGGAT
AAAGGTCTTGATCTGAAGGGCATCGCCCGCGCATTCATTAATAATGTGACCAAGGGCACGCGCCAAGGTGGTTCCACCAT
CACCCAGCAGTACGCCGAGCGGTATTACATGGGCGAAACCACATCCTATGTGGGCAAGGCGCGCGAGGCCATCATGGCCC
TCAAGATCGCGCAGACCGAGTCCAAGGACGAGGTGCTGTGCAACTACATGAACACCATCTATCTGGGCCGCAACTCCTAC
GGTATCCAGGAAGCAGCCAAGGCATACTTCAATAAGGACGCCAAGGATCTGACGCTGTCTGAGGCGGCGATGATCGCCGG
CATTATTCCGTCACCGTCCACGTGGGATCCAGCCGATAACGCCGATATGGCCAAATCGCGCTTCAAGCGTGTGCTGAACA
TCATGCAGGAGGATGGTTACATCACCGCCAGGCAGCACACTGATGCCAAGTTCCCGCAGACCGCCGCGGTGGCGCAGCAG
AACGAGTACGCGGGGCCGAACGGTTATCTGCTGGATATGGTGTGCCGTGAGCTGGTGCAGTCCAAGGCCTTTACCAAAGA
GGATTTGGATACCGGCGGATACAAGATCATCAGCACCATCGACAAGGGCAAGCAGGATCTCATGCAGTCCATCGGCGACA
CCCGCCTCAACGACATGCCCGAATCCCTGCAGATCGGCGGCATAGCGCTCAACCCCAAGAACGGCGAAGTATTGTCCGTA
TACGCCGGTTCGGATTATCTGTCCAAGCAGCTCAACAACGCCGATCAGGCCCTGTTCGAACCGGGTTCGACTATGAAGCC
GTTCGCTTTGCTGGGGGCCGCGCAATCCGGCGTCAGCTTCGATACGTTGTTCAACGGCAATTCCCACCAGCACTTCACCG
GCTTGGATCAAGAGGTGAATAACGCTCTGGAGAACAACTGGGGCAGCATCAATCTGTATCAGGCCACCGCGAACTCGGTG
AACACGGTGTTCATGAACGTCAATGAGCATCTGACGCCGAAACGCACGGCCGATATCGCCCATGAGGCTGGCATCCAGGG
CGACATCGACGAGGCCTCCATGTACAACGTGCTGGGCATCAACGCCCTGACCGTGTGGGATCTGGCGCAGGGCCATTCGA
CCATCGCCAACAATGGCGTGAGGAACACCTTGCATATGGTGTCCAAAGTGCTCGACTCCCACAACAAGGACATGTACAAC
GCGCCCAGCGAAGGCACCAAGGTGTTCGACGCCAATGATTGCGCCCTGGTGCAGAAAGCCATGCAGGGCACGACCACCTA
CGGCACCGCGGCCGGCACATCGGCCAAGCTGGGCCGTCCCATCGCCGGCAAGTCCGGCACCGCCAACGACGAACTGGCAT
CATCGTTCGTGGGGTACGCCCCAAGCATGATGAATGTCTGGGCCATCTGGAACCCGGATGGCAACGGCAATCCTCAAGTG
GTGCCGGCTTTCTCGGGATATGGCATCTCCTCCACCGGATATCCGGCGCACCTGTTCCAGGAATTCATGGCCCAGGCCCT
GCAGGGCACGGCGGTGGAGCAGTTCCCGACGGCCAAAGACAACGGCAAGATCGGCGGCCCCGATGGCACTTGGGGCCTGG
CCAGGGGGCAGAGCGGCGTCCAACCCTACGTCAACAACCAGTCCAACGCCAACAGGCAGTCCACCGAAGATGCGCAGAAG
CAGGCTGAGCAGGACGCACAGCAGAAGGCGGCCGAAGAGGAAGCCAAGAAGCGACAGCAGGCCCAGGAGTTCGCCCAGCA
GTGCCTCGCCAATCCGAGCTATTCCACCGAGTGCCCGAATTATCCCGGCAATACCGGCGCTGACAACGAGAACAAACGGT
AA

Upstream 100 bases:

>100_bases
CGTTCCCAATTGTAAGAATTCCGGAAAAATACCGGTATCAACGCGTGTGGTTACGCTCACGTCAAACGATTGTTCAAGGC
CAACAGTTACGGTGGACACC

Downstream 100 bases:

>100_bases
CGATAATGGGTAATTCCGGAGGCACCGGCGGGAACACCGACACCAACGGCGTCAAGTAGTAAGTAGACACAGACAACGAA
GCTCCCTCTGACGCAATCAG

Product: glycosyl transferase, family 51

Products: NA

Alternate protein names: PBP-2D; PBP2d [H]

Number of amino acids: Translated: 773; Mature: 772

Protein sequence:

>773_residues
MASYTRRAHSGGNGPALRQPRTAQSRADHSAQEGPYTPQESRSRHASHKASNSHRAPNRKKNTGKGKHRVLKWVLGIFFS
LIGLGVLAGIAVFAYLYTTTEVPQPEKFALAEKTTVYYADGTTAIGSYAEQNRSIISCEGLPDYIGNAIVASENRTFYTD
KGLDLKGIARAFINNVTKGTRQGGSTITQQYAERYYMGETTSYVGKAREAIMALKIAQTESKDEVLCNYMNTIYLGRNSY
GIQEAAKAYFNKDAKDLTLSEAAMIAGIIPSPSTWDPADNADMAKSRFKRVLNIMQEDGYITARQHTDAKFPQTAAVAQQ
NEYAGPNGYLLDMVCRELVQSKAFTKEDLDTGGYKIISTIDKGKQDLMQSIGDTRLNDMPESLQIGGIALNPKNGEVLSV
YAGSDYLSKQLNNADQALFEPGSTMKPFALLGAAQSGVSFDTLFNGNSHQHFTGLDQEVNNALENNWGSINLYQATANSV
NTVFMNVNEHLTPKRTADIAHEAGIQGDIDEASMYNVLGINALTVWDLAQGHSTIANNGVRNTLHMVSKVLDSHNKDMYN
APSEGTKVFDANDCALVQKAMQGTTTYGTAAGTSAKLGRPIAGKSGTANDELASSFVGYAPSMMNVWAIWNPDGNGNPQV
VPAFSGYGISSTGYPAHLFQEFMAQALQGTAVEQFPTAKDNGKIGGPDGTWGLARGQSGVQPYVNNQSNANRQSTEDAQK
QAEQDAQQKAAEEEAKKRQQAQEFAQQCLANPSYSTECPNYPGNTGADNENKR

Sequences:

>Translated_773_residues
MASYTRRAHSGGNGPALRQPRTAQSRADHSAQEGPYTPQESRSRHASHKASNSHRAPNRKKNTGKGKHRVLKWVLGIFFS
LIGLGVLAGIAVFAYLYTTTEVPQPEKFALAEKTTVYYADGTTAIGSYAEQNRSIISCEGLPDYIGNAIVASENRTFYTD
KGLDLKGIARAFINNVTKGTRQGGSTITQQYAERYYMGETTSYVGKAREAIMALKIAQTESKDEVLCNYMNTIYLGRNSY
GIQEAAKAYFNKDAKDLTLSEAAMIAGIIPSPSTWDPADNADMAKSRFKRVLNIMQEDGYITARQHTDAKFPQTAAVAQQ
NEYAGPNGYLLDMVCRELVQSKAFTKEDLDTGGYKIISTIDKGKQDLMQSIGDTRLNDMPESLQIGGIALNPKNGEVLSV
YAGSDYLSKQLNNADQALFEPGSTMKPFALLGAAQSGVSFDTLFNGNSHQHFTGLDQEVNNALENNWGSINLYQATANSV
NTVFMNVNEHLTPKRTADIAHEAGIQGDIDEASMYNVLGINALTVWDLAQGHSTIANNGVRNTLHMVSKVLDSHNKDMYN
APSEGTKVFDANDCALVQKAMQGTTTYGTAAGTSAKLGRPIAGKSGTANDELASSFVGYAPSMMNVWAIWNPDGNGNPQV
VPAFSGYGISSTGYPAHLFQEFMAQALQGTAVEQFPTAKDNGKIGGPDGTWGLARGQSGVQPYVNNQSNANRQSTEDAQK
QAEQDAQQKAAEEEAKKRQQAQEFAQQCLANPSYSTECPNYPGNTGADNENKR
>Mature_772_residues
ASYTRRAHSGGNGPALRQPRTAQSRADHSAQEGPYTPQESRSRHASHKASNSHRAPNRKKNTGKGKHRVLKWVLGIFFSL
IGLGVLAGIAVFAYLYTTTEVPQPEKFALAEKTTVYYADGTTAIGSYAEQNRSIISCEGLPDYIGNAIVASENRTFYTDK
GLDLKGIARAFINNVTKGTRQGGSTITQQYAERYYMGETTSYVGKAREAIMALKIAQTESKDEVLCNYMNTIYLGRNSYG
IQEAAKAYFNKDAKDLTLSEAAMIAGIIPSPSTWDPADNADMAKSRFKRVLNIMQEDGYITARQHTDAKFPQTAAVAQQN
EYAGPNGYLLDMVCRELVQSKAFTKEDLDTGGYKIISTIDKGKQDLMQSIGDTRLNDMPESLQIGGIALNPKNGEVLSVY
AGSDYLSKQLNNADQALFEPGSTMKPFALLGAAQSGVSFDTLFNGNSHQHFTGLDQEVNNALENNWGSINLYQATANSVN
TVFMNVNEHLTPKRTADIAHEAGIQGDIDEASMYNVLGINALTVWDLAQGHSTIANNGVRNTLHMVSKVLDSHNKDMYNA
PSEGTKVFDANDCALVQKAMQGTTTYGTAAGTSAKLGRPIAGKSGTANDELASSFVGYAPSMMNVWAIWNPDGNGNPQVV
PAFSGYGISSTGYPAHLFQEFMAQALQGTAVEQFPTAKDNGKIGGPDGTWGLARGQSGVQPYVNNQSNANRQSTEDAQKQ
AEQDAQQKAAEEEAKKRQQAQEFAQQCLANPSYSTECPNYPGNTGADNENKR

Specific function: Involved in the polymerization and cross-linking of spore peptidoglycan. May be required for synthesis of the spore germ cell wall, the first layer of peptidoglycan synthesized on the surface of the inner forespore membrane [H]

COG id: COG0744

COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transpeptidase family [H]

Homologues:

Organism=Escherichia coli, GI87082258, Length=300, Percent_Identity=33.3333333333333, Blast_Score=150, Evalue=3e-37,
Organism=Escherichia coli, GI1786343, Length=513, Percent_Identity=26.7056530214425, Blast_Score=140, Evalue=3e-34,
Organism=Escherichia coli, GI1789601, Length=227, Percent_Identity=28.1938325991189, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788867, Length=443, Percent_Identity=24.8306997742664, Blast_Score=93, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001264
- InterPro:   IPR011816
- InterPro:   IPR001460 [H]

Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]

EC number: 2.4.2.-; 3.4.-.- [C]

Molecular weight: Translated: 83760; Mature: 83629

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYTRRAHSGGNGPALRQPRTAQSRADHSAQEGPYTPQESRSRHASHKASNSHRAPNRK
CCCCCCHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
KNTGKGKHRVLKWVLGIFFSLIGLGVLAGIAVFAYLYTTTEVPQPEKFALAEKTTVYYAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCEEEEEC
GTTAIGSYAEQNRSIISCEGLPDYIGNAIVASENRTFYTDKGLDLKGIARAFINNVTKGT
CCHHHHHHHHHCCCEEEECCCHHHHCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHH
RQGGSTITQQYAERYYMGETTSYVGKAREAIMALKIAQTESKDEVLCNYMNTIYLGRNSY
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCC
GIQEAAKAYFNKDAKDLTLSEAAMIAGIIPSPSTWDPADNADMAKSRFKRVLNIMQEDGY
CHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCE
ITARQHTDAKFPQTAAVAQQNEYAGPNGYLLDMVCRELVQSKAFTKEDLDTGGYKIISTI
EEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCEEEEHHH
DKGKQDLMQSIGDTRLNDMPESLQIGGIALNPKNGEVLSVYAGSDYLSKQLNNADQALFE
HHHHHHHHHHHCCCHHHCCCCCEEECCEEECCCCCCEEEEEECCHHHHHHHCCHHHHHHC
PGSTMKPFALLGAAQSGVSFDTLFNGNSHQHFTGLDQEVNNALENNWGSINLYQATANSV
CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCC
NTVFMNVNEHLTPKRTADIAHEAGIQGDIDEASMYNVLGINALTVWDLAQGHSTIANNGV
EEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEHHHHCCCHHHHCCCH
RNTLHMVSKVLDSHNKDMYNAPSEGTKVFDANDCALVQKAMQGTTTYGTAAGTSAKLGRP
HHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCHHCCCC
IAGKSGTANDELASSFVGYAPSMMNVWAIWNPDGNGNPQVVPAFSGYGISSTGYPAHLFQ
CCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHH
EFMAQALQGTAVEQFPTAKDNGKIGGPDGTWGLARGQSGVQPYVNNQSNANRQSTEDAQK
HHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
QAEQDAQQKAAEEEAKKRQQAQEFAQQCLANPSYSTECPNYPGNTGADNENKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASYTRRAHSGGNGPALRQPRTAQSRADHSAQEGPYTPQESRSRHASHKASNSHRAPNRK
CCCCCHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
KNTGKGKHRVLKWVLGIFFSLIGLGVLAGIAVFAYLYTTTEVPQPEKFALAEKTTVYYAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCEEEEEC
GTTAIGSYAEQNRSIISCEGLPDYIGNAIVASENRTFYTDKGLDLKGIARAFINNVTKGT
CCHHHHHHHHHCCCEEEECCCHHHHCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHH
RQGGSTITQQYAERYYMGETTSYVGKAREAIMALKIAQTESKDEVLCNYMNTIYLGRNSY
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCC
GIQEAAKAYFNKDAKDLTLSEAAMIAGIIPSPSTWDPADNADMAKSRFKRVLNIMQEDGY
CHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCE
ITARQHTDAKFPQTAAVAQQNEYAGPNGYLLDMVCRELVQSKAFTKEDLDTGGYKIISTI
EEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCEEEEHHH
DKGKQDLMQSIGDTRLNDMPESLQIGGIALNPKNGEVLSVYAGSDYLSKQLNNADQALFE
HHHHHHHHHHHCCCHHHCCCCCEEECCEEECCCCCCEEEEEECCHHHHHHHCCHHHHHHC
PGSTMKPFALLGAAQSGVSFDTLFNGNSHQHFTGLDQEVNNALENNWGSINLYQATANSV
CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCC
NTVFMNVNEHLTPKRTADIAHEAGIQGDIDEASMYNVLGINALTVWDLAQGHSTIANNGV
EEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEHHHHCCCHHHHCCCH
RNTLHMVSKVLDSHNKDMYNAPSEGTKVFDANDCALVQKAMQGTTTYGTAAGTSAKLGRP
HHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCHHCCCC
IAGKSGTANDELASSFVGYAPSMMNVWAIWNPDGNGNPQVVPAFSGYGISSTGYPAHLFQ
CCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHH
EFMAQALQGTAVEQFPTAKDNGKIGGPDGTWGLARGQSGVQPYVNNQSNANRQSTEDAQK
HHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
QAEQDAQQKAAEEEAKKRQQAQEFAQQCLANPSYSTECPNYPGNTGADNENKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]