| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is purR [H]
Identifier: 213691097
GI number: 213691097
Start: 210203
End: 210832
Strand: Reverse
Name: purR [H]
Synonym: Blon_0176
Alternate gene names: 213691097
Gene position: 210832-210203 (Counterclockwise)
Preceding gene: 213691098
Following gene: 213691092
Centisome position: 7.44
GC content: 60.48
Gene sequence:
>630_bases ATGACCGCGAACGAGCCAGCGGAATCATCATCCGCCTCAATCGTCAATGTTGCCGCCATCGCGAATGTTTCCACGGCCAC GGTATCCCGTGTGCTTTCCGGCAAACGCACCAAGGACGACGACATCGCCCGCCGCGTGCGAGCCGCGGCTCACAGCCTCA ATTATTCGGTGAATTTTGCGGCCAGTGCGCTGCGTTCCACTGTGACGAGAACCATCGGCCTGATTGTGCCGAGCGTTCAG GATCCGTTCAGCGCACGGCTCATCGATACGCTTGAGCCGCTGGTCAACAGGAGCGGCCGGCAATTAGCGCTGAGCGTCGG CAGAACGCCGGAAGTGCAGAAGGAACGCATTGTGTTGATGGCCGCGCGCCATGTGGATGGACTGATTGTCGTGCCACTGC CCGGCATTGATTTGGGCGATGTGCTGGCGCAATATGCGCAGGAGATTCCTGCCGTGCAAATCGGAGGGTTGCAGCACACC ACGTTCACGCCTGACTCCGAGCCGGTTCAGCCCGGCCTGCAACAGATTGCCGACGAGCTGCTGCGGCTGCTTGCCGATCA ATCCAGCACCCCAGTACATGTCAACTTGCCTTCGCGCCTGATTGCTCCGGACTCGCAGGACGCCGAATAA
Upstream 100 bases:
>100_bases CCAAACGGCCGCCCCGCCTGTCCGGGCGGCCGTCTTTTGTTCTATAGTGATTGCCGGTAATTTCACCGAGCCGGCTTGCT TTCTGGGAGAGGAGGCACAC
Downstream 100 bases:
>100_bases ATCGGGCGGCGGGAAGAACCTTACGGAATCAGCGCGCAGAACAGCGATTCAAACACCAGCAACGGGTTGCCATTGCCGGC AAGCCGCTTGCGGGTGTGCG
Product: regulatory protein, LacI
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTANEPAESSSASIVNVAAIANVSTATVSRVLSGKRTKDDDIARRVRAAAHSLNYSVNFAASALRSTVTRTIGLIVPSVQ DPFSARLIDTLEPLVNRSGRQLALSVGRTPEVQKERIVLMAARHVDGLIVVPLPGIDLGDVLAQYAQEIPAVQIGGLQHT TFTPDSEPVQPGLQQIADELLRLLADQSSTPVHVNLPSRLIAPDSQDAE
Sequences:
>Translated_209_residues MTANEPAESSSASIVNVAAIANVSTATVSRVLSGKRTKDDDIARRVRAAAHSLNYSVNFAASALRSTVTRTIGLIVPSVQ DPFSARLIDTLEPLVNRSGRQLALSVGRTPEVQKERIVLMAARHVDGLIVVPLPGIDLGDVLAQYAQEIPAVQIGGLQHT TFTPDSEPVQPGLQQIADELLRLLADQSSTPVHVNLPSRLIAPDSQDAE >Mature_208_residues TANEPAESSSASIVNVAAIANVSTATVSRVLSGKRTKDDDIARRVRAAAHSLNYSVNFAASALRSTVTRTIGLIVPSVQD PFSARLIDTLEPLVNRSGRQLALSVGRTPEVQKERIVLMAARHVDGLIVVPLPGIDLGDVLAQYAQEIPAVQIGGLQHTT FTPDSEPVQPGLQQIADELLRLLADQSSTPVHVNLPSRLIAPDSQDAE
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787948, Length=121, Percent_Identity=34.7107438016529, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1787906, Length=175, Percent_Identity=33.1428571428571, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1789202, Length=136, Percent_Identity=32.3529411764706, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1790194, Length=121, Percent_Identity=31.404958677686, Blast_Score=60, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 22223; Mature: 22092
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANEPAESSSASIVNVAAIANVSTATVSRVLSGKRTKDDDIARRVRAAAHSLNYSVNFA CCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH ASALRSTVTRTIGLIVPSVQDPFSARLIDTLEPLVNRSGRQLALSVGRTPEVQKERIVLM HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHEE AARHVDGLIVVPLPGIDLGDVLAQYAQEIPAVQIGGLQHTTFTPDSEPVQPGLQQIADEL EECCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCEEECCCCCCCCCCHHHHHHHHHHH LRLLADQSSTPVHVNLPSRLIAPDSQDAE HHHHHCCCCCCEEEECCCCEECCCCCCCC >Mature Secondary Structure TANEPAESSSASIVNVAAIANVSTATVSRVLSGKRTKDDDIARRVRAAAHSLNYSVNFA CCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH ASALRSTVTRTIGLIVPSVQDPFSARLIDTLEPLVNRSGRQLALSVGRTPEVQKERIVLM HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHEE AARHVDGLIVVPLPGIDLGDVLAQYAQEIPAVQIGGLQHTTFTPDSEPVQPGLQQIADEL EECCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCEEECCCCCCCCCCHHHHHHHHHHH LRLLADQSSTPVHVNLPSRLIAPDSQDAE HHHHHCCCCCCEEEECCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA