| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691088
Identifier: 213691088
GI number: 213691088
Start: 196062
End: 196682
Strand: Direct
Name: 213691088
Synonym: Blon_0167
Alternate gene names: NA
Gene position: 196062-196682 (Clockwise)
Preceding gene: 213691086
Following gene: 213691091
Centisome position: 6.92
GC content: 62.48
Gene sequence:
>621_bases ATGTCTATCGCATCAGTAGAGGCGCAAAAGCAACTCGATCGTATCGTGGCTCTCGGCTACCCGGACGTGGCGGATATGAG TGCCGCCGCATTCCGCGCGCTTGCCGAGCCGCTCATCGGCGCGCTCGAGCATTCCGATCTCGGCTCGAACATCCTACTGG TGCCTACGCGCGAGCTAGTCTCGCCCGAATCGCTGATTGCGCGAACCTCCATCAACCGCATGGCCGGCTTTACCACCATG CCTCCGCGAGACATCGCCAGCTTCCTGCCGCAGGACGGATTCATGCCGCCCGAAGGCCCGTTCTATCTGGTGGTCGATCC GCATACCGGCACCTGCTACATCAACCGCGAGCCCGACGTGGCCCGCAAGCTGATTGATTCCGACGAGCGTCTGCCGCTCA CCCTCGAAGAAGGCTTGGCCATCGCCACCCAGCACCCTGAATGGCTGTTGGAAAAGAACGGTTTCAACCTGCTCGGCTCA CGCTCCACAGACGGCCGTGTGCCGAGCATCTGGATGAGCCAGAACGCACCGCGACTGGGAGCCGTCTGGCCCAATTCCCG CCATACCTGGCTGGGCAACGCGTATTGCACGGCCCGTCGCGGGGTGAGCCTGTTTAAGTAG
Upstream 100 bases:
>100_bases GGCGCACCCCATGGCGTACCCCGCGCCGCGCAGTCCGATATCCTCTCCATAACTGGCAAAGTGACTAGCGAAGAGACGGC AGTGTTCTACACTGGTAGCC
Downstream 100 bases:
>100_bases GTTTAGCGCGCGGCCTTGATCAGCGAACGGATGATGGCTATAAAGCCAAGGCTCATCGCGCCGGCCACCACGGCGAACAC CTGCGGGCGGCGCAGCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSIASVEAQKQLDRIVALGYPDVADMSAAAFRALAEPLIGALEHSDLGSNILLVPTRELVSPESLIARTSINRMAGFTTM PPRDIASFLPQDGFMPPEGPFYLVVDPHTGTCYINREPDVARKLIDSDERLPLTLEEGLAIATQHPEWLLEKNGFNLLGS RSTDGRVPSIWMSQNAPRLGAVWPNSRHTWLGNAYCTARRGVSLFK
Sequences:
>Translated_206_residues MSIASVEAQKQLDRIVALGYPDVADMSAAAFRALAEPLIGALEHSDLGSNILLVPTRELVSPESLIARTSINRMAGFTTM PPRDIASFLPQDGFMPPEGPFYLVVDPHTGTCYINREPDVARKLIDSDERLPLTLEEGLAIATQHPEWLLEKNGFNLLGS RSTDGRVPSIWMSQNAPRLGAVWPNSRHTWLGNAYCTARRGVSLFK >Mature_205_residues SIASVEAQKQLDRIVALGYPDVADMSAAAFRALAEPLIGALEHSDLGSNILLVPTRELVSPESLIARTSINRMAGFTTMP PRDIASFLPQDGFMPPEGPFYLVVDPHTGTCYINREPDVARKLIDSDERLPLTLEEGLAIATQHPEWLLEKNGFNLLGSR STDGRVPSIWMSQNAPRLGAVWPNSRHTWLGNAYCTARRGVSLFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22640; Mature: 22509
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIASVEAQKQLDRIVALGYPDVADMSAAAFRALAEPLIGALEHSDLGSNILLVPTRELV CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHC SPESLIARTSINRMAGFTTMPPRDIASFLPQDGFMPPEGPFYLVVDPHTGTCYINREPDV CHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCHHH ARKLIDSDERLPLTLEEGLAIATQHPEWLLEKNGFNLLGSRSTDGRVPSIWMSQNAPRLG HHHHHCCCCCCCEEHHCCEEEEECCCHHEEECCCCEEEECCCCCCCCCEEEECCCCCEEE AVWPNSRHTWLGNAYCTARRGVSLFK EECCCCCCEECCCCEEHHHCCCCCCC >Mature Secondary Structure SIASVEAQKQLDRIVALGYPDVADMSAAAFRALAEPLIGALEHSDLGSNILLVPTRELV CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHC SPESLIARTSINRMAGFTTMPPRDIASFLPQDGFMPPEGPFYLVVDPHTGTCYINREPDV CHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCHHH ARKLIDSDERLPLTLEEGLAIATQHPEWLLEKNGFNLLGSRSTDGRVPSIWMSQNAPRLG HHHHHCCCCCCCEEHHCCEEEEECCCHHEEECCCCEEEECCCCCCCCCEEEECCCCCEEE AVWPNSRHTWLGNAYCTARRGVSLFK EECCCCCCEECCCCEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA