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The map label for this gene is yqfA [C]

Identifier: 213691016

GI number: 213691016

Start: 113464

End: 114306

Strand: Reverse

Name: yqfA [C]

Synonym: Blon_0094

Alternate gene names: 213691016

Gene position: 114306-113464 (Counterclockwise)

Preceding gene: 213691020

Following gene: 213691014

Centisome position: 4.04

GC content: 65.01

Gene sequence:

>843_bases
ATGAGCGCTCCCACCGGCACGGCACGGGCGGCGTCCCCCGCCGCGACGACCACGCCTCCGCACACCGGCGACCGGATGGA
CGATGCCGTCGCCGCACTGAATCGCGCGTCGGCGCGATACCGGGCCGCGCAGTCGCACTACCGCCAAGCCAAGGCAGCAC
TGAAAACGGTCAGACGCCGCATCGTCCCCGTGGACGCATTCGGCAATCGCAAACCCCGACTGCGTGGATGGCTGCACCTC
GCCACCCTACCGTTGTGCATCGCGGCGTCCATCGTGCTGATCTGCATCGCACCGTCCGGCCCTGTCAAAGCGGCGTGCGC
GGTGTACGGCGCATCGGCCATGCTGCTGTTCGGCAACAGCTCGCTCCTGCACGTCGTGCCGTGGCGAAGCACGGCGGTGA
CCCGTGTGCTGTGCGGCATCGACTATTCGAATATCTTCCTCATTATCGCAGGCACCAACACACCCGTGCTTTTCGCGCTC
GACCCGGCGATTCGCCGGCCATATCTCACGGTAATCTGGACGACCGCGGCGATTGGCACGATACTGCATATCGTCTGGCT
GCGGACGCCGAACTGGGTGTTCACCACCGTATACGTCGTGTTGGGACTGGCCCCGGTAACGCTTATTCCGCAGCTCTGGA
CGGCTCCCGCAGTAGGCCCCGCGCCAACCATACTCATCGCATGCGGAGGGGCCGCATACATCGCCGGCGCCGTGTGCTTC
GCGTTGCGCAGACCCAACCCCGTGCCCGGCTGGTTCGAGTTCCATGAAGTGTTCCACTTGGGCACGGTCATCGGGTACGC
CTGCCACATCGTGGCGATCTACCTGATCGTCTGCGCGTTATAA

Upstream 100 bases:

>100_bases
GATTGCCGTTGCCGACCTTGACTGCCGCGCCGCCCCGTACTACGTTACGGTAACGTAAGTTAGCGGCCGGAAACGCGCCG
GCCACAGCGAGGTGATCGAT

Downstream 100 bases:

>100_bases
TCCGCGCGACCTCCGCGCAGCCCGTTCAAATCCTCAGGCACGCCGTGAAATCTGCACGGCGGTGCCGGATGCGGTGACCA
TAAGCATGCCGTTGTCGGCG

Product: Hly-III family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSAPTGTARAASPAATTTPPHTGDRMDDAVAALNRASARYRAAQSHYRQAKAALKTVRRRIVPVDAFGNRKPRLRGWLHL
ATLPLCIAASIVLICIAPSGPVKAACAVYGASAMLLFGNSSLLHVVPWRSTAVTRVLCGIDYSNIFLIIAGTNTPVLFAL
DPAIRRPYLTVIWTTAAIGTILHIVWLRTPNWVFTTVYVVLGLAPVTLIPQLWTAPAVGPAPTILIACGGAAYIAGAVCF
ALRRPNPVPGWFEFHEVFHLGTVIGYACHIVAIYLIVCAL

Sequences:

>Translated_280_residues
MSAPTGTARAASPAATTTPPHTGDRMDDAVAALNRASARYRAAQSHYRQAKAALKTVRRRIVPVDAFGNRKPRLRGWLHL
ATLPLCIAASIVLICIAPSGPVKAACAVYGASAMLLFGNSSLLHVVPWRSTAVTRVLCGIDYSNIFLIIAGTNTPVLFAL
DPAIRRPYLTVIWTTAAIGTILHIVWLRTPNWVFTTVYVVLGLAPVTLIPQLWTAPAVGPAPTILIACGGAAYIAGAVCF
ALRRPNPVPGWFEFHEVFHLGTVIGYACHIVAIYLIVCAL
>Mature_279_residues
SAPTGTARAASPAATTTPPHTGDRMDDAVAALNRASARYRAAQSHYRQAKAALKTVRRRIVPVDAFGNRKPRLRGWLHLA
TLPLCIAASIVLICIAPSGPVKAACAVYGASAMLLFGNSSLLHVVPWRSTAVTRVLCGIDYSNIFLIIAGTNTPVLFALD
PAIRRPYLTVIWTTAAIGTILHIVWLRTPNWVFTTVYVVLGLAPVTLIPQLWTAPAVGPAPTILIACGGAAYIAGAVCFA
LRRPNPVPGWFEFHEVFHLGTVIGYACHIVAIYLIVCAL

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=172, Percent_Identity=29.6511627906977, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 29924; Mature: 29792

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPTGTARAASPAATTTPPHTGDRMDDAVAALNRASARYRAAQSHYRQAKAALKTVRRR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVPVDAFGNRKPRLRGWLHLATLPLCIAASIVLICIAPSGPVKAACAVYGASAMLLFGNS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCEEEEEECCC
SLLHVVPWRSTAVTRVLCGIDYSNIFLIIAGTNTPVLFALDPAIRRPYLTVIWTTAAIGT
CEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECHHHHCCEEEEEEHHHHHHH
ILHIVWLRTPNWVFTTVYVVLGLAPVTLIPQLWTAPAVGPAPTILIACGGAAYIAGAVCF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHH
ALRRPNPVPGWFEFHEVFHLGTVIGYACHIVAIYLIVCAL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAPTGTARAASPAATTTPPHTGDRMDDAVAALNRASARYRAAQSHYRQAKAALKTVRRR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVPVDAFGNRKPRLRGWLHLATLPLCIAASIVLICIAPSGPVKAACAVYGASAMLLFGNS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCEEEEEECCC
SLLHVVPWRSTAVTRVLCGIDYSNIFLIIAGTNTPVLFALDPAIRRPYLTVIWTTAAIGT
CEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECHHHHCCEEEEEEHHHHHHH
ILHIVWLRTPNWVFTTVYVVLGLAPVTLIPQLWTAPAVGPAPTILIACGGAAYIAGAVCF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHH
ALRRPNPVPGWFEFHEVFHLGTVIGYACHIVAIYLIVCAL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]