| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is ngoFVIIM [H]
Identifier: 213691014
GI number: 213691014
Start: 111635
End: 112807
Strand: Reverse
Name: ngoFVIIM [H]
Synonym: Blon_0092
Alternate gene names: 213691014
Gene position: 112807-111635 (Counterclockwise)
Preceding gene: 213691016
Following gene: 213691013
Centisome position: 3.98
GC content: 55.75
Gene sequence:
>1173_bases ATGACTGGTGCATCCAGCGGGGCTACCCGTATCGGCTCAACCGCACCACAAGCGCTTGAGTTCTTTGCCGGCATAGGGCT TGCCCGCCTAGGCCTCGAAGAGGCTGGCTTCCACGTGGCGTGGTCGAACGATATAGATCACGCCAAATGCCAGATGTATA GGAACCAGTTCGGCAACAATGAGCAGGAACATACCCTGATCGAGGGGGACATGGGTGAGCTACATGGCTCTGACTTGCCT CACAATATCTCCATTGCTTGGGGCTCCTCCCCTTGTACCGATATATCTCTGGCTGGAACCCGTACAGGGTTGAACGGCAA ACAGTCCAGCGCTTTCTGGCAGTATATCCGCCTCCTGGAAGAGATGGGCAACAATAGGCCACCTGTAGCCGTACTTGAGA ATGTCGCAGGTCTTGCTACGTCTCACTCAGGCGAGGATATAGCAGCAGCAGTAAGCGCATTCAACCAACTGGGATATTCA GTTGACGCGCTGTCAATCGACGCTCGGCGTTTTGTGCCCCAGTCCCGCCCCAGACTGTTCTTGGTCGGCCTAACCAATCC TCCTGAGGGCTCGCAAGCCAATTCCCCACTACGGCCAGATTGGTTGCAACAGGTGTTTGCCGATACCTCCCTGCGTATGC ACAGGGCAGTTCTGCCGGAACCGCCGGAACCACTTATGGCGGGCTTTGGCATGTACGCCGAAGAGATGTCAGACGATGAT TCCCGATGGTGGCCTAAGGGCAAGCTAACGGCATTTCTTGACTCACTGTCCGCTGTGCAATCAGAGAGAGTGATGAAGCT GAAGGACAATCCGTTCATCTCTTATCGAACGGCATACAGGCGCACTCGGAACGGGAAACCCACGTGGGAAGTCCGAGCGG ATGACATTTCGGGATGTCTACGAACAGCTCGCGGGGGTTCTTCAAGACAAGCCGTGGTACGACTCGGCAAGGGGTCGACG GCAGTGCGCTGGATGACTCCAAAGGAGTACGCGGCACTTATGGGCGCATCTCATTACAACCTTAATGGTCTGCGCACCAA CCAAGCCTTGTTCGGCTTCGGTGACGCAGTGGCAGTACCTGTAGTCGAATGGCTTGGCGAGCACTACTTCATGCCAGCAC TTCGCGGTACATTGGACAAGGCAAAGCAGCAACACGAGCTACGGTCAGCTTGA
Upstream 100 bases:
>100_bases TCATAGGAGGAGCGCGCCACAGCGAATACGCATACGATTTCATAGCAAGCAGCACGTACACTAGTACCAGTGAATGTCAG AAATCGGAAAGGAACAGGGC
Downstream 100 bases:
>100_bases TAGTCGTCGAAGGAGAGCGAGCATGGGTATTGACGCCATCGAGGAGTTTCGAAAGAGCCACGGCATTAACACCAAAGGCA ACCTAGCCGGCATACTGCAG
Product: DNA-cytosine methyltransferase
Products: NA
Alternate protein names: M.NgoFVII; Cytosine-specific methyltransferase NgoFVII; M.NgoVII [H]
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTGASSGATRIGSTAPQALEFFAGIGLARLGLEEAGFHVAWSNDIDHAKCQMYRNQFGNNEQEHTLIEGDMGELHGSDLP HNISIAWGSSPCTDISLAGTRTGLNGKQSSAFWQYIRLLEEMGNNRPPVAVLENVAGLATSHSGEDIAAAVSAFNQLGYS VDALSIDARRFVPQSRPRLFLVGLTNPPEGSQANSPLRPDWLQQVFADTSLRMHRAVLPEPPEPLMAGFGMYAEEMSDDD SRWWPKGKLTAFLDSLSAVQSERVMKLKDNPFISYRTAYRRTRNGKPTWEVRADDISGCLRTARGGSSRQAVVRLGKGST AVRWMTPKEYAALMGASHYNLNGLRTNQALFGFGDAVAVPVVEWLGEHYFMPALRGTLDKAKQQHELRSA
Sequences:
>Translated_390_residues MTGASSGATRIGSTAPQALEFFAGIGLARLGLEEAGFHVAWSNDIDHAKCQMYRNQFGNNEQEHTLIEGDMGELHGSDLP HNISIAWGSSPCTDISLAGTRTGLNGKQSSAFWQYIRLLEEMGNNRPPVAVLENVAGLATSHSGEDIAAAVSAFNQLGYS VDALSIDARRFVPQSRPRLFLVGLTNPPEGSQANSPLRPDWLQQVFADTSLRMHRAVLPEPPEPLMAGFGMYAEEMSDDD SRWWPKGKLTAFLDSLSAVQSERVMKLKDNPFISYRTAYRRTRNGKPTWEVRADDISGCLRTARGGSSRQAVVRLGKGST AVRWMTPKEYAALMGASHYNLNGLRTNQALFGFGDAVAVPVVEWLGEHYFMPALRGTLDKAKQQHELRSA >Mature_389_residues TGASSGATRIGSTAPQALEFFAGIGLARLGLEEAGFHVAWSNDIDHAKCQMYRNQFGNNEQEHTLIEGDMGELHGSDLPH NISIAWGSSPCTDISLAGTRTGLNGKQSSAFWQYIRLLEEMGNNRPPVAVLENVAGLATSHSGEDIAAAVSAFNQLGYSV DALSIDARRFVPQSRPRLFLVGLTNPPEGSQANSPLRPDWLQQVFADTSLRMHRAVLPEPPEPLMAGFGMYAEEMSDDDS RWWPKGKLTAFLDSLSAVQSERVMKLKDNPFISYRTAYRRTRNGKPTWEVRADDISGCLRTARGGSSRQAVVRLGKGSTA VRWMTPKEYAALMGASHYNLNGLRTNQALFGFGDAVAVPVVEWLGEHYFMPALRGTLDKAKQQHELRSA
Specific function: This methylase recognizes the double-stranded sequence GCSGC, causes specific methylation on C-? on both strands, and protects the DNA from cleavage by the NgoFVII endonuclease [H]
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018117 - InterPro: IPR001525 [H]
Pfam domain/function: PF00145 DNA_methylase [H]
EC number: =2.1.1.37 [H]
Molecular weight: Translated: 42740; Mature: 42608
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGASSGATRIGSTAPQALEFFAGIGLARLGLEEAGFHVAWSNDIDHAKCQMYRNQFGNN CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCHHHCCEEEEECCCCCHHHHHHHHHHHCCC EQEHTLIEGDMGELHGSDLPHNISIAWGSSPCTDISLAGTRTGLNGKQSSAFWQYIRLLE CCCCEEEECCCHHCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH EMGNNRPPVAVLENVAGLATSHSGEDIAAAVSAFNQLGYSVDALSIDARRFVPQSRPRLF HHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEECHHHCCCCCCCCEE LVGLTNPPEGSQANSPLRPDWLQQVFADTSLRMHRAVLPEPPEPLMAGFGMYAEEMSDDD EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC SRWWPKGKLTAFLDSLSAVQSERVMKLKDNPFISYRTAYRRTRNGKPTWEVRADDISGCL CCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHCCCCCCCEEEECHHHHHHH RTARGGSSRQAVVRLGKGSTAVRWMTPKEYAALMGASHYNLNGLRTNQALFGFGDAVAVP HHHCCCCCCEEEEEECCCCCEEEEECHHHHHHHHCCCCCCCCCEECCCHHHCCCCHHHHH VVEWLGEHYFMPALRGTLDKAKQQHELRSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGASSGATRIGSTAPQALEFFAGIGLARLGLEEAGFHVAWSNDIDHAKCQMYRNQFGNN CCCCCCCCCCCCCCHHHHHHHHHCCHHHHCHHHCCEEEEECCCCCHHHHHHHHHHHCCC EQEHTLIEGDMGELHGSDLPHNISIAWGSSPCTDISLAGTRTGLNGKQSSAFWQYIRLLE CCCCEEEECCCHHCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH EMGNNRPPVAVLENVAGLATSHSGEDIAAAVSAFNQLGYSVDALSIDARRFVPQSRPRLF HHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEECHHHCCCCCCCCEE LVGLTNPPEGSQANSPLRPDWLQQVFADTSLRMHRAVLPEPPEPLMAGFGMYAEEMSDDD EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC SRWWPKGKLTAFLDSLSAVQSERVMKLKDNPFISYRTAYRRTRNGKPTWEVRADDISGCL CCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHCCCCCCCEEEECHHHHHHH RTARGGSSRQAVVRLGKGSTAVRWMTPKEYAALMGASHYNLNGLRTNQALFGFGDAVAVP HHHCCCCCCEEEEEECCCCCEEEEECHHHHHHHHCCCCCCCCCEECCCHHHCCCCHHHHH VVEWLGEHYFMPALRGTLDKAKQQHELRSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7607490 [H]