| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691020
Identifier: 213691020
GI number: 213691020
Start: 116467
End: 116814
Strand: Reverse
Name: 213691020
Synonym: Blon_0098
Alternate gene names: NA
Gene position: 116814-116467 (Counterclockwise)
Preceding gene: 213691021
Following gene: 213691016
Centisome position: 4.12
GC content: 59.48
Gene sequence:
>348_bases ATGAAGCCCTATGACGTGTGGCTGATGTGGGTCGAGTTCCCCGACCATCCGGGCGTCGGCAAAGTCCGGCCGGTGGTCGT CACCGAAGTCGGCGACGACGGTGTATCGGGCGTGATCGTCAAAGTCACTGGCAACATCAACTGGAACGAGCCGGGCGACA TTGTTCTTGCCGACTGGCAGCAGGCCGGTTTGTTGAAGCCATCGCTCGTCCGTTGCGGGCAGCGTTACGAGTTCCTGCCC GGTGATCTATACAAGTGGTTTGGTTCGCTGTCCAATAGTGACGCGGCCAAAGTCGCCGACGGCTTGGAATTGACCAGCGA CTCGTTGCCCTACAAGCGCACCAGATAG
Upstream 100 bases:
>100_bases GTGAACACGGTGCGCAGGTTCGAGCGTTCCGCATCGGGGCGTGCGATCATGCCGGCCGATTGGGACGACCCGGAAGATGA CATCTATGACAACCTCTGAT
Downstream 100 bases:
>100_bases AATTCATATCCCACTCATCTGTTGCACGACGACCAGCCAGCCGAAGGGAGGGCCGTATAATCCTGTCAGGCATATGGCGG CCGTGGCATCGGCGCATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MKPYDVWLMWVEFPDHPGVGKVRPVVVTEVGDDGVSGVIVKVTGNINWNEPGDIVLADWQQAGLLKPSLVRCGQRYEFLP GDLYKWFGSLSNSDAAKVADGLELTSDSLPYKRTR
Sequences:
>Translated_115_residues MKPYDVWLMWVEFPDHPGVGKVRPVVVTEVGDDGVSGVIVKVTGNINWNEPGDIVLADWQQAGLLKPSLVRCGQRYEFLP GDLYKWFGSLSNSDAAKVADGLELTSDSLPYKRTR >Mature_115_residues MKPYDVWLMWVEFPDHPGVGKVRPVVVTEVGDDGVSGVIVKVTGNINWNEPGDIVLADWQQAGLLKPSLVRCGQRYEFLP GDLYKWFGSLSNSDAAKVADGLELTSDSLPYKRTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12764; Mature: 12764
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYDVWLMWVEFPDHPGVGKVRPVVVTEVGDDGVSGVIVKVTGNINWNEPGDIVLADWQ CCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCC QAGLLKPSLVRCGQRYEFLPGDLYKWFGSLSNSDAAKVADGLELTSDSLPYKRTR CCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHCCCEECCCCCCCCCCC >Mature Secondary Structure MKPYDVWLMWVEFPDHPGVGKVRPVVVTEVGDDGVSGVIVKVTGNINWNEPGDIVLADWQ CCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCC QAGLLKPSLVRCGQRYEFLPGDLYKWFGSLSNSDAAKVADGLELTSDSLPYKRTR CCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA