| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691010
Identifier: 213691010
GI number: 213691010
Start: 105553
End: 108195
Strand: Direct
Name: 213691010
Synonym: Blon_0088
Alternate gene names: NA
Gene position: 105553-108195 (Clockwise)
Preceding gene: 213691009
Following gene: 213691011
Centisome position: 3.73
GC content: 67.2
Gene sequence:
>2643_bases ATGCCGCAGACGCGGCGGCCTCTGCGGGACGCGGAACCCTCGCGGACGAAGCCCACCACGACCTCCCGCGCCACCAAACC GCATACGGCAAGGTCCAGCCATGCGGCGGAAAGCTGGCGTGAACTGGCCGGTGACATGCGGCAGTGGGCGGACGACCACC GGCTGGCCGTCACCGCCACGGCGGCGCTGGTGGCGCTGAATTTGGCGGCGTGGCTGGTGGCCGCGATGGCCGGATTCGCG TTTCCGCTGCGGCTCAGCACCAGCATGGCCGCATTCAACGCCGGCAAACTCATCTGCTCGCTGTTCCTGGCGCGCGGCGT CATCCAACTTATGGTCGACGCCGTCCTGTGGCTCGTCATGTTGTCGATAGCCGAACCATGGCTCGGCCGTGTGCGCACCG TCGTCACCGCGCTCGCCTGCGCGGCCGGCGGCGTGCTGGCGGGCCTGACCCTGTGCGCGGCGGCCGGATGGATGTTCCAG GACTCCCTGTTCGTCTCCCGCATGCGGTTCGCATTGAGCCCGCTGGTGTTGCCGGTCGGCGCGCTCATGGCGGCCAGCGC GTTCTGCAGCCACCTATGGCGCAGGCGCATCCGACTCGTCGGCTATGTGGCGATCCTGGTCACGTTGCTCTACAGTGGCA ACCCCAGCGGCTACTGCATACTCGCCGCCGCGCTGATCGGCCATGCCGCCGGCCGTGTGATGGCCGGTCCGCCCGCGCAC GTCGAAGCCGAATGGCACTGGCTGCGCAGCACCTCCTTCGAGGCGCGACGCATATTCGCGGCCATCGCCGTGGTACTGGC CCTGGGGCCGGTCATCGCCATCACCTCCCATAACCATGCGGGCCCGCTCAGCACGATCGGCCTGCTCATGAGCCCGGTTT CCGTCGACAACGGCATGCTGGCCAAATGCCTGGCTGGTGACACGCACGGCGGATGCTTCCTGCAGTTCAATCTGCTGCGG GCCTCGATGCCCGGCGCGGTGCTGCGCTCGCTGCTGCCCACTGCCGTGACCTTGGTGCTGGCGTGGGGCCTGTATCGCGG ACGTCGGTTCGCGGCCATCTGCACCGTGGCCATCAACCTGTTCACGGTGACCATCGCCGTCGCCTACTATCTGGTCGTGC CGCTGAGCTTCGCGCCGGACGGCATGGCCTCCCTGCTGCAGCACGGCGCGATCGTCGCCTGCGTGGCGAACGTCCTGCCC CCGCTGCTGTTCGCCGTCGCCCTGCTGGCGGCAATGAAACACTTCCCGATTCGCATCGGCTGGCGCAGGCTGGTCGGCGG CATCGGCGCCATCGTGCTGGCCTGGCTGGCGTGCGCCGCCATATACCTGATATACGGTATTGCCCAACCCGCCACCTTCT CGCCACGCGCCACCGCCTCGTCGCTGCTGGCCGAACTGCCGGGCCGGTTCCTGCCCATCGGCTTTCTGAGCCATATGAAG CTGTCGTTCGTGCCGCGCACTCCAATGGCTTCGATCGTGTACCAAGGCATCGGCCTGGTGTTCTGGATCGTGGTGCTGGC CGTGGTGATCCACTGGATGGGCGACGTGAGCGAATCGAACGAGCTGGCCCGTGCGCGCGCTGAACGTCTGGTCGAAACCG GCGGCGAATCGATGAGCTTCATGACCACGTGGGAAGGCAACAGCTACTGGCTGTCCCCCACGGGCAGATCGGCCGTGGCG TATCGCGTGCTCAACGGCATCGCCCTGACCTGCACCGGACCGTTCGGCGATCCGGCGGAATGGATGGACGATCTGAACGG TTTCACCCAGTACTGCGTGGAACGTTCGCTGTCGCCGGTGTTCTACGGCGTGCATCGGGAACAGCGCGACGCGTTGCTGG AAGCCGGCTGGAACTCCATCGAGGTCGGCAGCGAGATGGTGGTCGACCCGCGCAACTGGAAGACGACCGGCAAGAAGTGG CAGGATGTGCGCACCGCCATCAACAAGGCCAAACGCGATGGCGTGAGCGACGTGCTGTCCACCTTCCTGGAAGCGTCGCT TGACGTGCGCGAGCAGATCGAGGACATTTCCGAGGAATGGGCGCAGCTCAAGGCGTTGCCGGAGATGAGGTTCACGCTCG GCGGCGTCGAGGAGCTCCGCGACCCGCGTGTGCGGCTGCTGTACGCCGTCGACGCGGACGGGCGCGTGTTGGGCGTCACC AGTTGGTTGCCGACCTGGCGCGAAGGGCGCATCGTCGGCTGGACGTTGGATTTTATGCGCCATCGCACCGACAGTCCCAA CGGCATCATGGAGTTCCTGATCGCGCGCATGGCCGAGCGTCTGCGCGACGAGGGCGAAGCCGATCCCACGCACGCCGTGG AGTTCATGAGCCTGTCCGCGGCGCCCCTGGCCGGCATGAATCCCGATCGGGACAACGCCGGGGAGGACGGGGCACCGGCC AGCGAAGGCACGCAGGTGCTCCAACACGCGCTGCAGATCGTGGCCGACTGGATGGAACCCGCCTACGGCTTCCACTCGCT GTTCAACTTCAAGCGCAAGTTCCAGCCCACCGAAGTGCCGGTCTACGTGTGCTACCCGGACCCGGCGGCGTTGCCGCAGA TCGGACTCGCCGTGGTGCGCGCCTACGTGCCCAGCGTGACGGCCGCCGAAGTGGCCGGCATGCTCAGCACGCTGCGGTCG TGA
Upstream 100 bases:
>100_bases CCGGGCTGGGCGAAATGACGAAATCGTTGGAGGAATACCCACAAGTGGAGGTGTTGCAATGAGCGAAGAACAACAGCATG GGAACGCGCGGCCGGCGGCC
Downstream 100 bases:
>100_bases AGGTGTGCAACGGGTACGCAGGTTAGCCGATTCGAGCCTGAGACGGGGTATCTGCTTTCAGAGAGGTACATTTGGCCCCT TGCGGACAACTAACTGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 880; Mature: 879
Protein sequence:
>880_residues MPQTRRPLRDAEPSRTKPTTTSRATKPHTARSSHAAESWRELAGDMRQWADDHRLAVTATAALVALNLAAWLVAAMAGFA FPLRLSTSMAAFNAGKLICSLFLARGVIQLMVDAVLWLVMLSIAEPWLGRVRTVVTALACAAGGVLAGLTLCAAAGWMFQ DSLFVSRMRFALSPLVLPVGALMAASAFCSHLWRRRIRLVGYVAILVTLLYSGNPSGYCILAAALIGHAAGRVMAGPPAH VEAEWHWLRSTSFEARRIFAAIAVVLALGPVIAITSHNHAGPLSTIGLLMSPVSVDNGMLAKCLAGDTHGGCFLQFNLLR ASMPGAVLRSLLPTAVTLVLAWGLYRGRRFAAICTVAINLFTVTIAVAYYLVVPLSFAPDGMASLLQHGAIVACVANVLP PLLFAVALLAAMKHFPIRIGWRRLVGGIGAIVLAWLACAAIYLIYGIAQPATFSPRATASSLLAELPGRFLPIGFLSHMK LSFVPRTPMASIVYQGIGLVFWIVVLAVVIHWMGDVSESNELARARAERLVETGGESMSFMTTWEGNSYWLSPTGRSAVA YRVLNGIALTCTGPFGDPAEWMDDLNGFTQYCVERSLSPVFYGVHREQRDALLEAGWNSIEVGSEMVVDPRNWKTTGKKW QDVRTAINKAKRDGVSDVLSTFLEASLDVREQIEDISEEWAQLKALPEMRFTLGGVEELRDPRVRLLYAVDADGRVLGVT SWLPTWREGRIVGWTLDFMRHRTDSPNGIMEFLIARMAERLRDEGEADPTHAVEFMSLSAAPLAGMNPDRDNAGEDGAPA SEGTQVLQHALQIVADWMEPAYGFHSLFNFKRKFQPTEVPVYVCYPDPAALPQIGLAVVRAYVPSVTAAEVAGMLSTLRS
Sequences:
>Translated_880_residues MPQTRRPLRDAEPSRTKPTTTSRATKPHTARSSHAAESWRELAGDMRQWADDHRLAVTATAALVALNLAAWLVAAMAGFA FPLRLSTSMAAFNAGKLICSLFLARGVIQLMVDAVLWLVMLSIAEPWLGRVRTVVTALACAAGGVLAGLTLCAAAGWMFQ DSLFVSRMRFALSPLVLPVGALMAASAFCSHLWRRRIRLVGYVAILVTLLYSGNPSGYCILAAALIGHAAGRVMAGPPAH VEAEWHWLRSTSFEARRIFAAIAVVLALGPVIAITSHNHAGPLSTIGLLMSPVSVDNGMLAKCLAGDTHGGCFLQFNLLR ASMPGAVLRSLLPTAVTLVLAWGLYRGRRFAAICTVAINLFTVTIAVAYYLVVPLSFAPDGMASLLQHGAIVACVANVLP PLLFAVALLAAMKHFPIRIGWRRLVGGIGAIVLAWLACAAIYLIYGIAQPATFSPRATASSLLAELPGRFLPIGFLSHMK LSFVPRTPMASIVYQGIGLVFWIVVLAVVIHWMGDVSESNELARARAERLVETGGESMSFMTTWEGNSYWLSPTGRSAVA YRVLNGIALTCTGPFGDPAEWMDDLNGFTQYCVERSLSPVFYGVHREQRDALLEAGWNSIEVGSEMVVDPRNWKTTGKKW QDVRTAINKAKRDGVSDVLSTFLEASLDVREQIEDISEEWAQLKALPEMRFTLGGVEELRDPRVRLLYAVDADGRVLGVT SWLPTWREGRIVGWTLDFMRHRTDSPNGIMEFLIARMAERLRDEGEADPTHAVEFMSLSAAPLAGMNPDRDNAGEDGAPA SEGTQVLQHALQIVADWMEPAYGFHSLFNFKRKFQPTEVPVYVCYPDPAALPQIGLAVVRAYVPSVTAAEVAGMLSTLRS >Mature_879_residues PQTRRPLRDAEPSRTKPTTTSRATKPHTARSSHAAESWRELAGDMRQWADDHRLAVTATAALVALNLAAWLVAAMAGFAF PLRLSTSMAAFNAGKLICSLFLARGVIQLMVDAVLWLVMLSIAEPWLGRVRTVVTALACAAGGVLAGLTLCAAAGWMFQD SLFVSRMRFALSPLVLPVGALMAASAFCSHLWRRRIRLVGYVAILVTLLYSGNPSGYCILAAALIGHAAGRVMAGPPAHV EAEWHWLRSTSFEARRIFAAIAVVLALGPVIAITSHNHAGPLSTIGLLMSPVSVDNGMLAKCLAGDTHGGCFLQFNLLRA SMPGAVLRSLLPTAVTLVLAWGLYRGRRFAAICTVAINLFTVTIAVAYYLVVPLSFAPDGMASLLQHGAIVACVANVLPP LLFAVALLAAMKHFPIRIGWRRLVGGIGAIVLAWLACAAIYLIYGIAQPATFSPRATASSLLAELPGRFLPIGFLSHMKL SFVPRTPMASIVYQGIGLVFWIVVLAVVIHWMGDVSESNELARARAERLVETGGESMSFMTTWEGNSYWLSPTGRSAVAY RVLNGIALTCTGPFGDPAEWMDDLNGFTQYCVERSLSPVFYGVHREQRDALLEAGWNSIEVGSEMVVDPRNWKTTGKKWQ DVRTAINKAKRDGVSDVLSTFLEASLDVREQIEDISEEWAQLKALPEMRFTLGGVEELRDPRVRLLYAVDADGRVLGVTS WLPTWREGRIVGWTLDFMRHRTDSPNGIMEFLIARMAERLRDEGEADPTHAVEFMSLSAAPLAGMNPDRDNAGEDGAPAS EGTQVLQHALQIVADWMEPAYGFHSLFNFKRKFQPTEVPVYVCYPDPAALPQIGLAVVRAYVPSVTAAEVAGMLSTLRS
Specific function: Unknown
COG id: COG2898
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95574; Mature: 95443
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQTRRPLRDAEPSRTKPTTTSRATKPHTARSSHAAESWRELAGDMRQWADDHRLAVTAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHH AALVALNLAAWLVAAMAGFAFPLRLSTSMAAFNAGKLICSLFLARGVIQLMVDAVLWLVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIAEPWLGRVRTVVTALACAAGGVLAGLTLCAAAGWMFQDSLFVSRMRFALSPLVLPVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMAASAFCSHLWRRRIRLVGYVAILVTLLYSGNPSGYCILAAALIGHAAGRVMAGPPAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC VEAEWHWLRSTSFEARRIFAAIAVVLALGPVIAITSHNHAGPLSTIGLLMSPVSVDNGML CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHH AKCLAGDTHGGCFLQFNLLRASMPGAVLRSLLPTAVTLVLAWGLYRGRRFAAICTVAINL HHHHCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FTVTIAVAYYLVVPLSFAPDGMASLLQHGAIVACVANVLPPLLFAVALLAAMKHFPIRIG HHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH WRRLVGGIGAIVLAWLACAAIYLIYGIAQPATFSPRATASSLLAELPGRFLPIGFLSHMK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEECHHHHHHCH LSFVPRTPMASIVYQGIGLVFWIVVLAVVIHWMGDVSESNELARARAERLVETGGESMSF HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEE MTTWEGNSYWLSPTGRSAVAYRVLNGIALTCTGPFGDPAEWMDDLNGFTQYCVERSLSPV EEEECCCEEEECCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHH FYGVHREQRDALLEAGWNSIEVGSEMVVDPRNWKTTGKKWQDVRTAINKAKRDGVSDVLS HHHHHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH TFLEASLDVREQIEDISEEWAQLKALPEMRFTLGGVEELRDPRVRLLYAVDADGRVLGVT HHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHCCCCEEEEEEECCCCCEEEEH SWLPTWREGRIVGWTLDFMRHRTDSPNGIMEFLIARMAERLRDEGEADPTHAVEFMSLSA HCCCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC APLAGMNPDRDNAGEDGAPASEGTQVLQHALQIVADWMEPAYGFHSLFNFKRKFQPTEVP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VYVCYPDPAALPQIGLAVVRAYVPSVTAAEVAGMLSTLRS EEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure PQTRRPLRDAEPSRTKPTTTSRATKPHTARSSHAAESWRELAGDMRQWADDHRLAVTAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHH AALVALNLAAWLVAAMAGFAFPLRLSTSMAAFNAGKLICSLFLARGVIQLMVDAVLWLVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIAEPWLGRVRTVVTALACAAGGVLAGLTLCAAAGWMFQDSLFVSRMRFALSPLVLPVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMAASAFCSHLWRRRIRLVGYVAILVTLLYSGNPSGYCILAAALIGHAAGRVMAGPPAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC VEAEWHWLRSTSFEARRIFAAIAVVLALGPVIAITSHNHAGPLSTIGLLMSPVSVDNGML CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHH AKCLAGDTHGGCFLQFNLLRASMPGAVLRSLLPTAVTLVLAWGLYRGRRFAAICTVAINL HHHHCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FTVTIAVAYYLVVPLSFAPDGMASLLQHGAIVACVANVLPPLLFAVALLAAMKHFPIRIG HHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH WRRLVGGIGAIVLAWLACAAIYLIYGIAQPATFSPRATASSLLAELPGRFLPIGFLSHMK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEECHHHHHHCH LSFVPRTPMASIVYQGIGLVFWIVVLAVVIHWMGDVSESNELARARAERLVETGGESMSF HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEE MTTWEGNSYWLSPTGRSAVAYRVLNGIALTCTGPFGDPAEWMDDLNGFTQYCVERSLSPV EEEECCCEEEECCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHH FYGVHREQRDALLEAGWNSIEVGSEMVVDPRNWKTTGKKWQDVRTAINKAKRDGVSDVLS HHHHHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH TFLEASLDVREQIEDISEEWAQLKALPEMRFTLGGVEELRDPRVRLLYAVDADGRVLGVT HHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHCCCCEEEEEEECCCCCEEEEH SWLPTWREGRIVGWTLDFMRHRTDSPNGIMEFLIARMAERLRDEGEADPTHAVEFMSLSA HCCCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC APLAGMNPDRDNAGEDGAPASEGTQVLQHALQIVADWMEPAYGFHSLFNFKRKFQPTEVP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VYVCYPDPAALPQIGLAVVRAYVPSVTAAEVAGMLSTLRS EEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12948626; 1667221 [H]