| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213690967
Identifier: 213690967
GI number: 213690967
Start: 48263
End: 49570
Strand: Direct
Name: 213690967
Synonym: Blon_0043
Alternate gene names: NA
Gene position: 48263-49570 (Clockwise)
Preceding gene: 213690966
Following gene: 213690968
Centisome position: 1.7
GC content: 57.57
Gene sequence:
>1308_bases ATGAAGATCACACGAGGCATCGCACTTGCGGCCGCGGTGGCAATGTCGCTGACCACGCTCGCTGCATGCGGCAGCGACAC CGCGCAAGATGAGGAAACGCCAGACAGCCTGTCGTTCTGGTATTACGAGGAAGACGACGCTGGCCAGACCCAGGCATGGC GTCGCGCCGCGGAAGCCTTCGAAAAGGAAACGGGTGTCAAAATCAATTTCGAACGCAAGTCGTTCACGCAGATCGCGCAG AACGGCAGCCAATTCCTCAATTCCGATGAGGCGCCGGATCTTATGGAATCCAATCGCGGCAACGGTTCGGCCGGCGTGCT CTCCACCATGGGGCTGCTCACCGATTTGGGTGATTACGTCGATCAATACGGTTGGGACAAGAAGGTGACCGGCGCCAATG CGGCCGTGGCCAAGTATGATGAAAACGGCATCATGGATGGTGACACCTGGTACGGCATGACCAGTTACGCGGAATTCCAG CGCGTCTACTACAACAAGGATCTGTTCGCCAAGTACGGGCTGGAGATTCCGACCACCTATGACGAGTTCGTGGACGTCTG CCAGAAATTCGTGGATGCCGGAGTGACGCCGATCGCCGCCGACGCGCAGGAATACGGCGTGATGTGGCTGTGGTGGCAGC TGGTTTCCAAGGAGGCCGACGCCAAATTCATCGACAACTGGCAGCTCTACAAGGGCGATGTCGACTGGAATTCCAACATT CTCACCAATTCCGTGAGCACCATCAACGACTGGCTCGACAAGGGCTTCATCTCCCGCAACGCCACCGGTATGAAGGCCGA AGACACCACGCAGGCATTCATCAAGGGGGAGTATCCGATCTATCAGACCGGCACCTGGAATCAGGGACGTTTCGTCAAGC AGATCACCACTTTCGATTGGGACGCCGCGGTGATGCCGGAATCGAATTTCGCGATTGGCTGCGCAGGCAATCTGCTGGTG ATTCCGGAACGCTCGCACCACAAGGATCTCGCTGCGAAGTTCATTGACTACGTGCTTTCCGACGATGTGCAGAACTACCT CGGCAACGCCGGCGGAATTCCGGTGGCGGGCGACGCCAGCAAGATCAACGACGAGAAGAGCAAGGCCATGATCGAGGAAT ACGCCTCCTACGCCAATGATGGCAAGCTCAGCTACTACCCGGATTACGCCGCTTCCAACCTTACCGATGCTGTTCCGGCG GAATTCCAGGAACTGGTGAACGGCACCAAGAAGCCGGCCGACGTGCTCAAGGGTATCCACGAGAAGTACGACGTCGGTGT GGAAGACATGGGCGTCAAGACCAACTGA
Upstream 100 bases:
>100_bases ACGTTTCGAAAAAAGGAGGCGACACATATCAATCTTCATAACTGAAAAACAACTTGAGACATAACTCAACAACACAACCA CCAATAACAAAGGAGAAACC
Downstream 100 bases:
>100_bases TCGTATATCTGATCTCATATCCGACATCGCACGGGATTATTCCGGTTTTGCTCAGTATCAATCATGAATAATCCCGTGCG GTATCGCAAATTACAACTTG
Product: extracellular solute-binding protein, family 1
Products: NA
Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component; Maltose/Trehalose Porter; Sugar ABC Transporter
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKITRGIALAAAVAMSLTTLAACGSDTAQDEETPDSLSFWYYEEDDAGQTQAWRRAAEAFEKETGVKINFERKSFTQIAQ NGSQFLNSDEAPDLMESNRGNGSAGVLSTMGLLTDLGDYVDQYGWDKKVTGANAAVAKYDENGIMDGDTWYGMTSYAEFQ RVYYNKDLFAKYGLEIPTTYDEFVDVCQKFVDAGVTPIAADAQEYGVMWLWWQLVSKEADAKFIDNWQLYKGDVDWNSNI LTNSVSTINDWLDKGFISRNATGMKAEDTTQAFIKGEYPIYQTGTWNQGRFVKQITTFDWDAAVMPESNFAIGCAGNLLV IPERSHHKDLAAKFIDYVLSDDVQNYLGNAGGIPVAGDASKINDEKSKAMIEEYASYANDGKLSYYPDYAASNLTDAVPA EFQELVNGTKKPADVLKGIHEKYDVGVEDMGVKTN
Sequences:
>Translated_435_residues MKITRGIALAAAVAMSLTTLAACGSDTAQDEETPDSLSFWYYEEDDAGQTQAWRRAAEAFEKETGVKINFERKSFTQIAQ NGSQFLNSDEAPDLMESNRGNGSAGVLSTMGLLTDLGDYVDQYGWDKKVTGANAAVAKYDENGIMDGDTWYGMTSYAEFQ RVYYNKDLFAKYGLEIPTTYDEFVDVCQKFVDAGVTPIAADAQEYGVMWLWWQLVSKEADAKFIDNWQLYKGDVDWNSNI LTNSVSTINDWLDKGFISRNATGMKAEDTTQAFIKGEYPIYQTGTWNQGRFVKQITTFDWDAAVMPESNFAIGCAGNLLV IPERSHHKDLAAKFIDYVLSDDVQNYLGNAGGIPVAGDASKINDEKSKAMIEEYASYANDGKLSYYPDYAASNLTDAVPA EFQELVNGTKKPADVLKGIHEKYDVGVEDMGVKTN >Mature_435_residues MKITRGIALAAAVAMSLTTLAACGSDTAQDEETPDSLSFWYYEEDDAGQTQAWRRAAEAFEKETGVKINFERKSFTQIAQ NGSQFLNSDEAPDLMESNRGNGSAGVLSTMGLLTDLGDYVDQYGWDKKVTGANAAVAKYDENGIMDGDTWYGMTSYAEFQ RVYYNKDLFAKYGLEIPTTYDEFVDVCQKFVDAGVTPIAADAQEYGVMWLWWQLVSKEADAKFIDNWQLYKGDVDWNSNI LTNSVSTINDWLDKGFISRNATGMKAEDTTQAFIKGEYPIYQTGTWNQGRFVKQITTFDWDAAVMPESNFAIGCAGNLLV IPERSHHKDLAAKFIDYVLSDDVQNYLGNAGGIPVAGDASKINDEKSKAMIEEYASYANDGKLSYYPDYAASNLTDAVPA EFQELVNGTKKPADVLKGIHEKYDVGVEDMGVKTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48194; Mature: 48194
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITRGIALAAAVAMSLTTLAACGSDTAQDEETPDSLSFWYYEEDDAGQTQAWRRAAEAF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH EKETGVKINFERKSFTQIAQNGSQFLNSDEAPDLMESNRGNGSAGVLSTMGLLTDLGDYV HHHCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH DQYGWDKKVTGANAAVAKYDENGIMDGDTWYGMTSYAEFQRVYYNKDLFAKYGLEIPTTY HHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCH DEFVDVCQKFVDAGVTPIAADAQEYGVMWLWWQLVSKEADAKFIDNWQLYKGDVDWNSNI HHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCH LTNSVSTINDWLDKGFISRNATGMKAEDTTQAFIKGEYPIYQTGTWNQGRFVKQITTFDW HHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEECCCCEEECCCCCCCCHHHHHHCCCC DAAVMPESNFAIGCAGNLLVIPERSHHKDLAAKFIDYVLSDDVQNYLGNAGGIPVAGDAS CCEECCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH KINDEKSKAMIEEYASYANDGKLSYYPDYAASNLTDAVPAEFQELVNGTKKPADVLKGIH HCCCHHHHHHHHHHHHHCCCCCEEECCCHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHH EKYDVGVEDMGVKTN HHHCCCHHHCCCCCC >Mature Secondary Structure MKITRGIALAAAVAMSLTTLAACGSDTAQDEETPDSLSFWYYEEDDAGQTQAWRRAAEAF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH EKETGVKINFERKSFTQIAQNGSQFLNSDEAPDLMESNRGNGSAGVLSTMGLLTDLGDYV HHHCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH DQYGWDKKVTGANAAVAKYDENGIMDGDTWYGMTSYAEFQRVYYNKDLFAKYGLEIPTTY HHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCH DEFVDVCQKFVDAGVTPIAADAQEYGVMWLWWQLVSKEADAKFIDNWQLYKGDVDWNSNI HHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCH LTNSVSTINDWLDKGFISRNATGMKAEDTTQAFIKGEYPIYQTGTWNQGRFVKQITTFDW HHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEECCCCEEECCCCCCCCHHHHHHCCCC DAAVMPESNFAIGCAGNLLVIPERSHHKDLAAKFIDYVLSDDVQNYLGNAGGIPVAGDAS CCEECCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH KINDEKSKAMIEEYASYANDGKLSYYPDYAASNLTDAVPAEFQELVNGTKKPADVLKGIH HCCCHHHHHHHHHHHHHCCCCCEEECCCHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHH EKYDVGVEDMGVKTN HHHCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA