Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is trxB [H]

Identifier: 213690960

GI number: 213690960

Start: 37155

End: 39071

Strand: Direct

Name: trxB [H]

Synonym: Blon_0036

Alternate gene names: 213690960

Gene position: 37155-39071 (Clockwise)

Preceding gene: 213690959

Following gene: 213690963

Centisome position: 1.31

GC content: 64.84

Gene sequence:

>1917_bases
ATGACTCAGACCAACAATCTCTATGACGTCGTCGTCATTGGTGGCGGGCCGGCTGGCCTGACGGCCGGCCTGTACCTGGC
CCGCGCTCGCTACCGTGTGCTGATTCTTGAAAAAGATGATTTCGGCGGCCAGATCACCATCACCAACGAAGTCGTCAACT
ATCCGGGCGTGGGCCGCACCACGGGCCGCGCGCTCACCCAAACCATGCGTCAGCAGGCTCAGGACTTTGGTGCCGAATTC
CTCTCCGCCGAAGCCACCGGTCTCGACGTGGATGGTGACATCAAAACCGTGCACACCTCACGCGGCGACCTCAAGACGTT
CGGCATCCTCATCGCCACCGGCGCCAGCCCGCGCAAGCTGGGCTTCGAGGGCGAGGCCGAATACGCCGGCCGTGGCGTGG
CCTACTGTGCCACCTGCGACGGTGAGTTCTTCACCGGCAAGGAAGTGCTGGTGGTCGGCGGCGGATTCGCCGCGGCCGAG
GAATCCGTGTTCCTGACCAAATACGCCTCCAAAGTCACCGTGCTCGTGCGCGAACCGGACTTTACATGCGACGCCGCAGT
GGCCGCCGAAGCCAAGAACAACCCGAAGATCGACGTGCGTTATCAGGTCGAGCTGAAGGGCGTCACCGCCGGCCAAGGCG
GCCTGCGAGAAGCCTCGATCCTGAACCTTGCCACCGGCCAGACCGAAACGTGGAAGCCCGCCGACGCCGGCACCTTCGGC
GTCTTCGTGTTCGCCGGCTATGTGCCCGCCACCGATCTGGTGCGCGGCGTAGTGGAGCTCGATGATCACGGTTACGTGGT
CACGCACGACTACCTCGAAACCTCGGTGCCGGGCGTATACGCGGCCGGCGATCTGCGCGTCAAGAACCTGCGCCAGGTGG
TCACCGCCACCGCCGACGGCGCGATTGCCGCCGTGGAACTGGAGCGTTATGCCAAGCAGATGAGCGAGAAAACCGGCTTG
GTGCCGCCGCGTCCCACTGCTTCCGCTTATGAGGAGTCCGAGGCCAAAGCCGCCTCCGCCGCTTCGGCCGCTGGCACGAC
GCCCGCCCCGGCTCCCGCCAAACGCAGCGCCGATGCCGCAGCCGCAGCCAGCGCCGCCAAGAAGTCCGGCGAACTGTTCT
CCGCCGCCATCAAGCAGCAGCTTGGCGTGGTCTTCGGCCGCATGACCCGCCCGGTCACCCTTGCCCTTGAGCTGGACAGC
ACCCCGCTTTCGGCGGAATTGCAGGGCTTCATCGGCGAGATGGTCGCGTTGTCGAATGGCAAGCTGAACTCGGTCGCCGT
CGATGCCGCAGGGCTGATCACGGCGGTGGATGGTGCTTCTGTGCCTACTTCTTTGGTGGTTGGCGAGCCATTGGCCGTCA
CTTTGCCGGACGGCACCGAACTGCCCACTTATGGTTCGTTGGACGATTCCGGCCGCGCCACATTCGACGTCGCCGGCGTC
CTGCCGCTCGCCCGCCCAACTGTGCGCATCTGCGTGCCGGCTGAGGGCGACGGCAAAGCCGGCAAGGACGGCAATGGTTC
ACTGGTCTTCACCGGTCTGGCCTTCCACGGCGTACCTTCCGGCCACGAGTTCAACTCGTTCGTGCTTGGCCTGTACAATG
CGGCCGGTCCCGGCCAGCCGCTGGGTGATGACCTGGTCGAACGCGCGAAGTCCATCACGGACCCGCTGAACATCATGATC
CTCGTCTCGCTCACCTGCACGATGTGCCCGGAAACCGTGCTTGCTTCCCAGCGCATTGCCTCCCTGAGCCCGGCCGTGCG
CGCCGAAGCCTACGACGTCTCGCACTTCCCCGAACTTAAGGACCAGTACGGCGCGATGAGCGTGCCCTGCATCGTCATCA
CCCACGCCGACGGCACCCAGCAAGTCGAATTCGGCAAAAAGAGCATCCCCCAAATGCTCGAACTGGTCGGCGCGTAA

Upstream 100 bases:

>100_bases
GGAGTGCTCGCGAGAGCTAGCCTGATCCGATATGCTCCCCTCAGTCTCACTACGACAGCTCCCCTCAGAGAGGGGAGCCA
GTGTATGTAAGGGAGTTTTC

Downstream 100 bases:

>100_bases
GCCGCACGACCTCAGGTACTCAACAGCAACAACAACGATTCTGCCAAAATCGTGACGTACATCGACTGATGCGATCGATG
CGCCCGACTCCGGCAGAATC

Product: FAD-dependent pyridine nucleotide-disulphide oxidoreductase

Products: NA

Alternate protein names: TRXR [H]

Number of amino acids: Translated: 638; Mature: 637

Protein sequence:

>638_residues
MTQTNNLYDVVVIGGGPAGLTAGLYLARARYRVLILEKDDFGGQITITNEVVNYPGVGRTTGRALTQTMRQQAQDFGAEF
LSAEATGLDVDGDIKTVHTSRGDLKTFGILIATGASPRKLGFEGEAEYAGRGVAYCATCDGEFFTGKEVLVVGGGFAAAE
ESVFLTKYASKVTVLVREPDFTCDAAVAAEAKNNPKIDVRYQVELKGVTAGQGGLREASILNLATGQTETWKPADAGTFG
VFVFAGYVPATDLVRGVVELDDHGYVVTHDYLETSVPGVYAAGDLRVKNLRQVVTATADGAIAAVELERYAKQMSEKTGL
VPPRPTASAYEESEAKAASAASAAGTTPAPAPAKRSADAAAAASAAKKSGELFSAAIKQQLGVVFGRMTRPVTLALELDS
TPLSAELQGFIGEMVALSNGKLNSVAVDAAGLITAVDGASVPTSLVVGEPLAVTLPDGTELPTYGSLDDSGRATFDVAGV
LPLARPTVRICVPAEGDGKAGKDGNGSLVFTGLAFHGVPSGHEFNSFVLGLYNAAGPGQPLGDDLVERAKSITDPLNIMI
LVSLTCTMCPETVLASQRIASLSPAVRAEAYDVSHFPELKDQYGAMSVPCIVITHADGTQQVEFGKKSIPQMLELVGA

Sequences:

>Translated_638_residues
MTQTNNLYDVVVIGGGPAGLTAGLYLARARYRVLILEKDDFGGQITITNEVVNYPGVGRTTGRALTQTMRQQAQDFGAEF
LSAEATGLDVDGDIKTVHTSRGDLKTFGILIATGASPRKLGFEGEAEYAGRGVAYCATCDGEFFTGKEVLVVGGGFAAAE
ESVFLTKYASKVTVLVREPDFTCDAAVAAEAKNNPKIDVRYQVELKGVTAGQGGLREASILNLATGQTETWKPADAGTFG
VFVFAGYVPATDLVRGVVELDDHGYVVTHDYLETSVPGVYAAGDLRVKNLRQVVTATADGAIAAVELERYAKQMSEKTGL
VPPRPTASAYEESEAKAASAASAAGTTPAPAPAKRSADAAAAASAAKKSGELFSAAIKQQLGVVFGRMTRPVTLALELDS
TPLSAELQGFIGEMVALSNGKLNSVAVDAAGLITAVDGASVPTSLVVGEPLAVTLPDGTELPTYGSLDDSGRATFDVAGV
LPLARPTVRICVPAEGDGKAGKDGNGSLVFTGLAFHGVPSGHEFNSFVLGLYNAAGPGQPLGDDLVERAKSITDPLNIMI
LVSLTCTMCPETVLASQRIASLSPAVRAEAYDVSHFPELKDQYGAMSVPCIVITHADGTQQVEFGKKSIPQMLELVGA
>Mature_637_residues
TQTNNLYDVVVIGGGPAGLTAGLYLARARYRVLILEKDDFGGQITITNEVVNYPGVGRTTGRALTQTMRQQAQDFGAEFL
SAEATGLDVDGDIKTVHTSRGDLKTFGILIATGASPRKLGFEGEAEYAGRGVAYCATCDGEFFTGKEVLVVGGGFAAAEE
SVFLTKYASKVTVLVREPDFTCDAAVAAEAKNNPKIDVRYQVELKGVTAGQGGLREASILNLATGQTETWKPADAGTFGV
FVFAGYVPATDLVRGVVELDDHGYVVTHDYLETSVPGVYAAGDLRVKNLRQVVTATADGAIAAVELERYAKQMSEKTGLV
PPRPTASAYEESEAKAASAASAAGTTPAPAPAKRSADAAAAASAAKKSGELFSAAIKQQLGVVFGRMTRPVTLALELDST
PLSAELQGFIGEMVALSNGKLNSVAVDAAGLITAVDGASVPTSLVVGEPLAVTLPDGTELPTYGSLDDSGRATFDVAGVL
PLARPTVRICVPAEGDGKAGKDGNGSLVFTGLAFHGVPSGHEFNSFVLGLYNAAGPGQPLGDDLVERAKSITDPLNIMIL
VSLTCTMCPETVLASQRIASLSPAVRAEAYDVSHFPELKDQYGAMSVPCIVITHADGTQQVEFGKKSIPQMLELVGA

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787114, Length=310, Percent_Identity=33.2258064516129, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI87081763, Length=303, Percent_Identity=30.03300330033, Blast_Score=129, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6321898, Length=320, Percent_Identity=35.625, Blast_Score=175, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6320560, Length=318, Percent_Identity=35.5345911949685, Blast_Score=173, Evalue=8e-44,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR008255
- InterPro:   IPR001327
- InterPro:   IPR000103
- InterPro:   IPR005982 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.8.1.9 [H]

Molecular weight: Translated: 66281; Mature: 66149

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTNNLYDVVVIGGGPAGLTAGLYLARARYRVLILEKDDFGGQITITNEVVNYPGVGRT
CCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCC
TGRALTQTMRQQAQDFGAEFLSAEATGLDVDGDIKTVHTSRGDLKTFGILIATGASPRKL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCC
GFEGEAEYAGRGVAYCATCDGEFFTGKEVLVVGGGFAAAEESVFLTKYASKVTVLVREPD
CCCCCCCCCCCCEEEEEECCCCEECCCEEEEEECCCHHCCCCEEEEEECCEEEEEEECCC
FTCDAAVAAEAKNNPKIDVRYQVELKGVTAGQGGLREASILNLATGQTETWKPADAGTFG
CCCCHHEEECCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEE
VFVFAGYVPATDLVRGVVELDDHGYVVTHDYLETSVPGVYAAGDLRVKNLRQVVTATADG
EEEEECCCCHHHHHHHHHEECCCCEEEEECHHHCCCCCEEEECCCCHHHHHHHHHHCCCC
AIAAVELERYAKQMSEKTGLVPPRPTASAYEESEAKAASAASAAGTTPAPAPAKRSADAA
CEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
AAASAAKKSGELFSAAIKQQLGVVFGRMTRPVTLALELDSTPLSAELQGFIGEMVALSNG
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHEECCC
KLNSVAVDAAGLITAVDGASVPTSLVVGEPLAVTLPDGTELPTYGSLDDSGRATFDVAGV
CCCEEEEECCCEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECC
LPLARPTVRICVPAEGDGKAGKDGNGSLVFTGLAFHGVPSGHEFNSFVLGLYNAAGPGQP
CCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCC
LGDDLVERAKSITDPLNIMILVSLTCTMCPETVLASQRIASLSPAVRAEAYDVSHFPELK
CCHHHHHHHHHHCCCCEEEEEEEEHHHHCCHHHHHHHHHHHCCCHHHHEEECCCCCCHHH
DQYGAMSVPCIVITHADGTQQVEFGKKSIPQMLELVGA
HHCCCEECCEEEEEECCCCCHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure 
TQTNNLYDVVVIGGGPAGLTAGLYLARARYRVLILEKDDFGGQITITNEVVNYPGVGRT
CCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCC
TGRALTQTMRQQAQDFGAEFLSAEATGLDVDGDIKTVHTSRGDLKTFGILIATGASPRKL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCC
GFEGEAEYAGRGVAYCATCDGEFFTGKEVLVVGGGFAAAEESVFLTKYASKVTVLVREPD
CCCCCCCCCCCCEEEEEECCCCEECCCEEEEEECCCHHCCCCEEEEEECCEEEEEEECCC
FTCDAAVAAEAKNNPKIDVRYQVELKGVTAGQGGLREASILNLATGQTETWKPADAGTFG
CCCCHHEEECCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEE
VFVFAGYVPATDLVRGVVELDDHGYVVTHDYLETSVPGVYAAGDLRVKNLRQVVTATADG
EEEEECCCCHHHHHHHHHEECCCCEEEEECHHHCCCCCEEEECCCCHHHHHHHHHHCCCC
AIAAVELERYAKQMSEKTGLVPPRPTASAYEESEAKAASAASAAGTTPAPAPAKRSADAA
CEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
AAASAAKKSGELFSAAIKQQLGVVFGRMTRPVTLALELDSTPLSAELQGFIGEMVALSNG
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHEECCC
KLNSVAVDAAGLITAVDGASVPTSLVVGEPLAVTLPDGTELPTYGSLDDSGRATFDVAGV
CCCEEEEECCCEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECC
LPLARPTVRICVPAEGDGKAGKDGNGSLVFTGLAFHGVPSGHEFNSFVLGLYNAAGPGQP
CCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCC
LGDDLVERAKSITDPLNIMILVSLTCTMCPETVLASQRIASLSPAVRAEAYDVSHFPELK
CCHHHHHHHHHHCCCCEEEEEEEEHHHHCCHHHHHHHHHHHCCCHHHHEEECCCCCCHHH
DQYGAMSVPCIVITHADGTQQVEFGKKSIPQMLELVGA
HHCCCEECCEEEEEECCCCCHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8223622; 2537814 [H]