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The map label for this gene is yfgC [C]

Identifier: 213158649

GI number: 213158649

Start: 2694621

End: 2696057

Strand: Reverse

Name: yfgC [C]

Synonym: AB57_2603

Alternate gene names: 213158649

Gene position: 2696057-2694621 (Counterclockwise)

Preceding gene: 213158650

Following gene: 213158646

Centisome position: 66.56

GC content: 40.57

Gene sequence:

>1437_bases
TTGAAATTTTTGCCAGTTATTTTAAGTTTGGCTTTGATAACAAATGCCTCTTACGCTAATCCTTTTGACCCCAAGCCAGT
TTCTGGACAGGTTGAAATTCCAAATATTGGAAGTGGAATAGGGCTGCTCGACCAACAGAAAGAAAAATTTATTGGTGAAA
AAGTTTTCCGTGAAGTTCATAAACAAATGCCGGTCATACAGGATGTATGGCTAGAAGATCAGTTTTTTCAAGTTTTCTCT
AATATTTTAAGTGAAACTCAGCTGGGGCAGCCGATCGCTCTGGTTGTAATTAAAGACCCTCAAATTAACGCATTTGCTGT
TCCAGGTGGGTTATTTGCATTAAATACTGGCCTTATCTCATCAGCACGAAATATTGATGAAATTGCGGGGGTAATGGCCC
ATGAAATTGCTCACGTTTCGCAAAGGCACTTTAGTCGTTCGGAAGAAGCTTTTAAAGGACAAACCCTTTTAAGCTTGGCT
GGTTTGTTGGCAGGGGTGGCTTTAGCTGCTCAGGCTGGTGGAGACGCTGGTGCCGCTGTTATGTTGGGTACACAAGCAGC
ACTTCTTGATAAACAGCTCACTTATAGTCGTAATCAAGAGCGTGAAGCGGATCGAATTGGTATGCAATATATGTATGCCG
CTGGTTATAACCCGCAAAGCATGGCGGATTATTTTGAAACGATGCATAGAGCGACAAGCCGAGTAAGTTTTTTACCAGAT
TTTTGGCTGACTCACCCACTTACATCTGAACGTATGAGTGAGGCTCGCTTGAGAGCAAACCAGATGCCTAAAGTTAAAAG
TCGAATATATGATGTCGATTTTGAAATTTTAAAATGGTATACCATGGTGGTTGCTGGAGAAGCTACTGAAAATCAGTTGC
AAAGTCTGGCATCGCAAAAAAATCTGGCAGGCTTATTGGCTTTGTCAGCTTTCTACCTTAAACAAGGGGATTATACTCAA
GCCCAAGCAACGTTGGAGCAGGCGAAATCAAGCGGTAAGCCATTAGTTGCCTTAATTCAAACAGATATTTATTTAGGCCA
GAATAAAATTGATCAGGCTTATAATTCGATTGCTCCCTTGCAAATGACAATGCCTGAAAATAAAGCTTTTAGCTACAAAT
TGGCTGAGGTTTTATTACGTCAAGGTAAGTATGCTCAAGTGCAAACTTTGGTGCAGCGTTTTATTAATAAAAATGCCCGA
GATATTCAAGGTTGGCAATTATTACAACAAGCCGCCAATTTAGATAAAAATTCACCATTAAGAGCTGTGAATGTATTGCG
CTATCGTGCTGAAGCACAGTACTGGTCTGGTAGTGAAGAGGATGCAATTAAATCGATGTTGCATGCACAACGTCTTGCAA
AAGGTAATCAGGCCATGTCAGCCAGAATAGATAGTCGATTAAAGCAAATGCAAGATGAGCGACGAATGAAAATTTAA

Upstream 100 bases:

>100_bases
CAATGTTATAGTGAAAGCCTGTTGATATGATGCAAAATAACTGAAGCATGATATTGATGGGTCTTTTTTGTTATTTTAAT
TTTTAATAAGAGAAGAACTT

Downstream 100 bases:

>100_bases
GGTCTAGGATGACTTTGGAATTTTCACAGGCATAAATATACTTAAACTTACGAGAAAGTTTAATTTAAGGATATATAAGA
AGAGAGGGAGATTAAGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MKFLPVILSLALITNASYANPFDPKPVSGQVEIPNIGSGIGLLDQQKEKFIGEKVFREVHKQMPVIQDVWLEDQFFQVFS
NILSETQLGQPIALVVIKDPQINAFAVPGGLFALNTGLISSARNIDEIAGVMAHEIAHVSQRHFSRSEEAFKGQTLLSLA
GLLAGVALAAQAGGDAGAAVMLGTQAALLDKQLTYSRNQEREADRIGMQYMYAAGYNPQSMADYFETMHRATSRVSFLPD
FWLTHPLTSERMSEARLRANQMPKVKSRIYDVDFEILKWYTMVVAGEATENQLQSLASQKNLAGLLALSAFYLKQGDYTQ
AQATLEQAKSSGKPLVALIQTDIYLGQNKIDQAYNSIAPLQMTMPENKAFSYKLAEVLLRQGKYAQVQTLVQRFINKNAR
DIQGWQLLQQAANLDKNSPLRAVNVLRYRAEAQYWSGSEEDAIKSMLHAQRLAKGNQAMSARIDSRLKQMQDERRMKI

Sequences:

>Translated_478_residues
MKFLPVILSLALITNASYANPFDPKPVSGQVEIPNIGSGIGLLDQQKEKFIGEKVFREVHKQMPVIQDVWLEDQFFQVFS
NILSETQLGQPIALVVIKDPQINAFAVPGGLFALNTGLISSARNIDEIAGVMAHEIAHVSQRHFSRSEEAFKGQTLLSLA
GLLAGVALAAQAGGDAGAAVMLGTQAALLDKQLTYSRNQEREADRIGMQYMYAAGYNPQSMADYFETMHRATSRVSFLPD
FWLTHPLTSERMSEARLRANQMPKVKSRIYDVDFEILKWYTMVVAGEATENQLQSLASQKNLAGLLALSAFYLKQGDYTQ
AQATLEQAKSSGKPLVALIQTDIYLGQNKIDQAYNSIAPLQMTMPENKAFSYKLAEVLLRQGKYAQVQTLVQRFINKNAR
DIQGWQLLQQAANLDKNSPLRAVNVLRYRAEAQYWSGSEEDAIKSMLHAQRLAKGNQAMSARIDSRLKQMQDERRMKI
>Mature_478_residues
MKFLPVILSLALITNASYANPFDPKPVSGQVEIPNIGSGIGLLDQQKEKFIGEKVFREVHKQMPVIQDVWLEDQFFQVFS
NILSETQLGQPIALVVIKDPQINAFAVPGGLFALNTGLISSARNIDEIAGVMAHEIAHVSQRHFSRSEEAFKGQTLLSLA
GLLAGVALAAQAGGDAGAAVMLGTQAALLDKQLTYSRNQEREADRIGMQYMYAAGYNPQSMADYFETMHRATSRVSFLPD
FWLTHPLTSERMSEARLRANQMPKVKSRIYDVDFEILKWYTMVVAGEATENQLQSLASQKNLAGLLALSAFYLKQGDYTQ
AQATLEQAKSSGKPLVALIQTDIYLGQNKIDQAYNSIAPLQMTMPENKAFSYKLAEVLLRQGKYAQVQTLVQRFINKNAR
DIQGWQLLQQAANLDKNSPLRAVNVLRYRAEAQYWSGSEEDAIKSMLHAQRLAKGNQAMSARIDSRLKQMQDERRMKI

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=453, Percent_Identity=30.0220750551876, Blast_Score=157, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 53283; Mature: 53283

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00037 MYB_1 ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLPVILSLALITNASYANPFDPKPVSGQVEIPNIGSGIGLLDQQKEKFIGEKVFREVH
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
KQMPVIQDVWLEDQFFQVFSNILSETQLGQPIALVVIKDPQINAFAVPGGLFALNTGLIS
HHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHH
SARNIDEIAGVMAHEIAHVSQRHFSRSEEAFKGQTLLSLAGLLAGVALAAQAGGDAGAAV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
MLGTQAALLDKQLTYSRNQEREADRIGMQYMYAAGYNPQSMADYFETMHRATSRVSFLPD
EECCHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCH
FWLTHPLTSERMSEARLRANQMPKVKSRIYDVDFEILKWYTMVVAGEATENQLQSLASQK
HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
NLAGLLALSAFYLKQGDYTQAQATLEQAKSSGKPLVALIQTDIYLGQNKIDQAYNSIAPL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCCHHHHHHHHCCCCE
QMTMPENKAFSYKLAEVLLRQGKYAQVQTLVQRFINKNARDIQGWQLLQQAANLDKNSPL
EEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCH
RAVNVLRYRAEAQYWSGSEEDAIKSMLHAQRLAKGNQAMSARIDSRLKQMQDERRMKI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFLPVILSLALITNASYANPFDPKPVSGQVEIPNIGSGIGLLDQQKEKFIGEKVFREVH
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
KQMPVIQDVWLEDQFFQVFSNILSETQLGQPIALVVIKDPQINAFAVPGGLFALNTGLIS
HHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHH
SARNIDEIAGVMAHEIAHVSQRHFSRSEEAFKGQTLLSLAGLLAGVALAAQAGGDAGAAV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
MLGTQAALLDKQLTYSRNQEREADRIGMQYMYAAGYNPQSMADYFETMHRATSRVSFLPD
EECCHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCH
FWLTHPLTSERMSEARLRANQMPKVKSRIYDVDFEILKWYTMVVAGEATENQLQSLASQK
HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
NLAGLLALSAFYLKQGDYTQAQATLEQAKSSGKPLVALIQTDIYLGQNKIDQAYNSIAPL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCCHHHHHHHHCCCCE
QMTMPENKAFSYKLAEVLLRQGKYAQVQTLVQRFINKNARDIQGWQLLQQAANLDKNSPL
EEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCH
RAVNVLRYRAEAQYWSGSEEDAIKSMLHAQRLAKGNQAMSARIDSRLKQMQDERRMKI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]