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The map label for this gene is yddH [H]

Identifier: 213158528

GI number: 213158528

Start: 2573518

End: 2574096

Strand: Direct

Name: yddH [H]

Synonym: AB57_2479

Alternate gene names: 213158528

Gene position: 2573518-2574096 (Clockwise)

Preceding gene: 213158518

Following gene: 213158532

Centisome position: 63.54

GC content: 41.62

Gene sequence:

>579_bases
ATGTCCCAATCATATATTGCACCAGTAGAGTTAGAAAAAGCTTATCGTTTGTTAAATCATGGTCCAACTGTACTAGTCTC
TGCTCAGCATGGTGATGACCGTAACGTGATGGCTGCCGCATGGGCATGTGCCTTAGAGTTTAAGCCTGCTAAAGTGACTG
TCGTTTTAGATAAAAGTACTAAAACCCGACAGCTGGTTGAGCAAAGTGGTTATTTCACACTACAAGTTCCTTGCTATGCA
CAGCTCAATATGACCAAGCAACTTGGTACAATTAGCAAATTAGATGACCCACAAAAACTTGAACACTGCGGGGTTGAGCT
GTTTTATCAAAAAGATCTGACCAGTCCGCTTGTATCAGGTTGTATCGCATGGCTGGTATGTAAACTTATTCCTGAACCAC
ATAATCAGTCAGCTCATGATCTATTTATTGGTTCTGTTGTAGGTGCATGGGCAGATAGTCGCGTTTTTAGAGATGGGCAT
TGGCATTTTCAGGATGCACCAAAAGAACTTCGTAGTCTGCACTATATTGCTGGTGGCACATTTTATTTAATTGGTGAGGA
AGTGAAAGCCGATCTTTAA

Upstream 100 bases:

>100_bases
GGAAACAACTTTTTTATTCAGTTAATCCCCTATTACATTACTTCTCACATGCTTTCTGCAACAATAGAGCTATCCCTTTT
CTGTATTACTTAGGCTAAAT

Downstream 100 bases:

>100_bases
TATAAAGAATAAAGGGAAATTCTAAATATTTCCCTTTGTTCAATTAGCTTGCGTAGGCTTGCTGCATTTTTGCAATTTCT
TGCTGCTTCAACAGTCCTCT

Product: FMN-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSQSYIAPVELEKAYRLLNHGPTVLVSAQHGDDRNVMAAAWACALEFKPAKVTVVLDKSTKTRQLVEQSGYFTLQVPCYA
QLNMTKQLGTISKLDDPQKLEHCGVELFYQKDLTSPLVSGCIAWLVCKLIPEPHNQSAHDLFIGSVVGAWADSRVFRDGH
WHFQDAPKELRSLHYIAGGTFYLIGEEVKADL

Sequences:

>Translated_192_residues
MSQSYIAPVELEKAYRLLNHGPTVLVSAQHGDDRNVMAAAWACALEFKPAKVTVVLDKSTKTRQLVEQSGYFTLQVPCYA
QLNMTKQLGTISKLDDPQKLEHCGVELFYQKDLTSPLVSGCIAWLVCKLIPEPHNQSAHDLFIGSVVGAWADSRVFRDGH
WHFQDAPKELRSLHYIAGGTFYLIGEEVKADL
>Mature_191_residues
SQSYIAPVELEKAYRLLNHGPTVLVSAQHGDDRNVMAAAWACALEFKPAKVTVVLDKSTKTRQLVEQSGYFTLQVPCYAQ
LNMTKQLGTISKLDDPQKLEHCGVELFYQKDLTSPLVSGCIAWLVCKLIPEPHNQSAHDLFIGSVVGAWADSRVFRDGHW
HFQDAPKELRSLHYIAGGTFYLIGEEVKADL

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=190, Percent_Identity=41.5789473684211, Blast_Score=151, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 21430; Mature: 21299

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSYIAPVELEKAYRLLNHGPTVLVSAQHGDDRNVMAAAWACALEFKPAKVTVVLDKST
CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHEEEECCCEEEEEEECCC
KTRQLVEQSGYFTLQVPCYAQLNMTKQLGTISKLDDPQKLEHCGVELFYQKDLTSPLVSG
HHHHHHHHCCCEEEEECCEEEECCHHHHCCHHCCCCHHHHHHCCEEEEEHHCCCHHHHHH
CIAWLVCKLIPEPHNQSAHDLFIGSVVGAWADSRVFRDGHWHFQDAPKELRSLHYIAGGT
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHEEHCCCCE
FYLIGEEVKADL
EEEEEHHHCCCC
>Mature Secondary Structure 
SQSYIAPVELEKAYRLLNHGPTVLVSAQHGDDRNVMAAAWACALEFKPAKVTVVLDKST
CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHEEEECCCEEEEEEECCC
KTRQLVEQSGYFTLQVPCYAQLNMTKQLGTISKLDDPQKLEHCGVELFYQKDLTSPLVSG
HHHHHHHHCCCEEEEECCEEEECCHHHHCCHHCCCCHHHHHHCCEEEEEHHCCCHHHHHH
CIAWLVCKLIPEPHNQSAHDLFIGSVVGAWADSRVFRDGHWHFQDAPKELRSLHYIAGGT
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHEEHCCCCE
FYLIGEEVKADL
EEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]