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The map label for this gene is oruR [H]

Identifier: 213158532

GI number: 213158532

Start: 2578095

End: 2579123

Strand: Direct

Name: oruR [H]

Synonym: AB57_2483

Alternate gene names: 213158532

Gene position: 2578095-2579123 (Clockwise)

Preceding gene: 213158528

Following gene: 213158533

Centisome position: 63.65

GC content: 37.03

Gene sequence:

>1029_bases
ATGGTTGTCCAATCTTCTTTAAGTAAAGGAACAATTTCGATTGCACTGGTACATGAAGCATTAAGTGCGGCTTATGCCAA
AGGGCTCAATACTCAAATTATTTTGAATAAAGCTGGCATTCCTGCTGAATTACTTATGACACCTAAAGCGCGTGTTCCGG
TAGCAACGTATGCACAATTATGGATAGAACTTGCCAATGCCATGGATGACGAGTTTTTTGGCATGGATAGTCACCCTATG
CGCCGTGGTAGTTATAAATTACTTACAAAACTCGTCAGTACGGCTGAAACTTTAGAAAAAGCGCTCTACGATATTTTGAA
GTTTTTTAATTTTGTGCTTGACGATATACGAGGAGAACTCATTCGAGAACAAGAAAAAGCTTATTTGGTGATTCATGATC
AAGAACAACCCAAACGTATGTTTACTTACGCAACCTTTTTAATGTTGGTACATGGGCTTATGTGTTGGTTAGTAGATCAA
CGAATTAGTTTAAACAGTATTGCGGTACGTTGTCCAAAACCGAACGATATTCAAGATTATTTGGTACGCTTTTGTGAAGA
TATACAATTTAATGCCGAGACAAATCAGATTGAATTTGATGCCCACTATTTAGATATTAAAATTAAAAAAGATAAAAAAG
CACTTTATGATTTTTTAGAGCAAACTCCACAAAATCTTTTAGTTCGCTTTAAAAATGAAAATGCATTGAGTGTTGTTATT
CGGCGTCATTTATTGAAACTTCACCCAGCCGAATGGCCTGAACTCAAAGATGTCGCACAGCAGCTCAATATTTCAGAGGC
TACCGTTCAACGCCGACTCAAACATGAAGGAGTGAGTTATCAACAAATTAAAAATGAAATCCGCTGTGATATTGCTGTTC
AACGCTTAAGCAAAACGAATGACTCAATTCAAGATATTAGTGAAGACTTAAATTTCCATGATCCAAGTGCTTTTCACCGT
GCTTTTAAAAAATGGACGGGTGTCAGCCCCGGCGCTTATCGAGATAACTTAACTACATTCAAGCAATAA

Upstream 100 bases:

>100_bases
TACAATTTCAAAAAACCTCAAAATGCTTGCAGCTTTTGATCAATCCAAATTTTGAATATGAAATATTTCACTTGAAATAC
GTAAAAAATGAGTCTTTGAC

Downstream 100 bases:

>100_bases
CATATACATCGGATGAAGTTTAAGGCATTAGGGCTTAAGCTTATGATATTTATGTCTTTTAAATTCAATATTTCAGATAA
ATGCATTATTTAAAAAATTA

Product: transcriptional regulator, AraC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MVVQSSLSKGTISIALVHEALSAAYAKGLNTQIILNKAGIPAELLMTPKARVPVATYAQLWIELANAMDDEFFGMDSHPM
RRGSYKLLTKLVSTAETLEKALYDILKFFNFVLDDIRGELIREQEKAYLVIHDQEQPKRMFTYATFLMLVHGLMCWLVDQ
RISLNSIAVRCPKPNDIQDYLVRFCEDIQFNAETNQIEFDAHYLDIKIKKDKKALYDFLEQTPQNLLVRFKNENALSVVI
RRHLLKLHPAEWPELKDVAQQLNISEATVQRRLKHEGVSYQQIKNEIRCDIAVQRLSKTNDSIQDISEDLNFHDPSAFHR
AFKKWTGVSPGAYRDNLTTFKQ

Sequences:

>Translated_342_residues
MVVQSSLSKGTISIALVHEALSAAYAKGLNTQIILNKAGIPAELLMTPKARVPVATYAQLWIELANAMDDEFFGMDSHPM
RRGSYKLLTKLVSTAETLEKALYDILKFFNFVLDDIRGELIREQEKAYLVIHDQEQPKRMFTYATFLMLVHGLMCWLVDQ
RISLNSIAVRCPKPNDIQDYLVRFCEDIQFNAETNQIEFDAHYLDIKIKKDKKALYDFLEQTPQNLLVRFKNENALSVVI
RRHLLKLHPAEWPELKDVAQQLNISEATVQRRLKHEGVSYQQIKNEIRCDIAVQRLSKTNDSIQDISEDLNFHDPSAFHR
AFKKWTGVSPGAYRDNLTTFKQ
>Mature_342_residues
MVVQSSLSKGTISIALVHEALSAAYAKGLNTQIILNKAGIPAELLMTPKARVPVATYAQLWIELANAMDDEFFGMDSHPM
RRGSYKLLTKLVSTAETLEKALYDILKFFNFVLDDIRGELIREQEKAYLVIHDQEQPKRMFTYATFLMLVHGLMCWLVDQ
RISLNSIAVRCPKPNDIQDYLVRFCEDIQFNAETNQIEFDAHYLDIKIKKDKKALYDFLEQTPQNLLVRFKNENALSVVI
RRHLLKLHPAEWPELKDVAQQLNISEATVQRRLKHEGVSYQQIKNEIRCDIAVQRLSKTNDSIQDISEDLNFHDPSAFHR
AFKKWTGVSPGAYRDNLTTFKQ

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39417; Mature: 39417

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVQSSLSKGTISIALVHEALSAAYAKGLNTQIILNKAGIPAELLMTPKARVPVATYAQL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHH
WIELANAMDDEFFGMDSHPMRRGSYKLLTKLVSTAETLEKALYDILKFFNFVLDDIRGEL
HHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IREQEKAYLVIHDQEQPKRMFTYATFLMLVHGLMCWLVDQRISLNSIAVRCPKPNDIQDY
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
LVRFCEDIQFNAETNQIEFDAHYLDIKIKKDKKALYDFLEQTPQNLLVRFKNENALSVVI
HHHHHHHCCCCCCCCEEEEEEEEEEEEEECHHHHHHHHHHHCHHHHEEEECCCCHHHHHH
RRHLLKLHPAEWPELKDVAQQLNISEATVQRRLKHEGVSYQQIKNEIRCDIAVQRLSKTN
HHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
DSIQDISEDLNFHDPSAFHRAFKKWTGVSPGAYRDNLTTFKQ
CHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MVVQSSLSKGTISIALVHEALSAAYAKGLNTQIILNKAGIPAELLMTPKARVPVATYAQL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHH
WIELANAMDDEFFGMDSHPMRRGSYKLLTKLVSTAETLEKALYDILKFFNFVLDDIRGEL
HHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IREQEKAYLVIHDQEQPKRMFTYATFLMLVHGLMCWLVDQRISLNSIAVRCPKPNDIQDY
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
LVRFCEDIQFNAETNQIEFDAHYLDIKIKKDKKALYDFLEQTPQNLLVRFKNENALSVVI
HHHHHHHCCCCCCCCEEEEEEEEEEEEEECHHHHHHHHHHHCHHHHEEEECCCCHHHHHH
RRHLLKLHPAEWPELKDVAQQLNISEATVQRRLKHEGVSYQQIKNEIRCDIAVQRLSKTN
HHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
DSIQDISEDLNFHDPSAFHRAFKKWTGVSPGAYRDNLTTFKQ
CHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]