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The map label for this gene is ydeK [H]

Identifier: 213158392

GI number: 213158392

Start: 2420959

End: 2421822

Strand: Reverse

Name: ydeK [H]

Synonym: AB57_2340

Alternate gene names: 213158392

Gene position: 2421822-2420959 (Counterclockwise)

Preceding gene: 213158393

Following gene: 213158387

Centisome position: 59.79

GC content: 41.2

Gene sequence:

>864_bases
ATGCAAAAGTTTATGAACGGTTGGGTGAACGGTTTTATTGGGGTTGCAATTTTTGCCGGTTCATTACCGGCTACCCGTGT
TGCGGTAACAGGTTTTGAGCCTGGTTTTCTAACAGCAGCAAGAGCTGTCATTGCAGGAGTTTTGGGTTTAATTCTTATCT
TTTTGCTTAAGGAAAAAAAGCCTGCTAAACAAGATTGGTGGCCACTCGCTATTGTGGCTTTAGGCGTTGTAGTTGGGTTT
CCCTTATTTACTGCGCTTGCTCTACAGTATATGAACGCAGCCCACTCGATTGTCTTTGTTAGTCTTCTGCCATTAGCTAC
AGCCATATTTGCAGTAGTGAGAGGTGGAGAAAAACCAAATTTATTTTTTTGGATATTTGCAATTTTAGGCAGTCTGGTTG
TTTTTACCTATATGTTTTTCTTATCGGGTGAAGCTTCTTTTGGCATCGGCGATTTATACATGCTTATTGCAATTATTTTG
TGTGGATTTGGCTATGCCGAAGGCGGAGTACTTTCGAAAAAAATAGGTGGATGGCAGGTGATCTGTTGGGCGCTTATTTT
AGCTTTACCGATTATGCTGCTTGCTACTCTTTTTTATATGCCCGTTTCCTTTCAAGATGTATCTCCATCAGCGGTAGCAG
GGCTGGTTTACGTATCTTTATTTAGTATGCTCATCGGGTTCTTTTTTTGGTACAAAGGGCTTGCACAAGGTGGTATTGCT
GCAATTAGCCAGCTACAGCTTTTACAGCCTTTAATGGGACTTGCGATTGCCGCACTTTTATTACATGAACACGTAAGTTG
GTCGATGTTAATGGTAACAGCAGTAACAATTTTATGTGTCGCTGCCGCTAAAAAATTCGCATAA

Upstream 100 bases:

>100_bases
GTTTGCTTATACATAACAGTTTTTTTAAATTGTACTGCTTTGTATCTGGTTTTGACACCATATCACAGCTTAAATTCTTC
GTATAGTTGCGGAGAATAAT

Downstream 100 bases:

>100_bases
AAATCTATAAACAATTTGCCGGTTTAGGAATACCTGCCAAGCGACTGAGATGGCGAGCAACTAAACCGGTATTAAATTTT
TGCTGTAAAACTGCATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MQKFMNGWVNGFIGVAIFAGSLPATRVAVTGFEPGFLTAARAVIAGVLGLILIFLLKEKKPAKQDWWPLAIVALGVVVGF
PLFTALALQYMNAAHSIVFVSLLPLATAIFAVVRGGEKPNLFFWIFAILGSLVVFTYMFFLSGEASFGIGDLYMLIAIIL
CGFGYAEGGVLSKKIGGWQVICWALILALPIMLLATLFYMPVSFQDVSPSAVAGLVYVSLFSMLIGFFFWYKGLAQGGIA
AISQLQLLQPLMGLAIAALLLHEHVSWSMLMVTAVTILCVAAAKKFA

Sequences:

>Translated_287_residues
MQKFMNGWVNGFIGVAIFAGSLPATRVAVTGFEPGFLTAARAVIAGVLGLILIFLLKEKKPAKQDWWPLAIVALGVVVGF
PLFTALALQYMNAAHSIVFVSLLPLATAIFAVVRGGEKPNLFFWIFAILGSLVVFTYMFFLSGEASFGIGDLYMLIAIIL
CGFGYAEGGVLSKKIGGWQVICWALILALPIMLLATLFYMPVSFQDVSPSAVAGLVYVSLFSMLIGFFFWYKGLAQGGIA
AISQLQLLQPLMGLAIAALLLHEHVSWSMLMVTAVTILCVAAAKKFA
>Mature_287_residues
MQKFMNGWVNGFIGVAIFAGSLPATRVAVTGFEPGFLTAARAVIAGVLGLILIFLLKEKKPAKQDWWPLAIVALGVVVGF
PLFTALALQYMNAAHSIVFVSLLPLATAIFAVVRGGEKPNLFFWIFAILGSLVVFTYMFFLSGEASFGIGDLYMLIAIIL
CGFGYAEGGVLSKKIGGWQVICWALILALPIMLLATLFYMPVSFQDVSPSAVAGLVYVSLFSMLIGFFFWYKGLAQGGIA
AISQLQLLQPLMGLAIAALLLHEHVSWSMLMVTAVTILCVAAAKKFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30830; Mature: 30830

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFMNGWVNGFIGVAIFAGSLPATRVAVTGFEPGFLTAARAVIAGVLGLILIFLLKEKK
CCHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PAKQDWWPLAIVALGVVVGFPLFTALALQYMNAAHSIVFVSLLPLATAIFAVVRGGEKPN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LFFWIFAILGSLVVFTYMFFLSGEASFGIGDLYMLIAIILCGFGYAEGGVLSKKIGGWQV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHH
ICWALILALPIMLLATLFYMPVSFQDVSPSAVAGLVYVSLFSMLIGFFFWYKGLAQGGIA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AISQLQLLQPLMGLAIAALLLHEHVSWSMLMVTAVTILCVAAAKKFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKFMNGWVNGFIGVAIFAGSLPATRVAVTGFEPGFLTAARAVIAGVLGLILIFLLKEKK
CCHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PAKQDWWPLAIVALGVVVGFPLFTALALQYMNAAHSIVFVSLLPLATAIFAVVRGGEKPN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LFFWIFAILGSLVVFTYMFFLSGEASFGIGDLYMLIAIILCGFGYAEGGVLSKKIGGWQV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHH
ICWALILALPIMLLATLFYMPVSFQDVSPSAVAGLVYVSLFSMLIGFFFWYKGLAQGGIA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AISQLQLLQPLMGLAIAALLLHEHVSWSMLMVTAVTILCVAAAKKFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]