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The map label for this gene is 213158393

Identifier: 213158393

GI number: 213158393

Start: 2423345

End: 2423827

Strand: Reverse

Name: 213158393

Synonym: AB57_2341

Alternate gene names: NA

Gene position: 2423827-2423345 (Counterclockwise)

Preceding gene: 213158395

Following gene: 213158392

Centisome position: 59.84

GC content: 40.37

Gene sequence:

>483_bases
ATGAAATGGGATGACATCGGTGATCAGCCTTGTTCTGTTGCCCGTATGCTATCAGTGATTGGTGATCGATGGACGATGCT
AATATTACGTAATGCTTTTATGGGAATTCGTCGTTTTGATGACTTTCAAAAATCATTAGGTGTCACTCGTCATGTCCTTT
CTGATCGCTTAAAACGGTTGGTTGAATACGAAATTTTAGTGAAAGCGCCTTATTTTGACCGTCAGGAACGCTTTGAATAT
CGTCTCACAGATAAAGGCTTTGAGCTTTATCCAATTATCTTATCTATGGCGAACTGGGCAGATAAATGGATGGACCAAGG
TTTAGGTAAACCTTTGGAATATCGACACAAAGCATGTGGACATAAGTTTGAACCTGTTATGGTGTGTTCAGTATGTCGTG
AACCATTACATGCAAAACAAGTTCAGGTTTCGGCTGGGCCGGGCTATTTTGCTTATATGGAACAAAAGCAAAAACAGGCT
TAA

Upstream 100 bases:

>100_bases
AACTTATTTCTAAGCTGAATATTGCATATAACATATTAAGTGGTTTAGGGTATAAATAATAAGGCAAGTAGGCCAGTTTT
ATATTGAGGAAAGCATAAAG

Downstream 100 bases:

>100_bases
ACTTGTTTCTCTAACGACTCTTGTAGAAGCGCTTCTGCAAGAGTCTTATAAATATAATCATGATTTGATTGTGTAATATT
AAAACGGATAAATTGACCTG

Product: transcriptional regulator, HxlR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKWDDIGDQPCSVARMLSVIGDRWTMLILRNAFMGIRRFDDFQKSLGVTRHVLSDRLKRLVEYEILVKAPYFDRQERFEY
RLTDKGFELYPIILSMANWADKWMDQGLGKPLEYRHKACGHKFEPVMVCSVCREPLHAKQVQVSAGPGYFAYMEQKQKQA

Sequences:

>Translated_160_residues
MKWDDIGDQPCSVARMLSVIGDRWTMLILRNAFMGIRRFDDFQKSLGVTRHVLSDRLKRLVEYEILVKAPYFDRQERFEY
RLTDKGFELYPIILSMANWADKWMDQGLGKPLEYRHKACGHKFEPVMVCSVCREPLHAKQVQVSAGPGYFAYMEQKQKQA
>Mature_160_residues
MKWDDIGDQPCSVARMLSVIGDRWTMLILRNAFMGIRRFDDFQKSLGVTRHVLSDRLKRLVEYEILVKAPYFDRQERFEY
RLTDKGFELYPIILSMANWADKWMDQGLGKPLEYRHKACGHKFEPVMVCSVCREPLHAKQVQVSAGPGYFAYMEQKQKQA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 18812; Mature: 18812

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWDDIGDQPCSVARMLSVIGDRWTMLILRNAFMGIRRFDDFQKSLGVTRHVLSDRLKRL
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYEILVKAPYFDRQERFEYRLTDKGFELYPIILSMANWADKWMDQGLGKPLEYRHKACG
HHHHHHEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
HKFEPVMVCSVCREPLHAKQVQVSAGPGYFAYMEQKQKQA
CCCCHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKWDDIGDQPCSVARMLSVIGDRWTMLILRNAFMGIRRFDDFQKSLGVTRHVLSDRLKRL
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYEILVKAPYFDRQERFEYRLTDKGFELYPIILSMANWADKWMDQGLGKPLEYRHKACG
HHHHHHEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
HKFEPVMVCSVCREPLHAKQVQVSAGPGYFAYMEQKQKQA
CCCCHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]