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The map label for this gene is prmA

Identifier: 213157613

GI number: 213157613

Start: 3197773

End: 3198441

Strand: Reverse

Name: prmA

Synonym: AB57_3090

Alternate gene names: NA

Gene position: 3198441-3197773 (Counterclockwise)

Preceding gene: 213157614

Following gene: 213158357

Centisome position: 78.96

GC content: 38.57

Gene sequence:

>669_bases
ATGAGCTGCACCTTTCAACTGTCCAAAGCCCCTGAACATTTACTTCAAGCCTTACATGAAGTCATTCCTCATTGTGAATT
AATGGCACAACAGTTGCCAGAAACTCCAATTTCTTTATGGTTGATTCCACCTGTTTTTCCAACTGATCGATTGGATGACG
AAGTTATTTGCCGTATCTGGAATGACACGCCGTATTGGATTTTCTGTTGGGCATCAGGCTTGGCGATGGCTCAGTGGATA
CTTGCAGAGCCGCACCATGTTAAAGATAAAGTGGTGTTAGATTTCGGAGCAGGTTCTGGTGTAGTGGCAATTGCTGCAAA
AATGGCAGGAGCAAAACGCGTAATCTGCTGTGATATTGATCAGGTTAGTCTAAATGCTTGCCGTGAAAATGCTTTACTTA
ATGATGTAGAACTCGAATATTTAGATGATTTATATAAGGCTGAACAAGTCGATGTTTTACTTGCTGCTGATGTGTTATAT
GACCAATGTAATCGCTTTTTCTTAGATGAATTTTTAAAATTTGCACCAGAAGTATGGGTAGCAGATAGCCGTGTTAAAAA
TTTTAGTCATCCAAAATATGAAAAAATTGAAGAAAGAAGTGCAACAACTTGGCCAGATCTGGATGAAGCAAAAGAATTTA
GAAATGTAAGTTTTTATAAGACGCTGTAA

Upstream 100 bases:

>100_bases
TATTTTTAGTAACTAGCCACTATCATGCTTTAAGCTACTGTTTTAGTCTTGCTCGTTATGCAGATGATCAAATAGTAATT
ATAAATTGTTGAGCTTATTT

Downstream 100 bases:

>100_bases
GAGAACAGCGTCTTTTTTATGTTATGAACAAGTATAACGAACGACTTTTAATGTACTTGGACGTGCTTCAAGTGCTTGGC
GTGTCGCATAATCTTCACCA

Product: ribosomal protein L11 methyltransferase

Products: NA

Alternate protein names: Methyltransferase; Methyltransferase Protein; Methyltransferase Type; Methyltransferase-Like Protein; C12orf72 Protein; SAM-Dependent Methyltransferease Protein

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSCTFQLSKAPEHLLQALHEVIPHCELMAQQLPETPISLWLIPPVFPTDRLDDEVICRIWNDTPYWIFCWASGLAMAQWI
LAEPHHVKDKVVLDFGAGSGVVAIAAKMAGAKRVICCDIDQVSLNACRENALLNDVELEYLDDLYKAEQVDVLLAADVLY
DQCNRFFLDEFLKFAPEVWVADSRVKNFSHPKYEKIEERSATTWPDLDEAKEFRNVSFYKTL

Sequences:

>Translated_222_residues
MSCTFQLSKAPEHLLQALHEVIPHCELMAQQLPETPISLWLIPPVFPTDRLDDEVICRIWNDTPYWIFCWASGLAMAQWI
LAEPHHVKDKVVLDFGAGSGVVAIAAKMAGAKRVICCDIDQVSLNACRENALLNDVELEYLDDLYKAEQVDVLLAADVLY
DQCNRFFLDEFLKFAPEVWVADSRVKNFSHPKYEKIEERSATTWPDLDEAKEFRNVSFYKTL
>Mature_221_residues
SCTFQLSKAPEHLLQALHEVIPHCELMAQQLPETPISLWLIPPVFPTDRLDDEVICRIWNDTPYWIFCWASGLAMAQWIL
AEPHHVKDKVVLDFGAGSGVVAIAAKMAGAKRVICCDIDQVSLNACRENALLNDVELEYLDDLYKAEQVDVLLAADVLYD
QCNRFFLDEFLKFAPEVWVADSRVKNFSHPKYEKIEERSATTWPDLDEAKEFRNVSFYKTL

Specific function: Unknown

COG id: COG3897

COG function: function code R; Predicted methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209529731, Length=151, Percent_Identity=30.4635761589404, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI209529729, Length=151, Percent_Identity=30.4635761589404, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI28603834, Length=151, Percent_Identity=30.4635761589404, Blast_Score=71, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25421; Mature: 25290

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCTFQLSKAPEHLLQALHEVIPHCELMAQQLPETPISLWLIPPVFPTDRLDDEVICRIW
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHEEEEE
NDTPYWIFCWASGLAMAQWILAEPHHVKDKVVLDFGAGSGVVAIAAKMAGAKRVICCDID
CCCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCC
QVSLNACRENALLNDVELEYLDDLYKAEQVDVLLAADVLYDQCNRFFLDEFLKFAPEVWV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ADSRVKNFSHPKYEKIEERSATTWPDLDEAKEFRNVSFYKTL
CHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCEECC
>Mature Secondary Structure 
SCTFQLSKAPEHLLQALHEVIPHCELMAQQLPETPISLWLIPPVFPTDRLDDEVICRIW
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHEEEEE
NDTPYWIFCWASGLAMAQWILAEPHHVKDKVVLDFGAGSGVVAIAAKMAGAKRVICCDID
CCCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCC
QVSLNACRENALLNDVELEYLDDLYKAEQVDVLLAADVLYDQCNRFFLDEFLKFAPEVWV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ADSRVKNFSHPKYEKIEERSATTWPDLDEAKEFRNVSFYKTL
CHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA