| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is kgtP [H]
Identifier: 21245020
GI number: 21245020
Start: 5094404
End: 5095765
Strand: Reverse
Name: kgtP [H]
Synonym: XAC4308
Alternate gene names: 21245020
Gene position: 5095765-5094404 (Counterclockwise)
Preceding gene: 21245023
Following gene: 21245014
Centisome position: 98.46
GC content: 63.22
Gene sequence:
>1362_bases ATGAGCGCACCCCCATCGTCTCCGATCGCTGCCGGTTCTGGCACCGCTGCCGGTAGCCTTCGCCGCTCGGTGTCCAACAC GCTCAAGGGCTCGGCCGGCAACCTCGTCGAGTGGTACGACGTCTACGTCTATTCGGTGTTCGCCACCTACTTCGAGTCGC AGTTCTTCTCCAAGGAAGACAAGAACGCCACCATGTTCGTGTGGGCGATCTTCGCGATGACGTTCCTGATGCGCCCGATC GGCGCCTGGTATTTCGGCCGTTTCGCCGACCGTTATGGCCGCCGCCTGGCGTTGACCATTTCGGTGTCGGTGATGGCGCT GTGCTCGTTCGTCATTGCGATCACGCCCACGGTGGCCACGATCGGCATCGCTGCGCCGATCATCTTGCTGGTGGCGCGCC TGCTGCAGGGCTTTGCGACCGGTGGCGAATACGGCACCAGCGCCACGTACATGTCCGAAGCGGCGATTCCGGGCCGGCGC GGGTTCCTGTCCTCGTTCCATTACGTCACGCTGGTTGGCGGGCACGTGCTGGCGCAGACCACCTTGCTGGTGATGCTGCA TTTCTTCGATGCCTCGCAGGTCTCCGAATGGGGCTGGCGCGTGGCGTTCGGGCTGGGCGGCATCGGTGCGTTGGTGGTGT TCTGGCTGCGCCAGACCATGGACGAGTCGCTGAGCTCCGAATCCATCGCCGATTCGCGCACCGGCAAGGCCAAGGCGTCG GGCTCGATGCGCGAGCTGTTCGTCAACCAGTGGCGCCCGCTGCTGCTGTGCTTCCTGATCACCGCCGGCGGCACGATCGC GTTCTACACCTATTCGGTCACCGGGCCGAAGATGATCCAGACCGCGTTCGCCGGCGGCGACGTGATGGCCGGCACCATCA TCAACCTGGTCGCGCTGACCGTGCTGATGCTGATGCAACCGGTCGGCGGCTGGCTGTCGGACATCGTCGGGCGCAAGACC TTGCTGGTGTTCTTCGGCATCGGCGGCGTGCTCTACACCTGGTTCCTGGTGATGGAACTGCCCAAGCAGACCGACTGGCT GACCGCGTTCGTGATTCTCACTGTGGGCTTTGTGATCCTGACCGGCTACACCTCGATCAATGCAGTGGTGAAGGCGGAAT TGTTCCCTACGCATGTGCGCGCGCTGGGCGTCGGTCTTGGCTACGCGTTGGCGAATTCGGCGTTCGGCGGCACCGCGCCG TTGCTGTATCAGGCCTCGCTGAAGACCAACCAAGTGACCGAGTTCGTGATCTATGCGACGGCGGTGATTGCGGTGTCGTT GGTGGTCTACATGTTCTTCCTGACCAACAAGGGCAGCAACTGGCTGGACGACGAAACGGCGATGCATCAGCGCAAGCGGT GA
Upstream 100 bases:
>100_bases CGGCCGTTGCCAGGCCTGTATATGCGCCGAAATGCTTACATGCGTCACACAAGCGCGCACCTATACTCCGGGGCTGTCCC ACCGAAGAGGTTCTGACCGC
Downstream 100 bases:
>100_bases TGAGTGCGCGCGGGCTGGCTGTTTCCTTCTCCCTGCGGGAGAAGGTGCCCGAAGGGCGGATGAGGGTACGAGCGAAGCCT CGTGTAGTTGGAACGACACA
Product: dicarboxylate transport protein
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSAPPSSPIAAGSGTAAGSLRRSVSNTLKGSAGNLVEWYDVYVYSVFATYFESQFFSKEDKNATMFVWAIFAMTFLMRPI GAWYFGRFADRYGRRLALTISVSVMALCSFVIAITPTVATIGIAAPIILLVARLLQGFATGGEYGTSATYMSEAAIPGRR GFLSSFHYVTLVGGHVLAQTTLLVMLHFFDASQVSEWGWRVAFGLGGIGALVVFWLRQTMDESLSSESIADSRTGKAKAS GSMRELFVNQWRPLLLCFLITAGGTIAFYTYSVTGPKMIQTAFAGGDVMAGTIINLVALTVLMLMQPVGGWLSDIVGRKT LLVFFGIGGVLYTWFLVMELPKQTDWLTAFVILTVGFVILTGYTSINAVVKAELFPTHVRALGVGLGYALANSAFGGTAP LLYQASLKTNQVTEFVIYATAVIAVSLVVYMFFLTNKGSNWLDDETAMHQRKR
Sequences:
>Translated_453_residues MSAPPSSPIAAGSGTAAGSLRRSVSNTLKGSAGNLVEWYDVYVYSVFATYFESQFFSKEDKNATMFVWAIFAMTFLMRPI GAWYFGRFADRYGRRLALTISVSVMALCSFVIAITPTVATIGIAAPIILLVARLLQGFATGGEYGTSATYMSEAAIPGRR GFLSSFHYVTLVGGHVLAQTTLLVMLHFFDASQVSEWGWRVAFGLGGIGALVVFWLRQTMDESLSSESIADSRTGKAKAS GSMRELFVNQWRPLLLCFLITAGGTIAFYTYSVTGPKMIQTAFAGGDVMAGTIINLVALTVLMLMQPVGGWLSDIVGRKT LLVFFGIGGVLYTWFLVMELPKQTDWLTAFVILTVGFVILTGYTSINAVVKAELFPTHVRALGVGLGYALANSAFGGTAP LLYQASLKTNQVTEFVIYATAVIAVSLVVYMFFLTNKGSNWLDDETAMHQRKR >Mature_452_residues SAPPSSPIAAGSGTAAGSLRRSVSNTLKGSAGNLVEWYDVYVYSVFATYFESQFFSKEDKNATMFVWAIFAMTFLMRPIG AWYFGRFADRYGRRLALTISVSVMALCSFVIAITPTVATIGIAAPIILLVARLLQGFATGGEYGTSATYMSEAAIPGRRG FLSSFHYVTLVGGHVLAQTTLLVMLHFFDASQVSEWGWRVAFGLGGIGALVVFWLRQTMDESLSSESIADSRTGKAKASG SMRELFVNQWRPLLLCFLITAGGTIAFYTYSVTGPKMIQTAFAGGDVMAGTIINLVALTVLMLMQPVGGWLSDIVGRKTL LVFFGIGGVLYTWFLVMELPKQTDWLTAFVILTVGFVILTGYTSINAVVKAELFPTHVRALGVGLGYALANSAFGGTAPL LYQASLKTNQVTEFVIYATAVIAVSLVVYMFFLTNKGSNWLDDETAMHQRKR
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=436, Percent_Identity=41.0550458715596, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI1790550, Length=382, Percent_Identity=27.4869109947644, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1788292, Length=395, Percent_Identity=28.8607594936709, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1789941, Length=386, Percent_Identity=30.3108808290155, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI87082231, Length=221, Percent_Identity=27.6018099547511, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87082404, Length=354, Percent_Identity=25.4237288135593, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 49119; Mature: 48988
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPPSSPIAAGSGTAAGSLRRSVSNTLKGSAGNLVEWYDVYVYSVFATYFESQFFSKED CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC KNATMFVWAIFAMTFLMRPIGAWYFGRFADRYGRRLALTISVSVMALCSFVIAITPTVAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHH IGIAAPIILLVARLLQGFATGGEYGTSATYMSEAAIPGRRGFLSSFHYVTLVGGHVLAQT HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHCCHHHHHCHHHHHHH TLLVMLHFFDASQVSEWGWRVAFGLGGIGALVVFWLRQTMDESLSSESIADSRTGKAKAS HHHHHHHHHCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCC GSMRELFVNQWRPLLLCFLITAGGTIAFYTYSVTGPKMIQTAFAGGDVMAGTIINLVALT CHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHH VLMLMQPVGGWLSDIVGRKTLLVFFGIGGVLYTWFLVMELPKQTDWLTAFVILTVGFVIL HHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TGYTSINAVVKAELFPTHVRALGVGLGYALANSAFGGTAPLLYQASLKTNQVTEFVIYAT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHH AVIAVSLVVYMFFLTNKGSNWLDDETAMHQRKR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC >Mature Secondary Structure SAPPSSPIAAGSGTAAGSLRRSVSNTLKGSAGNLVEWYDVYVYSVFATYFESQFFSKED CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC KNATMFVWAIFAMTFLMRPIGAWYFGRFADRYGRRLALTISVSVMALCSFVIAITPTVAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHH IGIAAPIILLVARLLQGFATGGEYGTSATYMSEAAIPGRRGFLSSFHYVTLVGGHVLAQT HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHCCHHHHHCHHHHHHH TLLVMLHFFDASQVSEWGWRVAFGLGGIGALVVFWLRQTMDESLSSESIADSRTGKAKAS HHHHHHHHHCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCC GSMRELFVNQWRPLLLCFLITAGGTIAFYTYSVTGPKMIQTAFAGGDVMAGTIINLVALT CHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHH VLMLMQPVGGWLSDIVGRKTLLVFFGIGGVLYTWFLVMELPKQTDWLTAFVILTVGFVIL HHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TGYTSINAVVKAELFPTHVRALGVGLGYALANSAFGGTAPLLYQASLKTNQVTEFVIYAT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHH AVIAVSLVVYMFFLTNKGSNWLDDETAMHQRKR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]