| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is folE [H]
Identifier: 21245014
GI number: 21245014
Start: 5088199
End: 5088813
Strand: Reverse
Name: folE [H]
Synonym: XAC4302
Alternate gene names: 21245014
Gene position: 5088813-5088199 (Counterclockwise)
Preceding gene: 21245020
Following gene: 21245013
Centisome position: 98.32
GC content: 65.53
Gene sequence:
>615_bases GTGAACCTGCGCATGAGCCAGTCCAACCAGCCCGATTCCCCCGTGACCCAGACCCAGGCCGAAGAGGCCGTGCGCACCCT GTTGCGCTGGGCGGGCGAAGATCCCACGCGTGAGGGCCTGCTGGACACACCGCGCCGGGTGGCCGAAGCCTACGGCGACT GGTTCAGCGGCTATCGGGACGAACCGCGCGAATACCTGGAACGCACGTTCGAGGAAGTGGCCGGCTACGACGAGTTGATC GTGCTGCGCGACATTTCCTACGAAAGCCATTGCGAGCACCACATGGCGCCGATCATCGGCAAGGTGCACGTGGGCTATCT GCCGCGTGGCAAGGTCGTCGGCATCAGCAAGCTGGCGCGCGTGGTGGAAAGCTATGCGCGCCGCTTCCAGGTGCAGGAAA AGATGACCGCGCAGATCGCCCAATGCATCCAGGACGTGCTGCAGCCGCTTGGCGTGGGCGTGGTGGTGGAAGGCGCGCAC GAGTGCATGACCACCCGCGGCATCCACAAGCGCGGCGTCAGCATGGTGACCTCCAAGATGCTGGGCAGCTTCCGCGAGGA CGCGCGCACCCGCGCCGAATTCCTGCAGTTCATCGAAGTGGGCGGCAAGCGTTGA
Upstream 100 bases:
>100_bases AATTCATAAATGAATCAGTAGTCACTGAATATCCGCATGCTGGCGCAACCGCCACTGGGGCGGCCGGGCAGTCCTCAGGT ACCATGCTCGCCCCCTTTGG
Downstream 100 bases:
>100_bases GGCAGTCGCGGCAGCGCCCATGAAGCACCAGGCCCGTATCGCCGGCTATCGGCAACTGCGCGAGCAGCCGGTATGGAAAC TGCTTGCCGCCGACCACGCA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MNLRMSQSNQPDSPVTQTQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYRDEPREYLERTFEEVAGYDELI VLRDISYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAH ECMTTRGIHKRGVSMVTSKMLGSFREDARTRAEFLQFIEVGGKR
Sequences:
>Translated_204_residues MNLRMSQSNQPDSPVTQTQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYRDEPREYLERTFEEVAGYDELI VLRDISYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAH ECMTTRGIHKRGVSMVTSKMLGSFREDARTRAEFLQFIEVGGKR >Mature_204_residues MNLRMSQSNQPDSPVTQTQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYRDEPREYLERTFEEVAGYDELI VLRDISYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLARVVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAH ECMTTRGIHKRGVSMVTSKMLGSFREDARTRAEFLQFIEVGGKR
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=177, Percent_Identity=50.2824858757062, Blast_Score=181, Evalue=4e-46, Organism=Homo sapiens, GI4503949, Length=177, Percent_Identity=50.2824858757062, Blast_Score=181, Evalue=4e-46, Organism=Homo sapiens, GI66932970, Length=158, Percent_Identity=43.6708860759494, Blast_Score=138, Evalue=4e-33, Organism=Homo sapiens, GI66932972, Length=137, Percent_Identity=48.9051094890511, Blast_Score=135, Evalue=3e-32, Organism=Escherichia coli, GI1788476, Length=175, Percent_Identity=36, Blast_Score=116, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17560486, Length=179, Percent_Identity=48.0446927374302, Blast_Score=183, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6321706, Length=178, Percent_Identity=51.685393258427, Blast_Score=184, Evalue=7e-48, Organism=Drosophila melanogaster, GI24656782, Length=176, Percent_Identity=48.2954545454545, Blast_Score=157, Evalue=3e-39, Organism=Drosophila melanogaster, GI24656796, Length=176, Percent_Identity=48.2954545454545, Blast_Score=157, Evalue=5e-39, Organism=Drosophila melanogaster, GI24656791, Length=176, Percent_Identity=48.2954545454545, Blast_Score=157, Evalue=5e-39,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 23141; Mature: 23141
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRMSQSNQPDSPVTQTQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYRD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC EPREYLERTFEEVAGYDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLAR CHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHH VVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAHECMTTRGIHKRGVSMVTSKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH LGSFREDARTRAEFLQFIEVGGKR HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNLRMSQSNQPDSPVTQTQAEEAVRTLLRWAGEDPTREGLLDTPRRVAEAYGDWFSGYRD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC EPREYLERTFEEVAGYDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRGKVVGISKLAR CHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHH VVESYARRFQVQEKMTAQIAQCIQDVLQPLGVGVVVEGAHECMTTRGIHKRGVSMVTSKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH LGSFREDARTRAEFLQFIEVGGKR HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]